RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
CCDC85A-201ENST00000407595 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
CCDC85A-201ENST00000407595 RNF123Q5XPI4 1314 aa19.72■□□□□ 0.75
CCDC85A-201ENST00000407595 IPO8O15397 1037 aaKnown RBP19.7■□□□□ 0.74
CCDC85A-201ENST00000407595 MBD5Q9P267 1494 aa19.7■□□□□ 0.74
CCDC85A-201ENST00000407595 ABCC10Q5T3U5 1492 aa19.69■□□□□ 0.74
CCDC85A-201ENST00000407595 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
CCDC85A-201ENST00000407595 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
CCDC85A-201ENST00000407595 A2MP01023 1474 aa19.69■□□□□ 0.74
CCDC85A-201ENST00000407595 TEX14Q8IWB6 1497 aa19.69■□□□□ 0.74
CCDC85A-201ENST00000407595 PSME1Q06323 249 aa19.68■□□□□ 0.74
CCDC85A-201ENST00000407595 EXOSC9Q06265 439 aaKnown RBP19.68■□□□□ 0.74
CCDC85A-201ENST00000407595 NME9Q86XW9 330 aa19.67■□□□□ 0.74
CCDC85A-201ENST00000407595 NCKAP5LQ9HCH0 1330 aa19.67■□□□□ 0.74
CCDC85A-201ENST00000407595 DUOX2Q9NRD8 1548 aa19.67■□□□□ 0.74
CCDC85A-201ENST00000407595 VSIG10Q8N0Z9 540 aa19.66■□□□□ 0.74
CCDC85A-201ENST00000407595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.66■□□□□ 0.74
CCDC85A-201ENST00000407595 AMER1Q5JTC6 1135 aaPredicted RBP19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 ZKSCAN2Q63HK3 967 aa19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 CARD14Q9BXL6 1004 aa19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 NUDT16Q96DE0 195 aaKnown RBP19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 ARID3AQ99856 593 aa19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 RPGRIP1LQ68CZ1 1315 aa19.65■□□□□ 0.74
CCDC85A-201ENST00000407595 ABCA8O94911 1581 aa19.64■□□□□ 0.73
CCDC85A-201ENST00000407595 HSP90AA2PQ14568 343 aaPredicted RBP19.64■□□□□ 0.73
CCDC85A-201ENST00000407595 EMILIN1Q9Y6C2 1016 aa19.64■□□□□ 0.73
CCDC85A-201ENST00000407595 RALGAPBQ86X10 1494 aa19.64■□□□□ 0.73
CCDC85A-201ENST00000407595 PER1O15534 1290 aaPredicted RBP19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 DUSP27Q5VZP5 1158 aa19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 SULT6B1Q6IMI4 303 aa19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 ABTB2Q8N961 1025 aa19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 RTEL1-TNFRSF6BF6WH68 1400 aa19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 EIF2S2P20042 333 aaKnown RBP19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 ESCO1Q5FWF5 840 aa19.63■□□□□ 0.73
CCDC85A-201ENST00000407595 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
CCDC85A-201ENST00000407595 FAM43AQ8N2R8 423 aa19.62■□□□□ 0.73
CCDC85A-201ENST00000407595 SCAF11Q99590 1463 aaKnown RBP19.62■□□□□ 0.73
CCDC85A-201ENST00000407595 ZRANB1Q9UGI0 708 aa19.61■□□□□ 0.73
CCDC85A-201ENST00000407595 ADGRL2O95490 1459 aa19.61■□□□□ 0.73
CCDC85A-201ENST00000407595 CALD1Q05682 793 aaKnown RBP19.61■□□□□ 0.73
CCDC85A-201ENST00000407595 SLFN5Q08AF3 891 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 PDZRN3Q9UPQ7 1066 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 GBP4Q96PP9 640 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 STK31Q9BXU1 1019 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 CCDC61Q9Y6R9 512 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 CHD1O14646 1710 aa19.6■□□□□ 0.73
CCDC85A-201ENST00000407595 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
CCDC85A-201ENST00000407595 ZNF518AQ6AHZ1 1483 aa19.59■□□□□ 0.73
CCDC85A-201ENST00000407595 SHANK2Q9UPX8 1470 aa19.59■□□□□ 0.73
CCDC85A-201ENST00000407595 C8orf34Q49A92 452 aa19.59■□□□□ 0.73
CCDC85A-201ENST00000407595 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
CCDC85A-201ENST00000407595 TAOK2Q9UL54 1235 aa19.59■□□□□ 0.73
CCDC85A-201ENST00000407595 IGHDP01880 384 aa19.58■□□□□ 0.72
CCDC85A-201ENST00000407595 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.72
CCDC85A-201ENST00000407595 C1orf115Q9H7X2 142 aa19.58■□□□□ 0.72
CCDC85A-201ENST00000407595 MSNP26038 577 aaKnown RBP19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 CHMP5Q9NZZ3 219 aa19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 PTMAP06454 111 aaKnown RBP19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 TTC37Q6PGP7 1564 aa19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 SPATA31E1Q6ZUB1 1445 aa19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 ANKRD45Q5TZF3 282 aa19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
CCDC85A-201ENST00000407595 ARHGEF12Q9NZN5 1544 aa19.56■□□□□ 0.72
CCDC85A-201ENST00000407595 TRAK2O60296 914 aa19.56■□□□□ 0.72
CCDC85A-201ENST00000407595 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
CCDC85A-201ENST00000407595 DNTTIP2Q5QJE6 756 aaKnown RBP19.55■□□□□ 0.72
CCDC85A-201ENST00000407595 LNPKQ9C0E8 428 aa19.55■□□□□ 0.72
CCDC85A-201ENST00000407595 SAMD9LQ8IVG5 1584 aa19.54■□□□□ 0.72
CCDC85A-201ENST00000407595 LMOD3Q0VAK6 560 aa19.54■□□□□ 0.72
CCDC85A-201ENST00000407595 LRPPRCP42704 1394 aaKnown RBP19.54■□□□□ 0.72
CCDC85A-201ENST00000407595 PROSER2Q86WR7 435 aaPredicted RBP19.53■□□□□ 0.72
CCDC85A-201ENST00000407595 PDE3AQ14432 1141 aa19.53■□□□□ 0.72
CCDC85A-201ENST00000407595 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
CCDC85A-201ENST00000407595 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
CCDC85A-201ENST00000407595 DDX11L8A8MPP1 907 aa19.51■□□□□ 0.71
CCDC85A-201ENST00000407595 SEC24BO95487 1268 aa19.51■□□□□ 0.71
CCDC85A-201ENST00000407595 TEFQ10587 303 aa19.51■□□□□ 0.71
CCDC85A-201ENST00000407595 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
CCDC85A-201ENST00000407595 FYB1O15117 783 aa19.5■□□□□ 0.71
CCDC85A-201ENST00000407595 YEATS2Q9ULM3 1422 aa19.5■□□□□ 0.71
CCDC85A-201ENST00000407595 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 SPINK5Q9NQ38 1064 aaPredicted RBP19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 LRRIQ1Q96JM4 1722 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 PARD3Q8TEW0 1356 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 FOXO3O43524 673 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 PLCB2Q00722 1185 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 CCDC9Q9Y3X0 531 aaKnown RBP19.49■□□□□ 0.71
CCDC85A-201ENST00000407595 ATP7AQ04656 1500 aa19.48■□□□□ 0.71
CCDC85A-201ENST00000407595 MCM4P33991 863 aa19.48■□□□□ 0.71
CCDC85A-201ENST00000407595 DDX49Q9Y6V7 483 aaKnown RBP19.48■□□□□ 0.71
CCDC85A-201ENST00000407595 MCM10Q7L590 875 aa19.48■□□□□ 0.71
CCDC85A-201ENST00000407595 CHMP4BQ9H444 224 aaKnown RBP19.48■□□□□ 0.71
CCDC85A-201ENST00000407595 NLRP2Q9NX02 1062 aa19.48■□□□□ 0.71
CCDC85A-201ENST00000407595 GCC2Q8IWJ2 1684 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms