RNA–Protein interactions for RNA: ENST00000412908.6

PSMA3-202, Transcript of proteasome subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene PSMA3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-202ENST00000412908 SPSB2Q99619 263 aa11.83□□□□□ -0.52
PSMA3-202ENST00000412908 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
PSMA3-202ENST00000412908 RNF19BQ6ZMZ0 732 aa11.82□□□□□ -0.52
PSMA3-202ENST00000412908 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
PSMA3-202ENST00000412908 Q3C1V9 767 aa11.81□□□□□ -0.52
PSMA3-202ENST00000412908 MYSM1Q5VVJ2 828 aa11.81□□□□□ -0.52
PSMA3-202ENST00000412908 RIC3Q7Z5B4 369 aa11.81□□□□□ -0.52
PSMA3-202ENST00000412908 SYMPKQ92797 1274 aaKnown RBP11.81□□□□□ -0.52
PSMA3-202ENST00000412908 POLR3EQ9NVU0 708 aa11.81□□□□□ -0.52
PSMA3-202ENST00000412908 PCDHGC3Q9UN70 934 aa11.81□□□□□ -0.52
PSMA3-202ENST00000412908 ADH1BP00325 375 aa11.8□□□□□ -0.52
PSMA3-202ENST00000412908 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
PSMA3-202ENST00000412908 BRICD5Q6PL45 260 aa11.8□□□□□ -0.52
PSMA3-202ENST00000412908 THAP11Q96EK4 314 aa11.8□□□□□ -0.52
PSMA3-202ENST00000412908 RSPH6AQ9H0K4 717 aa11.8□□□□□ -0.52
PSMA3-202ENST00000412908 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
PSMA3-202ENST00000412908 RSBN1LQ6PCB5 846 aaPredicted RBP11.79□□□□□ -0.52
PSMA3-202ENST00000412908 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
PSMA3-202ENST00000412908 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
PSMA3-202ENST00000412908 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
PSMA3-202ENST00000412908 A0A0G2JS52 829 aa11.77□□□□□ -0.53
PSMA3-202ENST00000412908 SPTLC1O15269 473 aa11.77□□□□□ -0.53
PSMA3-202ENST00000412908 PPP1R18Q6NYC8 613 aa11.77□□□□□ -0.53
PSMA3-202ENST00000412908 LIMD1Q9UGP4 676 aa11.77□□□□□ -0.53
PSMA3-202ENST00000412908 S1PR4O95977 384 aa11.76□□□□□ -0.53
PSMA3-202ENST00000412908 SLC6A16Q9GZN6 736 aa11.76□□□□□ -0.53
PSMA3-202ENST00000412908 FAM160A2Q8N612 972 aaPredicted RBP11.75□□□□□ -0.53
PSMA3-202ENST00000412908 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
PSMA3-202ENST00000412908 GGCXP38435 758 aa11.74□□□□□ -0.53
PSMA3-202ENST00000412908 CLK2P49760 499 aaKnown RBP11.74□□□□□ -0.53
PSMA3-202ENST00000412908 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
PSMA3-202ENST00000412908 GJA5P36382 358 aa11.73□□□□□ -0.53
PSMA3-202ENST00000412908 ERCC6Q03468 1493 aa11.73□□□□□ -0.53
PSMA3-202ENST00000412908 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
PSMA3-202ENST00000412908 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
PSMA3-202ENST00000412908 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
PSMA3-202ENST00000412908 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
PSMA3-202ENST00000412908 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
PSMA3-202ENST00000412908 MTMR2Q13614 643 aa11.71□□□□□ -0.53
PSMA3-202ENST00000412908 PROCA1Q8NCQ7 364 aaPredicted RBP11.71□□□□□ -0.53
PSMA3-202ENST00000412908 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
PSMA3-202ENST00000412908 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
PSMA3-202ENST00000412908 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
PSMA3-202ENST00000412908 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
PSMA3-202ENST00000412908 RETREG3Q86VR2 466 aa11.7□□□□□ -0.54
PSMA3-202ENST00000412908 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
PSMA3-202ENST00000412908 HRCP23327 699 aa11.69□□□□□ -0.54
PSMA3-202ENST00000412908 QPCTQ16769 361 aa11.69□□□□□ -0.54
PSMA3-202ENST00000412908 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
PSMA3-202ENST00000412908 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
PSMA3-202ENST00000412908 PRR7Q8TB68 274 aa11.67□□□□□ -0.54
PSMA3-202ENST00000412908 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
PSMA3-202ENST00000412908 PRPF38BQ5VTL8 546 aaKnown RBP11.66□□□□□ -0.54
PSMA3-202ENST00000412908 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
PSMA3-202ENST00000412908 LILRB3O75022 631 aa11.65□□□□□ -0.54
PSMA3-202ENST00000412908 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.54
PSMA3-202ENST00000412908 TSC1Q92574 1164 aa11.65□□□□□ -0.54
PSMA3-202ENST00000412908 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
PSMA3-202ENST00000412908 FCF1Q9Y324 198 aaKnown RBP11.64□□□□□ -0.55
PSMA3-202ENST00000412908 JUNDP17535 347 aa11.63□□□□□ -0.55
PSMA3-202ENST00000412908 ANKLE1Q8NAG6 615 aa11.63□□□□□ -0.55
PSMA3-202ENST00000412908 CFAP99D6REC4 459 aa11.62□□□□□ -0.55
PSMA3-202ENST00000412908 DXOO77932 396 aaKnown RBP11.62□□□□□ -0.55
PSMA3-202ENST00000412908 MMP16P51512 607 aa11.62□□□□□ -0.55
PSMA3-202ENST00000412908 CCDC24Q8N4L8 307 aa11.62□□□□□ -0.55
PSMA3-202ENST00000412908 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
PSMA3-202ENST00000412908 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
PSMA3-202ENST00000412908 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
PSMA3-202ENST00000412908 NCAPD3P42695 1498 aa11.59□□□□□ -0.55
PSMA3-202ENST00000412908 PLA2G2CQ5R387 149 aa11.59□□□□□ -0.55
PSMA3-202ENST00000412908 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
PSMA3-202ENST00000412908 SLC19A1P41440 591 aa11.56□□□□□ -0.56
PSMA3-202ENST00000412908 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
PSMA3-202ENST00000412908 DESI1Q6ICB0 168 aa11.55□□□□□ -0.56
PSMA3-202ENST00000412908 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
PSMA3-202ENST00000412908 RGS20O76081 388 aa11.54□□□□□ -0.56
PSMA3-202ENST00000412908 PPP2R2DQ66LE6 453 aa11.54□□□□□ -0.56
PSMA3-202ENST00000412908 HELBQ8NG08 1087 aaPredicted RBP11.54□□□□□ -0.56
PSMA3-202ENST00000412908 EMID1Q96A84 441 aaPredicted RBP11.54□□□□□ -0.56
PSMA3-202ENST00000412908 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
PSMA3-202ENST00000412908 ZBTB24O43167 697 aaPredicted RBP11.53□□□□□ -0.56
PSMA3-202ENST00000412908 AP1G2O75843 785 aa11.53□□□□□ -0.56
PSMA3-202ENST00000412908 PTPRNQ16849 979 aa11.53□□□□□ -0.56
PSMA3-202ENST00000412908 LYPD8Q6UX82 237 aa11.53□□□□□ -0.56
PSMA3-202ENST00000412908 CCNYL3P0C7X3 344 aa11.52□□□□□ -0.57
PSMA3-202ENST00000412908 RFC5P40937 340 aa11.52□□□□□ -0.57
PSMA3-202ENST00000412908 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
PSMA3-202ENST00000412908 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.57
PSMA3-202ENST00000412908 NESP48681 1621 aa11.52□□□□□ -0.57
PSMA3-202ENST00000412908 V9GY48 417 aaPredicted RBP11.51□□□□□ -0.57
PSMA3-202ENST00000412908 CTHP32929 405 aa11.5□□□□□ -0.57
PSMA3-202ENST00000412908 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
PSMA3-202ENST00000412908 EVA1BQ9NVM1 165 aa11.49□□□□□ -0.57
PSMA3-202ENST00000412908 ATAD2BQ9ULI0 1458 aa11.49□□□□□ -0.57
PSMA3-202ENST00000412908 SPRYD7Q5W111 196 aa11.48□□□□□ -0.57
PSMA3-202ENST00000412908 HMGXB3Q12766 1538 aa11.47□□□□□ -0.57
PSMA3-202ENST00000412908 CD2BP2O95400 341 aaKnown RBP11.47□□□□□ -0.57
PSMA3-202ENST00000412908 RPIAP49247 311 aa11.47□□□□□ -0.57
PSMA3-202ENST00000412908 KCNH2Q12809 1159 aa11.47□□□□□ -0.57
PSMA3-202ENST00000412908 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms