RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
CRAMP1-203ENST00000415022 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
CRAMP1-203ENST00000415022 USP32Q8NFA0 1604 aa15.23■□□□□ 0.03
CRAMP1-203ENST00000415022 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
CRAMP1-203ENST00000415022 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
CRAMP1-203ENST00000415022 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
CRAMP1-203ENST00000415022 SRCAPQ6ZRS2 3230 aa15.22■□□□□ 0.03
CRAMP1-203ENST00000415022 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
CRAMP1-203ENST00000415022 TRAK1Q9UPV9 953 aa15.22■□□□□ 0.03
CRAMP1-203ENST00000415022 MST1RQ04912 1400 aa15.22■□□□□ 0.03
CRAMP1-203ENST00000415022 CDC42BPGQ6DT37 1551 aa15.22■□□□□ 0.03
CRAMP1-203ENST00000415022 RALGAPBQ86X10 1494 aa15.21■□□□□ 0.03
CRAMP1-203ENST00000415022 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.02
CRAMP1-203ENST00000415022 ADGRB2O60241 1585 aa15.2■□□□□ 0.02
CRAMP1-203ENST00000415022 QRICH2Q9H0J4 1663 aa15.2■□□□□ 0.02
CRAMP1-203ENST00000415022 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
CRAMP1-203ENST00000415022 C19orf44Q9H6X5 657 aa15.2■□□□□ 0.02
CRAMP1-203ENST00000415022 MSH6P52701 1360 aa15.2■□□□□ 0.02
CRAMP1-203ENST00000415022 DCCP43146 1447 aa15.19■□□□□ 0.02
CRAMP1-203ENST00000415022 SAFB2Q14151 953 aaKnown RBP eCLIP15.19■□□□□ 0.02
CRAMP1-203ENST00000415022 SIRT1Q96EB6 747 aa15.19■□□□□ 0.02
CRAMP1-203ENST00000415022 C1orf167Q5SNV9 1468 aa15.16■□□□□ 0.02
CRAMP1-203ENST00000415022 SLAIN2Q9P270 581 aa15.16■□□□□ 0.02
CRAMP1-203ENST00000415022 NHSL1Q5SYE7 1610 aa15.16■□□□□ 0.02
CRAMP1-203ENST00000415022 C14orf37Q86TY3 774 aa15.15■□□□□ 0.02
CRAMP1-203ENST00000415022 COL16A1Q07092 1604 aaPredicted RBP15.14■□□□□ 0.01
CRAMP1-203ENST00000415022 ROCK2O75116 1388 aaKnown RBP15.14■□□□□ 0.01
CRAMP1-203ENST00000415022 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
CRAMP1-203ENST00000415022 HIRIP3Q9BW71 556 aaPredicted RBP15.14■□□□□ 0.01
CRAMP1-203ENST00000415022 DDX17Q92841 729 aaKnown RBP15.13■□□□□ 0.01
CRAMP1-203ENST00000415022 MINK1Q8N4C8 1332 aaPredicted RBP15.13■□□□□ 0.01
CRAMP1-203ENST00000415022 PRR36Q9H6K5 1346 aa15.13■□□□□ 0.01
CRAMP1-203ENST00000415022 TOPAZ1Q8N9V7 1692 aa15.12■□□□□ 0.01
CRAMP1-203ENST00000415022 PHLPP1O60346 1717 aa15.12■□□□□ 0.01
CRAMP1-203ENST00000415022 NUTM2FA1L443 756 aa15.12■□□□□ 0.01
CRAMP1-203ENST00000415022 BRINP3Q76B58 766 aa15.12■□□□□ 0.01
CRAMP1-203ENST00000415022 ORAI2Q96SN7 254 aa15.12■□□□□ 0.01
CRAMP1-203ENST00000415022 AHDC1Q5TGY3 1603 aaPredicted RBP15.11■□□□□ 0.01
CRAMP1-203ENST00000415022 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
CRAMP1-203ENST00000415022 ATF3P18847 181 aa15.1■□□□□ 0.01
CRAMP1-203ENST00000415022 ATP7BP35670 1465 aa15.09■□□□□ 0.01
CRAMP1-203ENST00000415022 POGKQ9P215 609 aa15.09■□□□□ 0.01
CRAMP1-203ENST00000415022 TIMELESSQ9UNS1 1208 aa15.08■□□□□ 0
CRAMP1-203ENST00000415022 ZNF772Q68DY9 489 aaPredicted RBP15.07■□□□□ 0
CRAMP1-203ENST00000415022 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
CRAMP1-203ENST00000415022 WASLO00401 505 aaPredicted RBP15.06■□□□□ 0
CRAMP1-203ENST00000415022 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
CRAMP1-203ENST00000415022 PXDNQ92626 1479 aa15.06■□□□□ 0
CRAMP1-203ENST00000415022 TESK2Q96S53 571 aa15.05■□□□□ -0
CRAMP1-203ENST00000415022 TRPM3Q9HCF6 1732 aaPredicted RBP15.05■□□□□ -0
CRAMP1-203ENST00000415022 ITSN1Q15811 1721 aa15.04■□□□□ -0
CRAMP1-203ENST00000415022 KIF1AQ12756 1690 aa15.04■□□□□ -0
CRAMP1-203ENST00000415022 JCADQ9P266 1359 aa15.03■□□□□ -0
CRAMP1-203ENST00000415022 RXRBP28702 533 aa15.03■□□□□ -0
CRAMP1-203ENST00000415022 CDK19Q9BWU1 502 aa15.03■□□□□ -0
CRAMP1-203ENST00000415022 ANKARQ7Z5J8 1434 aa15.02■□□□□ -0
CRAMP1-203ENST00000415022 USP47Q96K76 1375 aa15.01□□□□□ -0.01
CRAMP1-203ENST00000415022 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
CRAMP1-203ENST00000415022 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
CRAMP1-203ENST00000415022 ESCO1Q5FWF5 840 aa15.01□□□□□ -0.01
CRAMP1-203ENST00000415022 CABP2Q9NPB3 220 aa15.01□□□□□ -0.01
CRAMP1-203ENST00000415022 SBNO2Q9Y2G9 1366 aa15□□□□□ -0.01
CRAMP1-203ENST00000415022 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
CRAMP1-203ENST00000415022 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 AKAP12Q02952 1782 aa14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 FOXO3O43524 673 aa14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 PMFBP1Q8TBY8 1022 aa14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 NUDT16Q96DE0 195 aaKnown RBP14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 CDK12Q9NYV4 1490 aaPredicted RBP14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 ALS2Q96Q42 1657 aa14.99□□□□□ -0.01
CRAMP1-203ENST00000415022 CRYBG1Q9Y4K1 1723 aa14.98□□□□□ -0.01
CRAMP1-203ENST00000415022 MYOM1P52179 1685 aa14.98□□□□□ -0.01
CRAMP1-203ENST00000415022 LRP6O75581 1613 aa14.98□□□□□ -0.01
CRAMP1-203ENST00000415022 PHF8Q9UPP1 1060 aa14.97□□□□□ -0.01
CRAMP1-203ENST00000415022 ABCA3Q99758 1704 aa14.97□□□□□ -0.01
CRAMP1-203ENST00000415022 MARF1Q9Y4F3 1742 aaKnown RBP14.97□□□□□ -0.01
CRAMP1-203ENST00000415022 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
CRAMP1-203ENST00000415022 SPATA31A6Q5VVP1 1343 aa14.96□□□□□ -0.01
CRAMP1-203ENST00000415022 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
CRAMP1-203ENST00000415022 COL22A1Q8NFW1 1626 aaPredicted RBP14.96□□□□□ -0.01
CRAMP1-203ENST00000415022 MEX3CQ5U5Q3 659 aaKnown RBP14.96□□□□□ -0.01
CRAMP1-203ENST00000415022 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
CRAMP1-203ENST00000415022 PNPLA6Q8IY17 1366 aa14.95□□□□□ -0.02
CRAMP1-203ENST00000415022 NRKQ7Z2Y5 1582 aa14.94□□□□□ -0.02
CRAMP1-203ENST00000415022 PPIP5K1Q6PFW1 1433 aa14.94□□□□□ -0.02
CRAMP1-203ENST00000415022 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
CRAMP1-203ENST00000415022 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
CRAMP1-203ENST00000415022 C11orf95C9JLR9 678 aaPredicted RBP14.93□□□□□ -0.02
CRAMP1-203ENST00000415022 HSPA5P11021 654 aaKnown RBP14.93□□□□□ -0.02
CRAMP1-203ENST00000415022 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
CRAMP1-203ENST00000415022 SRPK2P78362 688 aaKnown RBP14.92□□□□□ -0.02
CRAMP1-203ENST00000415022 ACEP12821 1306 aa14.92□□□□□ -0.02
CRAMP1-203ENST00000415022 EVC2Q86UK5 1308 aa14.92□□□□□ -0.02
CRAMP1-203ENST00000415022 KRT28Q7Z3Y7 464 aa14.91□□□□□ -0.02
CRAMP1-203ENST00000415022 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
CRAMP1-203ENST00000415022 SSH2Q76I76 1423 aa14.91□□□□□ -0.02
CRAMP1-203ENST00000415022 NPHP3Q7Z494 1330 aa14.91□□□□□ -0.02
CRAMP1-203ENST00000415022 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
CRAMP1-203ENST00000415022 CPSF1Q10570 1443 aaKnown RBP14.9□□□□□ -0.02
CRAMP1-203ENST00000415022 PIK3C2AO00443 1686 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms