RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 LMOD3Q0VAK6 560 aa9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 TMEM132AQ24JP5 1023 aa9.48□□□□□ -0.89
RBFOX2-205ENST00000405409 EZRP15311 586 aaKnown RBP9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 GPATCH11Q8N954 259 aa9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 RRP7AQ9Y3A4 280 aaKnown RBP9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 MRE11P49959 708 aa9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 NUCB2P80303 420 aa9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 TSPY26PQ9H489 355 aa9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 CCDC181Q5TID7 509 aa9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 BCL2L13Q9BXK5 485 aa9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 LETM1O95202 739 aaPredicted RBP9.47□□□□□ -0.89
RBFOX2-205ENST00000405409 UQCRHLA0A096LP55 91 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 UQCRHP07919 91 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 CCDC27Q2M243 656 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 RNF20Q5VTR2 975 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 NGEFQ8N5V2 710 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 RBM33Q96EV2 1170 aaKnown RBP9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 GOLGA6L10A0A0M3HER8 536 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 FILIP1LQ4L180 1135 aa9.46□□□□□ -0.89
RBFOX2-205ENST00000405409 IFIT2P09913 472 aaKnown RBP9.46□□□□□ -0.9
RBFOX2-205ENST00000405409 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
RBFOX2-205ENST00000405409 EIF3AQ14152 1382 aaKnown RBP9.46□□□□□ -0.9
RBFOX2-205ENST00000405409 EIF3JO75822 258 aaKnown RBP9.46□□□□□ -0.9
RBFOX2-205ENST00000405409 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.9
RBFOX2-205ENST00000405409 VPS37DQ86XT2 251 aa9.46□□□□□ -0.9
RBFOX2-205ENST00000405409 RABEP1Q15276 862 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 CEP63Q96MT8 703 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 EXOC6Q8TAG9 804 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 EEA1Q15075 1411 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 CCDC97Q96F63 343 aaPredicted RBP9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 FYB1O15117 783 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 RSPH4AQ5TD94 716 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
RBFOX2-205ENST00000405409 AMPHP49418 695 aa9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 CAVIN1Q6NZI2 390 aaKnown RBP9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 LRRCC1Q9C099 1032 aa9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 SDF4Q9BRK5 362 aa9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 FAM177A1Q8N128 213 aaPredicted RBP9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 FANCIQ9NVI1 1328 aa9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 ELL2O00472 640 aaPredicted RBP9.44□□□□□ -0.9
RBFOX2-205ENST00000405409 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 INTS3Q68E01 1043 aaKnown RBP9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 HMGN5P82970 282 aaKnown RBP9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 CCDC102AQ96A19 550 aa9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 FMNL2Q96PY5 1086 aa9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 BRPF3Q9ULD4 1205 aa9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 MSH5O43196 834 aa9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 SLC26A8Q96RN1 970 aa9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 RRP1P56182 461 aaKnown RBP9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 SEPT11Q9NVA2 429 aaKnown RBP9.43□□□□□ -0.9
RBFOX2-205ENST00000405409 PDE3BQ13370 1112 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 C9orf78Q9NZ63 289 aaPredicted RBP9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 ERLIN1O75477 346 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 MAP2K1Q02750 393 aaPredicted RBP9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 CDK5RAP3Q96JB5 506 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 PRDM10Q9NQV6 1147 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 ZKSCAN2Q63HK3 967 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 ZNHIT6Q9NWK9 470 aaKnown RBP9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 COG6Q9Y2V7 657 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 CCDC112Q8NEF3 446 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
RBFOX2-205ENST00000405409 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 CCNB3Q8WWL7 1395 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 TRAK2O60296 914 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 SERPINC1P01008 464 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 CCDC91Q7Z6B0 441 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 XBP1P17861 261 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 C1orf141Q5JVX7 400 aa9.41□□□□□ -0.9
RBFOX2-205ENST00000405409 EIF2S2P20042 333 aaKnown RBP9.4□□□□□ -0.9
RBFOX2-205ENST00000405409 TNNT1P13805 278 aa9.4□□□□□ -0.9
RBFOX2-205ENST00000405409 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
RBFOX2-205ENST00000405409 PHLDB1Q86UU1 1377 aa9.4□□□□□ -0.9
RBFOX2-205ENST00000405409 KINO60870 393 aaKnown RBP9.4□□□□□ -0.91
RBFOX2-205ENST00000405409 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.91
RBFOX2-205ENST00000405409 LRRFIP2Q9Y608 721 aaKnown RBP9.4□□□□□ -0.91
RBFOX2-205ENST00000405409 KRT18P05783 430 aaKnown RBP9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 RALYLQ86SE5 291 aaKnown RBP9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 IPO4Q8TEX9 1081 aaKnown RBP9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 ZNF526Q8TF50 670 aaPredicted RBP9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 SHTN1A0MZ66 631 aa9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 CEBPZQ03701 1054 aaKnown RBP9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 IKQ13123 557 aaPredicted RBP9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 PDCL3Q9H2J4 239 aa9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 MPNDQ8N594 471 aa9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 BICRAQ9NZM4 1560 aa9.39□□□□□ -0.91
RBFOX2-205ENST00000405409 PRPF40AO75400 957 aaKnown RBP9.38□□□□□ -0.91
RBFOX2-205ENST00000405409 STAMBPO95630 424 aa9.38□□□□□ -0.91
RBFOX2-205ENST00000405409 IQCEQ6IPM2 695 aa9.38□□□□□ -0.91
RBFOX2-205ENST00000405409 G3BP1Q13283 466 aaKnown RBP eCLIP9.38□□□□□ -0.91
RBFOX2-205ENST00000405409 NGDNQ8NEJ9 315 aaKnown RBP9.38□□□□□ -0.91
RBFOX2-205ENST00000405409 DNAJC2Q99543 621 aaKnown RBP9.38□□□□□ -0.91
RBFOX2-205ENST00000405409 SETD5Q9C0A6 1442 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms