RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 NGEFQ8N5V2 710 aa21.87■■□□□ 1.09
GRAMD1A-202ENST00000411896 RAPGEF3O95398 923 aa21.86■■□□□ 1.09
GRAMD1A-202ENST00000411896 DEKP35659 375 aaKnown RBP21.86■■□□□ 1.09
GRAMD1A-202ENST00000411896 NUTM2DQ5VT03 806 aaPredicted RBP21.86■■□□□ 1.09
GRAMD1A-202ENST00000411896 GLI2P10070 1586 aa21.86■■□□□ 1.09
GRAMD1A-202ENST00000411896 PIK3C2BO00750 1634 aa21.85■■□□□ 1.09
GRAMD1A-202ENST00000411896 WWC1Q8IX03 1113 aa21.84■■□□□ 1.09
GRAMD1A-202ENST00000411896 USP32Q8NFA0 1604 aa21.84■■□□□ 1.09
GRAMD1A-202ENST00000411896 NEXMIFQ5QGS0 1516 aa21.84■■□□□ 1.09
GRAMD1A-202ENST00000411896 DIP2CQ9Y2E4 1556 aa21.83■■□□□ 1.08
GRAMD1A-202ENST00000411896 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.08
GRAMD1A-202ENST00000411896 NEO1Q92859 1461 aa21.82■■□□□ 1.08
GRAMD1A-202ENST00000411896 ARHGEF28Q8N1W1 1705 aaKnown RBP21.82■■□□□ 1.08
GRAMD1A-202ENST00000411896 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
GRAMD1A-202ENST00000411896 RRP7AQ9Y3A4 280 aaKnown RBP21.8■■□□□ 1.08
GRAMD1A-202ENST00000411896 RUNDC1Q96C34 613 aa21.8■■□□□ 1.08
GRAMD1A-202ENST00000411896 CGNL1Q0VF96 1302 aa21.79■■□□□ 1.08
GRAMD1A-202ENST00000411896 MTHFSP49914 203 aa21.78■■□□□ 1.08
GRAMD1A-202ENST00000411896 NEUROD2Q15784 382 aa21.78■■□□□ 1.08
GRAMD1A-202ENST00000411896 EVC2Q86UK5 1308 aa21.78■■□□□ 1.08
GRAMD1A-202ENST00000411896 VGFO15240 615 aaPredicted RBP21.78■■□□□ 1.08
GRAMD1A-202ENST00000411896 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
GRAMD1A-202ENST00000411896 C8orf34Q49A92 452 aa21.76■■□□□ 1.07
GRAMD1A-202ENST00000411896 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
GRAMD1A-202ENST00000411896 PUS7Q96PZ0 661 aaKnown RBP21.76■■□□□ 1.07
GRAMD1A-202ENST00000411896 LAS1LQ9Y4W2 734 aaKnown RBP21.76■■□□□ 1.07
GRAMD1A-202ENST00000411896 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
GRAMD1A-202ENST00000411896 IDI1Q13907 227 aa21.75■■□□□ 1.07
GRAMD1A-202ENST00000411896 FAM161AQ3B820 660 aa21.75■■□□□ 1.07
GRAMD1A-202ENST00000411896 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
GRAMD1A-202ENST00000411896 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
GRAMD1A-202ENST00000411896 PHF23Q9BUL5 403 aaPredicted RBP21.75■■□□□ 1.07
GRAMD1A-202ENST00000411896 RGS3P49796 1198 aa21.74■■□□□ 1.07
GRAMD1A-202ENST00000411896 PDE3AQ14432 1141 aa21.74■■□□□ 1.07
GRAMD1A-202ENST00000411896 IGHDP01880 384 aa21.73■■□□□ 1.07
GRAMD1A-202ENST00000411896 SAFB2Q14151 953 aaKnown RBP eCLIP21.73■■□□□ 1.07
GRAMD1A-202ENST00000411896 DDRGK1Q96HY6 314 aa21.73■■□□□ 1.07
GRAMD1A-202ENST00000411896 RICTORQ6R327 1708 aa21.73■■□□□ 1.07
GRAMD1A-202ENST00000411896 PANK1Q8TE04 598 aa21.73■■□□□ 1.07
GRAMD1A-202ENST00000411896 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
GRAMD1A-202ENST00000411896 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
GRAMD1A-202ENST00000411896 YEATS2Q9ULM3 1422 aa21.72■■□□□ 1.07
GRAMD1A-202ENST00000411896 NINLQ9Y2I6 1382 aa21.72■■□□□ 1.07
GRAMD1A-202ENST00000411896 NSD2O96028 1365 aa21.71■■□□□ 1.07
GRAMD1A-202ENST00000411896 CANXP27824 592 aaKnown RBP21.71■■□□□ 1.07
GRAMD1A-202ENST00000411896 COG6Q9Y2V7 657 aa21.71■■□□□ 1.07
GRAMD1A-202ENST00000411896 RARSP54136 660 aaKnown RBP21.7■■□□□ 1.06
GRAMD1A-202ENST00000411896 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
GRAMD1A-202ENST00000411896 STK26Q9P289 416 aa21.7■■□□□ 1.06
GRAMD1A-202ENST00000411896 ZFYVE9O95405 1425 aa21.7■■□□□ 1.06
GRAMD1A-202ENST00000411896 FRAT1Q92837 279 aaPredicted RBP21.68■■□□□ 1.06
GRAMD1A-202ENST00000411896 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
GRAMD1A-202ENST00000411896 CLUAP1Q96AJ1 413 aa21.68■■□□□ 1.06
GRAMD1A-202ENST00000411896 CCDC27Q2M243 656 aa21.67■■□□□ 1.06
GRAMD1A-202ENST00000411896 DNAJC5Q9H3Z4 198 aa21.67■■□□□ 1.06
GRAMD1A-202ENST00000411896 A0A1W2PP64 1363 aa21.67■■□□□ 1.06
GRAMD1A-202ENST00000411896 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
GRAMD1A-202ENST00000411896 U2AF1L5P0DN76 240 aaPredicted RBP21.66■■□□□ 1.06
GRAMD1A-202ENST00000411896 U2AF1Q01081 240 aaKnown RBP eCLIP21.66■■□□□ 1.06
GRAMD1A-202ENST00000411896 TNNQ9UQP3 1299 aa21.66■■□□□ 1.06
GRAMD1A-202ENST00000411896 TMEM131LA2VDJ0 1609 aa21.65■■□□□ 1.06
GRAMD1A-202ENST00000411896 PREX1Q8TCU6 1659 aa21.65■■□□□ 1.06
GRAMD1A-202ENST00000411896 ABCC11Q96J66 1382 aa21.65■■□□□ 1.06
GRAMD1A-202ENST00000411896 NEFMP07197 916 aa21.65■■□□□ 1.06
GRAMD1A-202ENST00000411896 PTPRMP28827 1452 aa21.65■■□□□ 1.06
GRAMD1A-202ENST00000411896 ADGRB2O60241 1585 aa21.64■■□□□ 1.05
GRAMD1A-202ENST00000411896 SLC4A3P48751 1232 aa21.64■■□□□ 1.05
GRAMD1A-202ENST00000411896 SRPK2P78362 688 aaKnown RBP21.64■■□□□ 1.05
GRAMD1A-202ENST00000411896 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
GRAMD1A-202ENST00000411896 RLBP1P12271 317 aa21.63■■□□□ 1.05
GRAMD1A-202ENST00000411896 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
GRAMD1A-202ENST00000411896 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
GRAMD1A-202ENST00000411896 MINK1Q8N4C8 1332 aaPredicted RBP21.61■■□□□ 1.05
GRAMD1A-202ENST00000411896 NCBP3Q53F19 620 aaKnown RBP21.6■■□□□ 1.05
GRAMD1A-202ENST00000411896 PRAM1Q96QH2 718 aa21.6■■□□□ 1.05
GRAMD1A-202ENST00000411896 COL3A1P02461 1466 aaPredicted RBP21.59■■□□□ 1.05
GRAMD1A-202ENST00000411896 MYH16Q9H6N6 1097 aa21.59■■□□□ 1.05
GRAMD1A-202ENST00000411896 YTHDC2Q9H6S0 1430 aaKnown RBP21.59■■□□□ 1.05
GRAMD1A-202ENST00000411896 CD163L1Q9NR16 1453 aa21.59■■□□□ 1.05
GRAMD1A-202ENST00000411896 FBXO31Q5XUX0 539 aaPredicted RBP21.59■■□□□ 1.05
GRAMD1A-202ENST00000411896 USP35Q9P2H5 1018 aa21.58■■□□□ 1.04
GRAMD1A-202ENST00000411896 ATAD2Q6PL18 1390 aa21.58■■□□□ 1.04
GRAMD1A-202ENST00000411896 CLTCQ00610 1675 aaKnown RBP21.57■■□□□ 1.04
GRAMD1A-202ENST00000411896 PCDHB15Q9Y5E8 787 aa21.57■■□□□ 1.04
GRAMD1A-202ENST00000411896 PLEKHF1Q96S99 279 aa21.57■■□□□ 1.04
GRAMD1A-202ENST00000411896 NLRP1Q9C000 1473 aa21.56■■□□□ 1.04
GRAMD1A-202ENST00000411896 VIRMAQ69YN4 1812 aaKnown RBP21.56■■□□□ 1.04
GRAMD1A-202ENST00000411896 U2SURPO15042 1029 aaKnown RBP21.56■■□□□ 1.04
GRAMD1A-202ENST00000411896 POGKQ9P215 609 aa21.56■■□□□ 1.04
GRAMD1A-202ENST00000411896 FYB1O15117 783 aa21.56■■□□□ 1.04
GRAMD1A-202ENST00000411896 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
GRAMD1A-202ENST00000411896 ANKRD26Q9UPS8 1709 aa21.55■■□□□ 1.04
GRAMD1A-202ENST00000411896 TSR2Q969E8 191 aaKnown RBP21.54■■□□□ 1.04
GRAMD1A-202ENST00000411896 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
GRAMD1A-202ENST00000411896 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
GRAMD1A-202ENST00000411896 PMFBP1Q8TBY8 1022 aa21.54■■□□□ 1.04
GRAMD1A-202ENST00000411896 AAMPQ13685 434 aa21.53■■□□□ 1.04
GRAMD1A-202ENST00000411896 DAXXQ9UER7 740 aaPredicted RBP21.53■■□□□ 1.04
GRAMD1A-202ENST00000411896 USP19O94966 1318 aa21.53■■□□□ 1.04
GRAMD1A-202ENST00000411896 MED14O60244 1454 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms