RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ANP32AP39687 249 aaKnown RBP12.96□□□□□ -0.34
MSH2-202ENST00000406134 PTPRMP28827 1452 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 CD163L1Q9NR16 1453 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 BCAR3O75815 825 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
MSH2-202ENST00000406134 TMEM132EQ6IEE7 984 aa12.94□□□□□ -0.34
MSH2-202ENST00000406134 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
MSH2-202ENST00000406134 NBR1Q14596 966 aa12.93□□□□□ -0.34
MSH2-202ENST00000406134 RIMBP3CA6NJZ7 1639 aa12.93□□□□□ -0.34
MSH2-202ENST00000406134 RIMBP3BA6NNM3 1639 aa12.93□□□□□ -0.34
MSH2-202ENST00000406134 RIMBP3Q9UFD9 1639 aa12.93□□□□□ -0.34
MSH2-202ENST00000406134 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
MSH2-202ENST00000406134 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
MSH2-202ENST00000406134 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
MSH2-202ENST00000406134 YEATS2Q9ULM3 1422 aa12.92□□□□□ -0.34
MSH2-202ENST00000406134 CENPQQ7L2Z9 268 aaPredicted RBP12.92□□□□□ -0.34
MSH2-202ENST00000406134 ZFYVE9O95405 1425 aa12.91□□□□□ -0.34
MSH2-202ENST00000406134 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
MSH2-202ENST00000406134 RPGRIP1LQ68CZ1 1315 aa12.9□□□□□ -0.34
MSH2-202ENST00000406134 E9PSI1 815 aa12.9□□□□□ -0.34
MSH2-202ENST00000406134 ANKRD36BQ8N2N9 1353 aa12.9□□□□□ -0.35
MSH2-202ENST00000406134 IGHDP01880 384 aa12.89□□□□□ -0.35
MSH2-202ENST00000406134 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
MSH2-202ENST00000406134 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
MSH2-202ENST00000406134 SLC24A1O60721 1099 aa12.88□□□□□ -0.35
MSH2-202ENST00000406134 GGT6Q6P531 493 aa12.88□□□□□ -0.35
MSH2-202ENST00000406134 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
MSH2-202ENST00000406134 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
MSH2-202ENST00000406134 ALKQ9UM73 1620 aa12.87□□□□□ -0.35
MSH2-202ENST00000406134 USP19O94966 1318 aa12.87□□□□□ -0.35
MSH2-202ENST00000406134 CDC42BPGQ6DT37 1551 aa12.87□□□□□ -0.35
MSH2-202ENST00000406134 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
MSH2-202ENST00000406134 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
MSH2-202ENST00000406134 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
MSH2-202ENST00000406134 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
MSH2-202ENST00000406134 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
MSH2-202ENST00000406134 MED14O60244 1454 aa12.85□□□□□ -0.35
MSH2-202ENST00000406134 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 RLBP1P12271 317 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 NSD2O96028 1365 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
MSH2-202ENST00000406134 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
MSH2-202ENST00000406134 MTHFSP49914 203 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 IDI1Q13907 227 aa12.84□□□□□ -0.35
MSH2-202ENST00000406134 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
MSH2-202ENST00000406134 NINLQ9Y2I6 1382 aa12.83□□□□□ -0.35
MSH2-202ENST00000406134 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
MSH2-202ENST00000406134 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
MSH2-202ENST00000406134 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 DLG5Q8TDM6 1919 aa12.83□□□□□ -0.36
MSH2-202ENST00000406134 PDE3AQ14432 1141 aa12.82□□□□□ -0.36
MSH2-202ENST00000406134 FAM161AQ3B820 660 aa12.82□□□□□ -0.36
MSH2-202ENST00000406134 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
MSH2-202ENST00000406134 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
MSH2-202ENST00000406134 LAS1LQ9Y4W2 734 aaKnown RBP12.81□□□□□ -0.36
MSH2-202ENST00000406134 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
MSH2-202ENST00000406134 TSPOAP1O95153 1857 aa12.81□□□□□ -0.36
MSH2-202ENST00000406134 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
MSH2-202ENST00000406134 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
MSH2-202ENST00000406134 YTHDC2Q9H6S0 1430 aaKnown RBP12.8□□□□□ -0.36
MSH2-202ENST00000406134 SPATA31D1Q6ZQQ2 1576 aa12.8□□□□□ -0.36
MSH2-202ENST00000406134 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
MSH2-202ENST00000406134 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
MSH2-202ENST00000406134 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 SEC24BO95487 1268 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 COG6Q9Y2V7 657 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
MSH2-202ENST00000406134 DLC1Q96QB1 1528 aa12.78□□□□□ -0.36
MSH2-202ENST00000406134 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
MSH2-202ENST00000406134 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.36
MSH2-202ENST00000406134 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.36
MSH2-202ENST00000406134 RGS3P49796 1198 aa12.76□□□□□ -0.37
MSH2-202ENST00000406134 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
MSH2-202ENST00000406134 C3P01024 1663 aa12.76□□□□□ -0.37
MSH2-202ENST00000406134 AGLP35573 1532 aa12.76□□□□□ -0.37
MSH2-202ENST00000406134 A2ML1A8K2U0 1454 aa12.75□□□□□ -0.37
MSH2-202ENST00000406134 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
MSH2-202ENST00000406134 FYB1O15117 783 aa12.75□□□□□ -0.37
MSH2-202ENST00000406134 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
MSH2-202ENST00000406134 NRKQ7Z2Y5 1582 aa12.74□□□□□ -0.37
MSH2-202ENST00000406134 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
MSH2-202ENST00000406134 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
MSH2-202ENST00000406134 BCL2L13Q9BXK5 485 aa12.74□□□□□ -0.37
MSH2-202ENST00000406134 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms