RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 UBAP1LF5GYI3 381 aa11.81□□□□□ -0.52
RPE-204ENST00000411934 CADPS2Q86UW7 1296 aa11.81□□□□□ -0.52
RPE-204ENST00000411934 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
RPE-204ENST00000411934 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
RPE-204ENST00000411934 RALGAPBQ86X10 1494 aa11.8□□□□□ -0.52
RPE-204ENST00000411934 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
RPE-204ENST00000411934 MST1RQ04912 1400 aa11.77□□□□□ -0.52
RPE-204ENST00000411934 ATF3P18847 181 aa11.77□□□□□ -0.53
RPE-204ENST00000411934 TMEM132EQ6IEE7 984 aa11.77□□□□□ -0.53
RPE-204ENST00000411934 EIF3AQ14152 1382 aaKnown RBP11.77□□□□□ -0.53
RPE-204ENST00000411934 ROBO1Q9Y6N7 1651 aa11.76□□□□□ -0.53
RPE-204ENST00000411934 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
RPE-204ENST00000411934 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
RPE-204ENST00000411934 ROCK2O75116 1388 aaKnown RBP11.76□□□□□ -0.53
RPE-204ENST00000411934 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
RPE-204ENST00000411934 CCER1Q8TC90 406 aaPredicted RBP11.75□□□□□ -0.53
RPE-204ENST00000411934 ILDR1Q86SU0 546 aaPredicted RBP11.74□□□□□ -0.53
RPE-204ENST00000411934 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
RPE-204ENST00000411934 STK26Q9P289 416 aa11.74□□□□□ -0.53
RPE-204ENST00000411934 ANKARQ7Z5J8 1434 aa11.74□□□□□ -0.53
RPE-204ENST00000411934 C1orf167Q5SNV9 1468 aa11.73□□□□□ -0.53
RPE-204ENST00000411934 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
RPE-204ENST00000411934 PLEKHH1Q9ULM0 1364 aa11.73□□□□□ -0.53
RPE-204ENST00000411934 SBNO2Q9Y2G9 1366 aa11.73□□□□□ -0.53
RPE-204ENST00000411934 KIF1AQ12756 1690 aa11.72□□□□□ -0.53
RPE-204ENST00000411934 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
RPE-204ENST00000411934 RBM33Q96EV2 1170 aaKnown RBP11.72□□□□□ -0.53
RPE-204ENST00000411934 POGKQ9P215 609 aa11.72□□□□□ -0.53
RPE-204ENST00000411934 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
RPE-204ENST00000411934 TULP4Q9NRJ4 1543 aa11.71□□□□□ -0.53
RPE-204ENST00000411934 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
RPE-204ENST00000411934 NBPF8Q3BBV2 869 aa11.71□□□□□ -0.53
RPE-204ENST00000411934 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.53
RPE-204ENST00000411934 QRICH2Q9H0J4 1663 aa11.71□□□□□ -0.54
RPE-204ENST00000411934 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
RPE-204ENST00000411934 ITSN1Q15811 1721 aa11.7□□□□□ -0.54
RPE-204ENST00000411934 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
RPE-204ENST00000411934 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
RPE-204ENST00000411934 PHLPP1O60346 1717 aa11.69□□□□□ -0.54
RPE-204ENST00000411934 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
RPE-204ENST00000411934 BRINP3Q76B58 766 aa11.68□□□□□ -0.54
RPE-204ENST00000411934 CARD11Q9BXL7 1154 aa11.67□□□□□ -0.54
RPE-204ENST00000411934 ATP7BP35670 1465 aa11.67□□□□□ -0.54
RPE-204ENST00000411934 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
RPE-204ENST00000411934 USP32Q8NFA0 1604 aa11.67□□□□□ -0.54
RPE-204ENST00000411934 WASLO00401 505 aaPredicted RBP11.66□□□□□ -0.54
RPE-204ENST00000411934 SHPRHQ149N8 1683 aa11.65□□□□□ -0.54
RPE-204ENST00000411934 NPHP3Q7Z494 1330 aa11.65□□□□□ -0.54
RPE-204ENST00000411934 HSPA1LP34931 641 aa11.65□□□□□ -0.54
RPE-204ENST00000411934 SAFB2Q14151 953 aaKnown RBP eCLIP11.64□□□□□ -0.55
RPE-204ENST00000411934 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
RPE-204ENST00000411934 JCADQ9P266 1359 aa11.63□□□□□ -0.55
RPE-204ENST00000411934 PXDNQ92626 1479 aa11.63□□□□□ -0.55
RPE-204ENST00000411934 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
RPE-204ENST00000411934 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
RPE-204ENST00000411934 PUS7Q96PZ0 661 aaKnown RBP11.62□□□□□ -0.55
RPE-204ENST00000411934 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
RPE-204ENST00000411934 USP47Q96K76 1375 aa11.62□□□□□ -0.55
RPE-204ENST00000411934 RGPD8O14715 1765 aaPredicted RBP11.62□□□□□ -0.55
RPE-204ENST00000411934 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
RPE-204ENST00000411934 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
RPE-204ENST00000411934 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
RPE-204ENST00000411934 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
RPE-204ENST00000411934 POLR3AO14802 1390 aaPredicted RBP11.6□□□□□ -0.55
RPE-204ENST00000411934 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
RPE-204ENST00000411934 HIRIP3Q9BW71 556 aaPredicted RBP11.6□□□□□ -0.55
RPE-204ENST00000411934 CDK19Q9BWU1 502 aa11.6□□□□□ -0.55
RPE-204ENST00000411934 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
RPE-204ENST00000411934 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
RPE-204ENST00000411934 PRR36Q9H6K5 1346 aa11.6□□□□□ -0.55
RPE-204ENST00000411934 SBNO1A3KN83 1393 aa11.59□□□□□ -0.55
RPE-204ENST00000411934 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
RPE-204ENST00000411934 CCDC61Q9Y6R9 512 aa11.59□□□□□ -0.55
RPE-204ENST00000411934 TRPM3Q9HCF6 1732 aaPredicted RBP11.58□□□□□ -0.56
RPE-204ENST00000411934 PLEKHG3A1L390 1219 aa11.58□□□□□ -0.56
RPE-204ENST00000411934 NUDT16Q96DE0 195 aaKnown RBP11.58□□□□□ -0.56
RPE-204ENST00000411934 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
RPE-204ENST00000411934 PSME1Q06323 249 aa11.57□□□□□ -0.56
RPE-204ENST00000411934 TESK2Q96S53 571 aa11.57□□□□□ -0.56
RPE-204ENST00000411934 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
RPE-204ENST00000411934 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
RPE-204ENST00000411934 ARHGEF10O15013 1369 aa11.56□□□□□ -0.56
RPE-204ENST00000411934 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
RPE-204ENST00000411934 PPIP5K1Q6PFW1 1433 aa11.56□□□□□ -0.56
RPE-204ENST00000411934 ALS2Q96Q42 1657 aa11.55□□□□□ -0.56
RPE-204ENST00000411934 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
RPE-204ENST00000411934 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
RPE-204ENST00000411934 FOXO3O43524 673 aa11.55□□□□□ -0.56
RPE-204ENST00000411934 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
RPE-204ENST00000411934 AKAP12Q02952 1782 aa11.54□□□□□ -0.56
RPE-204ENST00000411934 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
RPE-204ENST00000411934 TMF1P82094 1093 aa11.54□□□□□ -0.56
RPE-204ENST00000411934 SPATA31A3Q5VYP0 1347 aa11.54□□□□□ -0.56
RPE-204ENST00000411934 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
RPE-204ENST00000411934 NGDNQ8NEJ9 315 aaKnown RBP11.53□□□□□ -0.56
RPE-204ENST00000411934 NRKQ7Z2Y5 1582 aa11.53□□□□□ -0.56
RPE-204ENST00000411934 USP6P35125 1406 aa11.52□□□□□ -0.56
RPE-204ENST00000411934 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.56
RPE-204ENST00000411934 MON2Q7Z3U7 1717 aa11.52□□□□□ -0.56
RPE-204ENST00000411934 PMFBP1Q8TBY8 1022 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms