RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
LSM5-205ENST00000409952 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
LSM5-205ENST00000409952 HLA-CQ95604 372 aa8.59□□□□□ -1.03
LSM5-205ENST00000409952 SPSB2Q99619 263 aa8.59□□□□□ -1.03
LSM5-205ENST00000409952 KDM4CQ9H3R0 1056 aa8.59□□□□□ -1.03
LSM5-205ENST00000409952 FMNL1O95466 1100 aaPredicted RBP8.58□□□□□ -1.04
LSM5-205ENST00000409952 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
LSM5-205ENST00000409952 FAM160A2Q8N612 972 aaPredicted RBP8.58□□□□□ -1.04
LSM5-205ENST00000409952 DIXDC1Q155Q3 683 aa8.57□□□□□ -1.04
LSM5-205ENST00000409952 Q3C1V9 767 aa8.57□□□□□ -1.04
LSM5-205ENST00000409952 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
LSM5-205ENST00000409952 TBC1D2Q9BYX2 928 aa8.57□□□□□ -1.04
LSM5-205ENST00000409952 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
LSM5-205ENST00000409952 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
LSM5-205ENST00000409952 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 SPTLC1O15269 473 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 S1PR4O95977 384 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 GGCXP38435 758 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 GUCA2AQ02747 115 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 EMID1Q96A84 441 aaPredicted RBP8.55□□□□□ -1.04
LSM5-205ENST00000409952 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
LSM5-205ENST00000409952 FDX1P10109 184 aa8.54□□□□□ -1.04
LSM5-205ENST00000409952 NDUFV2P19404 249 aa8.54□□□□□ -1.04
LSM5-205ENST00000409952 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
LSM5-205ENST00000409952 RSBN1LQ6PCB5 846 aaPredicted RBP8.54□□□□□ -1.04
LSM5-205ENST00000409952 ANKLE1Q8NAG6 615 aa8.54□□□□□ -1.04
LSM5-205ENST00000409952 MMP16P51512 607 aa8.53□□□□□ -1.04
LSM5-205ENST00000409952 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.05
LSM5-205ENST00000409952 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
LSM5-205ENST00000409952 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
LSM5-205ENST00000409952 ZBTB7CA1YPR0 619 aa8.51□□□□□ -1.05
LSM5-205ENST00000409952 FAM117AQ9C073 453 aa8.51□□□□□ -1.05
LSM5-205ENST00000409952 CCDC9Q9Y3X0 531 aaKnown RBP8.51□□□□□ -1.05
LSM5-205ENST00000409952 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
LSM5-205ENST00000409952 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
LSM5-205ENST00000409952 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
LSM5-205ENST00000409952 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
LSM5-205ENST00000409952 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
LSM5-205ENST00000409952 DDRGK1Q96HY6 314 aa8.5□□□□□ -1.05
LSM5-205ENST00000409952 PRKD2Q9BZL6 878 aa8.5□□□□□ -1.05
LSM5-205ENST00000409952 PRDM9Q9NQV7 894 aa8.5□□□□□ -1.05
LSM5-205ENST00000409952 APBB1O00213 710 aa8.49□□□□□ -1.05
LSM5-205ENST00000409952 LCE2BO14633 110 aa8.49□□□□□ -1.05
LSM5-205ENST00000409952 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
LSM5-205ENST00000409952 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
LSM5-205ENST00000409952 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
LSM5-205ENST00000409952 ARID3CA6NKF2 412 aa8.48□□□□□ -1.05
LSM5-205ENST00000409952 FLIIQ13045 1269 aa8.48□□□□□ -1.05
LSM5-205ENST00000409952 PLA2G2CQ5R387 149 aa8.48□□□□□ -1.05
LSM5-205ENST00000409952 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
LSM5-205ENST00000409952 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
LSM5-205ENST00000409952 SH3D19Q5HYK7 790 aa8.47□□□□□ -1.05
LSM5-205ENST00000409952 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
LSM5-205ENST00000409952 MTMR2Q13614 643 aa8.46□□□□□ -1.06
LSM5-205ENST00000409952 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
LSM5-205ENST00000409952 LILRB3O75022 631 aa8.45□□□□□ -1.06
LSM5-205ENST00000409952 JUNDP17535 347 aa8.45□□□□□ -1.06
LSM5-205ENST00000409952 LIAT1Q6ZQX7 453 aa8.45□□□□□ -1.06
LSM5-205ENST00000409952 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
LSM5-205ENST00000409952 CLK2P49760 499 aaKnown RBP8.44□□□□□ -1.06
LSM5-205ENST00000409952 LAPTM4AQ15012 233 aa8.44□□□□□ -1.06
LSM5-205ENST00000409952 SKIV2LQ15477 1246 aaKnown RBP8.44□□□□□ -1.06
LSM5-205ENST00000409952 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
LSM5-205ENST00000409952 FCF1Q9Y324 198 aaKnown RBP8.44□□□□□ -1.06
LSM5-205ENST00000409952 SLC19A1P41440 591 aa8.43□□□□□ -1.06
LSM5-205ENST00000409952 RPIAP49247 311 aa8.43□□□□□ -1.06
LSM5-205ENST00000409952 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.43□□□□□ -1.06
LSM5-205ENST00000409952 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
LSM5-205ENST00000409952 QPCTQ16769 361 aa8.42□□□□□ -1.06
LSM5-205ENST00000409952 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
LSM5-205ENST00000409952 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
LSM5-205ENST00000409952 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
LSM5-205ENST00000409952 CFAP99D6REC4 459 aa8.41□□□□□ -1.06
LSM5-205ENST00000409952 CABLES1Q8TDN4 633 aa8.41□□□□□ -1.06
LSM5-205ENST00000409952 GFRA3O60609 400 aa8.4□□□□□ -1.06
LSM5-205ENST00000409952 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.06
LSM5-205ENST00000409952 PTPRNQ16849 979 aa8.39□□□□□ -1.07
LSM5-205ENST00000409952 FBXO31Q5XUX0 539 aaPredicted RBP8.39□□□□□ -1.07
LSM5-205ENST00000409952 PPP2R2DQ66LE6 453 aa8.39□□□□□ -1.07
LSM5-205ENST00000409952 LYPD8Q6UX82 237 aa8.39□□□□□ -1.07
LSM5-205ENST00000409952 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
LSM5-205ENST00000409952 POLR3EQ9NVU0 708 aa8.39□□□□□ -1.07
LSM5-205ENST00000409952 A6NJR5 290 aa8.38□□□□□ -1.07
LSM5-205ENST00000409952 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
LSM5-205ENST00000409952 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
LSM5-205ENST00000409952 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
LSM5-205ENST00000409952 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
LSM5-205ENST00000409952 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
LSM5-205ENST00000409952 CCNYL3P0C7X3 344 aa8.36□□□□□ -1.07
LSM5-205ENST00000409952 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
LSM5-205ENST00000409952 TRAK2O60296 914 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 GDF9O60383 454 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 F12P00748 615 aaPredicted RBP8.35□□□□□ -1.07
LSM5-205ENST00000409952 PRR20EP86478 221 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 PRR20CP86479 221 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 PRR20DP86480 221 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 PRR20BP86481 221 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 PRR20AP86496 221 aa8.35□□□□□ -1.07
LSM5-205ENST00000409952 PTCRAQ6ISU1 281 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms