RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 PIP4K2BP78356 416 aa10.21□□□□□ -0.77
LMBR1-204ENST00000415428 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.78
LMBR1-204ENST00000415428 BRINP3Q76B58 766 aa10.21□□□□□ -0.78
LMBR1-204ENST00000415428 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
LMBR1-204ENST00000415428 KIAA1210Q9ULL0 1709 aa10.19□□□□□ -0.78
LMBR1-204ENST00000415428 QRICH2Q9H0J4 1663 aa10.19□□□□□ -0.78
LMBR1-204ENST00000415428 IDI1Q13907 227 aa10.19□□□□□ -0.78
LMBR1-204ENST00000415428 SBNO1A3KN83 1393 aa10.18□□□□□ -0.78
LMBR1-204ENST00000415428 ANKARQ7Z5J8 1434 aa10.17□□□□□ -0.78
LMBR1-204ENST00000415428 CAMTA1Q9Y6Y1 1673 aa10.16□□□□□ -0.78
LMBR1-204ENST00000415428 ANKRD50Q9ULJ7 1429 aa10.15□□□□□ -0.78
LMBR1-204ENST00000415428 TSPY4P0CV99 314 aa10.15□□□□□ -0.78
LMBR1-204ENST00000415428 TSPY10P0CW01 314 aa10.15□□□□□ -0.78
LMBR1-204ENST00000415428 MAP3K5Q99683 1374 aa10.15□□□□□ -0.78
LMBR1-204ENST00000415428 LRRC59Q96AG4 307 aaKnown RBP10.15□□□□□ -0.78
LMBR1-204ENST00000415428 AFF2P51816 1311 aa10.14□□□□□ -0.79
LMBR1-204ENST00000415428 CICQ96RK0 1608 aaPredicted RBP10.14□□□□□ -0.79
LMBR1-204ENST00000415428 RPGRIP1LQ68CZ1 1315 aa10.13□□□□□ -0.79
LMBR1-204ENST00000415428 AATKQ6ZMQ8 1374 aa10.13□□□□□ -0.79
LMBR1-204ENST00000415428 CHD4Q14839 1912 aa10.12□□□□□ -0.79
LMBR1-204ENST00000415428 NINLQ9Y2I6 1382 aa10.12□□□□□ -0.79
LMBR1-204ENST00000415428 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
LMBR1-204ENST00000415428 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
LMBR1-204ENST00000415428 ARHGEF28Q8N1W1 1705 aaKnown RBP10.11□□□□□ -0.79
LMBR1-204ENST00000415428 COL18A1P39060 1754 aa10.11□□□□□ -0.79
LMBR1-204ENST00000415428 CCDC144AA2RUR9 1427 aa10.1□□□□□ -0.79
LMBR1-204ENST00000415428 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
LMBR1-204ENST00000415428 NRKQ7Z2Y5 1582 aa10.1□□□□□ -0.79
LMBR1-204ENST00000415428 ATP7BP35670 1465 aa10.09□□□□□ -0.79
LMBR1-204ENST00000415428 LRPPRCP42704 1394 aaKnown RBP10.09□□□□□ -0.79
LMBR1-204ENST00000415428 NHSQ6T4R5 1651 aa10.09□□□□□ -0.79
LMBR1-204ENST00000415428 LRRC37A3O60309 1634 aa10.08□□□□□ -0.8
LMBR1-204ENST00000415428 RGPD8O14715 1765 aaPredicted RBP10.08□□□□□ -0.8
LMBR1-204ENST00000415428 ADGRB1O14514 1584 aa10.07□□□□□ -0.8
LMBR1-204ENST00000415428 PIK3C2GO75747 1445 aa10.07□□□□□ -0.8
LMBR1-204ENST00000415428 TNS3Q68CZ2 1445 aa10.07□□□□□ -0.8
LMBR1-204ENST00000415428 SPATA31E1Q6ZUB1 1445 aa10.07□□□□□ -0.8
LMBR1-204ENST00000415428 METP08581 1390 aa10.07□□□□□ -0.8
LMBR1-204ENST00000415428 ABCC11Q96J66 1382 aa10.07□□□□□ -0.8
LMBR1-204ENST00000415428 BRD4O60885 1362 aaPredicted RBP10.06□□□□□ -0.8
LMBR1-204ENST00000415428 ZRANB1Q9UGI0 708 aa10.06□□□□□ -0.8
LMBR1-204ENST00000415428 SHANK3Q9BYB0 1731 aa10.05□□□□□ -0.8
LMBR1-204ENST00000415428 SLIT3O75094 1523 aa10.05□□□□□ -0.8
LMBR1-204ENST00000415428 VPS72Q15906 364 aa10.05□□□□□ -0.8
LMBR1-204ENST00000415428 CHIC1Q5VXU3 224 aa10.05□□□□□ -0.8
LMBR1-204ENST00000415428 AKAP12Q02952 1782 aa10.04□□□□□ -0.8
LMBR1-204ENST00000415428 MYOM1P52179 1685 aa10.03□□□□□ -0.8
LMBR1-204ENST00000415428 TULP4Q9NRJ4 1543 aa10.03□□□□□ -0.8
LMBR1-204ENST00000415428 FAM208AQ9UK61 1670 aaKnown RBP10.03□□□□□ -0.8
LMBR1-204ENST00000415428 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
LMBR1-204ENST00000415428 ACIN1Q9UKV3 1341 aaKnown RBP10.03□□□□□ -0.8
LMBR1-204ENST00000415428 ZNF831Q5JPB2 1677 aa10.03□□□□□ -0.8
LMBR1-204ENST00000415428 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.8
LMBR1-204ENST00000415428 PPP1R15AO75807 674 aaPredicted RBP10.02□□□□□ -0.81
LMBR1-204ENST00000415428 PLPPR3Q6T4P5 718 aa10.02□□□□□ -0.81
LMBR1-204ENST00000415428 UBTFP17480 764 aaKnown RBP10.01□□□□□ -0.81
LMBR1-204ENST00000415428 ROBO2Q9HCK4 1378 aa10.01□□□□□ -0.81
LMBR1-204ENST00000415428 QTRT2Q9H974 415 aaKnown RBP10.01□□□□□ -0.81
LMBR1-204ENST00000415428 LY75O60449 1722 aa10□□□□□ -0.81
LMBR1-204ENST00000415428 ARHGEF10O15013 1369 aa10□□□□□ -0.81
LMBR1-204ENST00000415428 NAIPQ13075 1403 aa9.99□□□□□ -0.81
LMBR1-204ENST00000415428 GJD4Q96KN9 370 aaPredicted RBP9.99□□□□□ -0.81
LMBR1-204ENST00000415428 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
LMBR1-204ENST00000415428 KIF13BQ9NQT8 1826 aa9.99□□□□□ -0.81
LMBR1-204ENST00000415428 SPATA31A3Q5VYP0 1347 aa9.99□□□□□ -0.81
LMBR1-204ENST00000415428 ATF3P18847 181 aa9.99□□□□□ -0.81
LMBR1-204ENST00000415428 AMOTL2Q9Y2J4 779 aa9.98□□□□□ -0.81
LMBR1-204ENST00000415428 NPHP3Q7Z494 1330 aa9.97□□□□□ -0.81
LMBR1-204ENST00000415428 UNC5CLQ8IV45 518 aa9.97□□□□□ -0.81
LMBR1-204ENST00000415428 TUBGCP6Q96RT7 1819 aa9.96□□□□□ -0.81
LMBR1-204ENST00000415428 CPDO75976 1380 aa9.96□□□□□ -0.82
LMBR1-204ENST00000415428 EIF3AQ14152 1382 aaKnown RBP9.96□□□□□ -0.82
LMBR1-204ENST00000415428 SCAF1Q9H7N4 1312 aaKnown RBP9.96□□□□□ -0.82
LMBR1-204ENST00000415428 PIK3C2AO00443 1686 aa9.94□□□□□ -0.82
LMBR1-204ENST00000415428 KIAA1551Q9HCM1 1747 aa9.94□□□□□ -0.82
LMBR1-204ENST00000415428 ANKRD30BQ9BXX2 1392 aa9.93□□□□□ -0.82
LMBR1-204ENST00000415428 HRCP23327 699 aa9.92□□□□□ -0.82
LMBR1-204ENST00000415428 DHX57Q6P158 1386 aaKnown RBP9.92□□□□□ -0.82
LMBR1-204ENST00000415428 USP21Q9UK80 565 aa9.92□□□□□ -0.82
LMBR1-204ENST00000415428 SLC26A8Q96RN1 970 aa9.92□□□□□ -0.82
LMBR1-204ENST00000415428 MEX3CQ5U5Q3 659 aaKnown RBP9.91□□□□□ -0.82
LMBR1-204ENST00000415428 POLR3AO14802 1390 aaPredicted RBP9.9□□□□□ -0.82
LMBR1-204ENST00000415428 IFFO2Q5TF58 517 aa9.9□□□□□ -0.82
LMBR1-204ENST00000415428 BARGINQ6ZT62 677 aa9.9□□□□□ -0.83
LMBR1-204ENST00000415428 CAMKK2Q96RR4 588 aa9.9□□□□□ -0.83
LMBR1-204ENST00000415428 MON2Q7Z3U7 1717 aa9.89□□□□□ -0.83
LMBR1-204ENST00000415428 SPATA31A5Q5VU36 1347 aa9.89□□□□□ -0.83
LMBR1-204ENST00000415428 SPATA31A7Q8IWB4 1347 aa9.89□□□□□ -0.83
LMBR1-204ENST00000415428 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
LMBR1-204ENST00000415428 C10orf71Q711Q0 1435 aa9.88□□□□□ -0.83
LMBR1-204ENST00000415428 YTHDC2Q9H6S0 1430 aaKnown RBP9.87□□□□□ -0.83
LMBR1-204ENST00000415428 TRIM52Q96A61 297 aa9.86□□□□□ -0.83
LMBR1-204ENST00000415428 USP19O94966 1318 aa9.85□□□□□ -0.83
LMBR1-204ENST00000415428 ADCY9O60503 1353 aa9.85□□□□□ -0.83
LMBR1-204ENST00000415428 SSH2Q76I76 1423 aa9.85□□□□□ -0.83
LMBR1-204ENST00000415428 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
LMBR1-204ENST00000415428 THRAP3Q9Y2W1 955 aaKnown RBP9.84□□□□□ -0.83
LMBR1-204ENST00000415428 NUP155O75694 1391 aa9.84□□□□□ -0.83
LMBR1-204ENST00000415428 PLEKHG2Q9H7P9 1386 aa9.84□□□□□ -0.83
LMBR1-204ENST00000415428 SGIP1Q9BQI5 828 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms