RNA–Protein interactions for RNA: ENST00000410833.1

RNU2-40P-201, Transcript of RNA, U2 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU2-40P, Length 196 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-40P-201ENST00000410833 PRDM9Q9NQV7 894 aa3.65□□□□□ -1.83
RNU2-40P-201ENST00000410833 DNMT3AQ9Y6K1 912 aaPredicted RBP3.65□□□□□ -1.83
RNU2-40P-201ENST00000410833 ADAM23O75077 832 aa3.64□□□□□ -1.83
RNU2-40P-201ENST00000410833 TRIM32Q13049 653 aa3.64□□□□□ -1.83
RNU2-40P-201ENST00000410833 RCCD1A6NED2 376 aa3.63□□□□□ -1.83
RNU2-40P-201ENST00000410833 CAPN5O15484 640 aaPredicted RBP3.63□□□□□ -1.83
RNU2-40P-201ENST00000410833 IRS1P35568 1242 aa3.63□□□□□ -1.83
RNU2-40P-201ENST00000410833 THAP11Q96EK4 314 aa3.63□□□□□ -1.83
RNU2-40P-201ENST00000410833 ZFP42Q96MM3 310 aa3.63□□□□□ -1.83
RNU2-40P-201ENST00000410833 SOBPA7XYQ1 873 aa3.62□□□□□ -1.83
RNU2-40P-201ENST00000410833 ALDH1A1P00352 501 aa3.62□□□□□ -1.83
RNU2-40P-201ENST00000410833 FOXK2Q01167 660 aa3.62□□□□□ -1.83
RNU2-40P-201ENST00000410833 RBM46Q8TBY0 533 aaKnown RBP3.62□□□□□ -1.83
RNU2-40P-201ENST00000410833 REPIN1Q9BWE0 567 aaKnown RBP3.62□□□□□ -1.83
RNU2-40P-201ENST00000410833 FAM161AQ3B820 660 aa3.61□□□□□ -1.83
RNU2-40P-201ENST00000410833 MORN1Q5T089 497 aa3.61□□□□□ -1.83
RNU2-40P-201ENST00000410833 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
RNU2-40P-201ENST00000410833 RC3H1Q5TC82 1133 aaKnown RBP3.61□□□□□ -1.83
RNU2-40P-201ENST00000410833 FMNL1O95466 1100 aaPredicted RBP3.6□□□□□ -1.83
RNU2-40P-201ENST00000410833 Q8N3U1 123 aa3.6□□□□□ -1.83
RNU2-40P-201ENST00000410833 ADGRG1Q9Y653 693 aa3.6□□□□□ -1.83
RNU2-40P-201ENST00000410833 FECHP22830 423 aa3.59□□□□□ -1.83
RNU2-40P-201ENST00000410833 SKOR1P84550 965 aa3.59□□□□□ -1.83
RNU2-40P-201ENST00000410833 KRT76Q01546 638 aa3.59□□□□□ -1.83
RNU2-40P-201ENST00000410833 SLC27A5Q9Y2P5 690 aa3.58□□□□□ -1.84
RNU2-40P-201ENST00000410833 MSTNO14793 375 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 FUT2Q10981 343 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 MSS51Q4VC12 460 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 ZNF385CQ66K41 422 aaPredicted RBP3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 KANK3Q6NY19 840 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 BRICD5Q6PL45 260 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 SVOPQ8N4V2 548 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 CNTNAP3BQ96NU0 1288 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 CNTNAP3Q9BZ76 1288 aa3.57□□□□□ -1.84
RNU2-40P-201ENST00000410833 PPFIA3O75145 1194 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 WNT7BP56706 349 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 RSPH4AQ5TD94 716 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 MRPL14Q6P1L8 145 aaKnown RBP3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 GPR161Q8N6U8 529 aaKnown RBP3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 PURBQ96QR8 312 aaKnown RBP3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 SPOCK3Q9BQ16 436 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 SALL2Q9Y467 1007 aaPredicted RBP3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 WASF2Q9Y6W5 498 aa3.56□□□□□ -1.84
RNU2-40P-201ENST00000410833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 SIAH2O43255 324 aa3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 ATP6V1AP38606 617 aa3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 MARSP56192 900 aaKnown RBP3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 SCARF1Q14162 830 aa3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 PLA2G4EQ3MJ16 856 aa3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 RNF19BQ6ZMZ0 732 aa3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 WHAMMQ8TF30 809 aa3.55□□□□□ -1.84
RNU2-40P-201ENST00000410833 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
RNU2-40P-201ENST00000410833 ARHGEF15O94989 841 aa3.54□□□□□ -1.84
RNU2-40P-201ENST00000410833 PTGDRQ13258 359 aa3.54□□□□□ -1.84
RNU2-40P-201ENST00000410833 CCDC24Q8N4L8 307 aa3.54□□□□□ -1.84
RNU2-40P-201ENST00000410833 ARIH1Q9Y4X5 557 aaPredicted RBP3.54□□□□□ -1.84
RNU2-40P-201ENST00000410833 BTBD11A6QL63 1104 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 K7ELQ4 463 aaPredicted RBP3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 MAN1A2O60476 641 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 ITGB2P05107 769 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 MMP16P51512 607 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 E2F4Q16254 413 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 RDH13Q8NBN7 331 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 EHBP1Q8NDI1 1231 aa3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 SCARF2Q96GP6 870 aaPredicted RBP3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 COL25A1Q9BXS0 654 aaPredicted RBP3.53□□□□□ -1.84
RNU2-40P-201ENST00000410833 PROCP04070 461 aa3.52□□□□□ -1.85
RNU2-40P-201ENST00000410833 GALNT6Q8NCL4 622 aa3.52□□□□□ -1.85
RNU2-40P-201ENST00000410833 DXOO77932 396 aaKnown RBP3.51□□□□□ -1.85
RNU2-40P-201ENST00000410833 RNFT1Q5M7Z0 435 aa3.51□□□□□ -1.85
RNU2-40P-201ENST00000410833 PXYLP1Q8TE99 480 aa3.51□□□□□ -1.85
RNU2-40P-201ENST00000410833 DCAF5Q96JK2 942 aa3.51□□□□□ -1.85
RNU2-40P-201ENST00000410833 SLURP2P0DP57 97 aa3.5□□□□□ -1.85
RNU2-40P-201ENST00000410833 TIMP2P16035 220 aa3.5□□□□□ -1.85
RNU2-40P-201ENST00000410833 DDX11L8A8MPP1 907 aa3.49□□□□□ -1.85
RNU2-40P-201ENST00000410833 WDR4P57081 412 aaKnown RBP3.49□□□□□ -1.85
RNU2-40P-201ENST00000410833 C6orf118Q5T5N4 469 aa3.49□□□□□ -1.85
RNU2-40P-201ENST00000410833 GCGRP47871 477 aa3.48□□□□□ -1.85
RNU2-40P-201ENST00000410833 NNTQ13423 1086 aa3.48□□□□□ -1.85
RNU2-40P-201ENST00000410833 USB1Q9BQ65 265 aaKnown RBP3.48□□□□□ -1.85
RNU2-40P-201ENST00000410833 TLL2Q9Y6L7 1015 aa3.48□□□□□ -1.85
RNU2-40P-201ENST00000410833 OATP04181 439 aa3.47□□□□□ -1.85
RNU2-40P-201ENST00000410833 FURINP09958 794 aa3.47□□□□□ -1.85
RNU2-40P-201ENST00000410833 Q3C1V9 767 aa3.47□□□□□ -1.85
RNU2-40P-201ENST00000410833 DNMT3LQ9UJW3 386 aa3.47□□□□□ -1.85
RNU2-40P-201ENST00000410833 CNTNAP5Q8WYK1 1306 aa3.46□□□□□ -1.85
RNU2-40P-201ENST00000410833 NUTM2FA1L443 756 aa3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 ADH1CP00326 375 aa3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 MLLT3P42568 568 aaPredicted RBP3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 BAG6P46379 1132 aa3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 SH3BP2P78314 561 aa3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 PTCRAQ6ISU1 281 aaPredicted RBP3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 LYPD4Q6UWN0 246 aa3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 METTL3Q86U44 580 aaKnown RBP3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 KLF16Q9BXK1 252 aaPredicted RBP3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 DAXXQ9UER7 740 aaPredicted RBP3.46□□□□□ -1.86
RNU2-40P-201ENST00000410833 BMP2P12643 396 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms