RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 FMNL1O95466 1100 aaPredicted RBP9.69□□□□□ -0.86
LINC00342-201ENST00000412393 FAM161AQ3B820 660 aa9.69□□□□□ -0.86
LINC00342-201ENST00000412393 PUS10Q3MIT2 529 aaKnown RBP9.69□□□□□ -0.86
LINC00342-201ENST00000412393 MORN1Q5T089 497 aa9.69□□□□□ -0.86
LINC00342-201ENST00000412393 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
LINC00342-201ENST00000412393 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
LINC00342-201ENST00000412393 ZBTB24O43167 697 aaPredicted RBP9.68□□□□□ -0.86
LINC00342-201ENST00000412393 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
LINC00342-201ENST00000412393 NFX1Q12986 1120 aaKnown RBP9.68□□□□□ -0.86
LINC00342-201ENST00000412393 KCNV2Q8TDN2 545 aa9.67□□□□□ -0.86
LINC00342-201ENST00000412393 DAXXQ9UER7 740 aaPredicted RBP9.67□□□□□ -0.86
LINC00342-201ENST00000412393 DACH1Q9UI36 760 aa9.67□□□□□ -0.86
LINC00342-201ENST00000412393 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
LINC00342-201ENST00000412393 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
LINC00342-201ENST00000412393 CADPSQ9ULU8 1353 aa9.66□□□□□ -0.86
LINC00342-201ENST00000412393 TTC24A2A3L6 582 aaPredicted RBP9.66□□□□□ -0.86
LINC00342-201ENST00000412393 P3H3Q8IVL6 736 aa9.66□□□□□ -0.86
LINC00342-201ENST00000412393 SENP2Q9HC62 589 aa9.66□□□□□ -0.86
LINC00342-201ENST00000412393 TOP2AP11388 1531 aaKnown RBP9.66□□□□□ -0.86
LINC00342-201ENST00000412393 WNT7AO00755 349 aa9.65□□□□□ -0.86
LINC00342-201ENST00000412393 SULF1Q8IWU6 871 aa9.65□□□□□ -0.86
LINC00342-201ENST00000412393 MSS51Q4VC12 460 aa9.64□□□□□ -0.87
LINC00342-201ENST00000412393 FUT2Q10981 343 aa9.63□□□□□ -0.87
LINC00342-201ENST00000412393 GRIPAP1Q4V328 841 aa9.63□□□□□ -0.87
LINC00342-201ENST00000412393 RDH13Q8NBN7 331 aa9.63□□□□□ -0.87
LINC00342-201ENST00000412393 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
LINC00342-201ENST00000412393 FAM160A2Q8N612 972 aaPredicted RBP9.62□□□□□ -0.87
LINC00342-201ENST00000412393 REPIN1Q9BWE0 567 aaKnown RBP9.62□□□□□ -0.87
LINC00342-201ENST00000412393 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
LINC00342-201ENST00000412393 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
LINC00342-201ENST00000412393 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
LINC00342-201ENST00000412393 TRIM47Q96LD4 638 aa9.61□□□□□ -0.87
LINC00342-201ENST00000412393 ATP13A2Q9NQ11 1180 aa9.61□□□□□ -0.87
LINC00342-201ENST00000412393 SLC27A5Q9Y2P5 690 aa9.61□□□□□ -0.87
LINC00342-201ENST00000412393 TERTO14746 1132 aaKnown RBP9.6□□□□□ -0.87
LINC00342-201ENST00000412393 GCGRP47871 477 aa9.6□□□□□ -0.87
LINC00342-201ENST00000412393 FAM181BA6NEQ2 426 aa9.59□□□□□ -0.87
LINC00342-201ENST00000412393 SMPD1P17405 629 aa9.58□□□□□ -0.88
LINC00342-201ENST00000412393 Q3C1V9 767 aa9.58□□□□□ -0.88
LINC00342-201ENST00000412393 PRDM2Q13029 1718 aa9.58□□□□□ -0.88
LINC00342-201ENST00000412393 CFTRP13569 1480 aa9.58□□□□□ -0.88
LINC00342-201ENST00000412393 MRC2Q9UBG0 1479 aa9.58□□□□□ -0.88
LINC00342-201ENST00000412393 DDX11L8A8MPP1 907 aa9.57□□□□□ -0.88
LINC00342-201ENST00000412393 GNPATO15228 680 aa9.57□□□□□ -0.88
LINC00342-201ENST00000412393 TRIM32Q13049 653 aa9.57□□□□□ -0.88
LINC00342-201ENST00000412393 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
LINC00342-201ENST00000412393 CEP164Q9UPV0 1460 aa9.57□□□□□ -0.88
LINC00342-201ENST00000412393 FANCD2Q9BXW9 1451 aa9.56□□□□□ -0.88
LINC00342-201ENST00000412393 WDR62O43379 1518 aa9.56□□□□□ -0.88
LINC00342-201ENST00000412393 MMP16P51512 607 aa9.55□□□□□ -0.88
LINC00342-201ENST00000412393 CCDC88BA6NC98 1476 aa9.53□□□□□ -0.88
LINC00342-201ENST00000412393 SNRPBP14678 240 aaKnown RBP9.53□□□□□ -0.88
LINC00342-201ENST00000412393 SLC16A10Q8TF71 515 aa9.53□□□□□ -0.88
LINC00342-201ENST00000412393 MRGPRX2Q96LB1 330 aa9.53□□□□□ -0.88
LINC00342-201ENST00000412393 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
LINC00342-201ENST00000412393 SEMA3EO15041 775 aa9.52□□□□□ -0.89
LINC00342-201ENST00000412393 FECHP22830 423 aa9.52□□□□□ -0.89
LINC00342-201ENST00000412393 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
LINC00342-201ENST00000412393 WNT7BP56706 349 aa9.5□□□□□ -0.89
LINC00342-201ENST00000412393 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
LINC00342-201ENST00000412393 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
LINC00342-201ENST00000412393 URB2Q14146 1524 aaKnown RBP9.48□□□□□ -0.89
LINC00342-201ENST00000412393 J3QL48 77 aa9.48□□□□□ -0.89
LINC00342-201ENST00000412393 DXOO77932 396 aaKnown RBP9.48□□□□□ -0.89
LINC00342-201ENST00000412393 USB1Q9BQ65 265 aaKnown RBP9.47□□□□□ -0.89
LINC00342-201ENST00000412393 TESPA1A2RU30 521 aaPredicted RBP9.46□□□□□ -0.9
LINC00342-201ENST00000412393 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
LINC00342-201ENST00000412393 HPS1Q92902 700 aa9.46□□□□□ -0.9
LINC00342-201ENST00000412393 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
LINC00342-201ENST00000412393 RC3H1Q5TC82 1133 aaKnown RBP9.45□□□□□ -0.9
LINC00342-201ENST00000412393 GPR37O15354 613 aa9.44□□□□□ -0.9
LINC00342-201ENST00000412393 USP46P62068 366 aa9.44□□□□□ -0.9
LINC00342-201ENST00000412393 IRF7Q92985 503 aa9.44□□□□□ -0.9
LINC00342-201ENST00000412393 RBM26Q5T8P6 1007 aaKnown RBP9.43□□□□□ -0.9
LINC00342-201ENST00000412393 ZSCAN1Q8NBB4 408 aa9.41□□□□□ -0.9
LINC00342-201ENST00000412393 KDM4AO75164 1064 aa9.4□□□□□ -0.9
LINC00342-201ENST00000412393 CD46P15529 392 aa9.4□□□□□ -0.9
LINC00342-201ENST00000412393 PHOX2BQ99453 314 aa9.4□□□□□ -0.9
LINC00342-201ENST00000412393 ABCC8Q09428 1581 aa9.4□□□□□ -0.9
LINC00342-201ENST00000412393 TOPBP1Q92547 1522 aa9.4□□□□□ -0.91
LINC00342-201ENST00000412393 DNMBPQ6XZF7 1577 aa9.38□□□□□ -0.91
LINC00342-201ENST00000412393 ALDH1A1P00352 501 aa9.38□□□□□ -0.91
LINC00342-201ENST00000412393 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
LINC00342-201ENST00000412393 IFT140Q96RY7 1462 aa9.37□□□□□ -0.91
LINC00342-201ENST00000412393 SUPT5HO00267 1087 aaKnown RBP9.37□□□□□ -0.91
LINC00342-201ENST00000412393 SKOR1P84550 965 aa9.37□□□□□ -0.91
LINC00342-201ENST00000412393 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
LINC00342-201ENST00000412393 H3BM21 787 aa9.35□□□□□ -0.91
LINC00342-201ENST00000412393 GMPRP36959 345 aa9.35□□□□□ -0.91
LINC00342-201ENST00000412393 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
LINC00342-201ENST00000412393 CAPN5O15484 640 aaPredicted RBP9.34□□□□□ -0.91
LINC00342-201ENST00000412393 SIAH2O43255 324 aa9.34□□□□□ -0.91
LINC00342-201ENST00000412393 JUNDP17535 347 aa9.34□□□□□ -0.91
LINC00342-201ENST00000412393 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
LINC00342-201ENST00000412393 WASF2Q9Y6W5 498 aa9.34□□□□□ -0.91
LINC00342-201ENST00000412393 ZNF608Q9ULD9 1512 aaPredicted RBP9.33□□□□□ -0.92
LINC00342-201ENST00000412393 LOC100996750A0A140TA64 210 aa9.33□□□□□ -0.92
LINC00342-201ENST00000412393 KRTAP4-6Q9BYQ5 205 aa9.33□□□□□ -0.92
LINC00342-201ENST00000412393 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
LINC00342-201ENST00000412393 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms