RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FLIIQ13045 1269 aa10.06□□□□□ -0.8
HMGB3P19-201ENST00000403971 MCM6Q14566 821 aa10.06□□□□□ -0.8
HMGB3P19-201ENST00000403971 PRR14Q9BWN1 585 aa10.06□□□□□ -0.8
HMGB3P19-201ENST00000403971 MTMR2Q13614 643 aa10.05□□□□□ -0.8
HMGB3P19-201ENST00000403971 SNRKQ9NRH2 765 aa10.05□□□□□ -0.8
HMGB3P19-201ENST00000403971 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
HMGB3P19-201ENST00000403971 AP1G2O75843 785 aa10.04□□□□□ -0.8
HMGB3P19-201ENST00000403971 PTPN5P54829 565 aa10.04□□□□□ -0.8
HMGB3P19-201ENST00000403971 BLOC1S3Q6QNY0 202 aa10.04□□□□□ -0.8
HMGB3P19-201ENST00000403971 CFAP99D6REC4 459 aa10.03□□□□□ -0.8
HMGB3P19-201ENST00000403971 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
HMGB3P19-201ENST00000403971 RNF19BQ6ZMZ0 732 aa10.03□□□□□ -0.8
HMGB3P19-201ENST00000403971 TSC1Q92574 1164 aa10.02□□□□□ -0.81
HMGB3P19-201ENST00000403971 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.81
HMGB3P19-201ENST00000403971 COPS2P61201 443 aa10.01□□□□□ -0.81
HMGB3P19-201ENST00000403971 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
HMGB3P19-201ENST00000403971 BANK1Q8NDB2 785 aa10.01□□□□□ -0.81
HMGB3P19-201ENST00000403971 PRR7Q8TB68 274 aa10□□□□□ -0.81
HMGB3P19-201ENST00000403971 CLUAP1Q96AJ1 413 aa10□□□□□ -0.81
HMGB3P19-201ENST00000403971 ZMYND15Q9H091 742 aa10□□□□□ -0.81
HMGB3P19-201ENST00000403971 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
HMGB3P19-201ENST00000403971 USP17L8P0C7I0 530 aa9.99□□□□□ -0.81
HMGB3P19-201ENST00000403971 CTDSPL2Q05D32 466 aa9.99□□□□□ -0.81
HMGB3P19-201ENST00000403971 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
HMGB3P19-201ENST00000403971 Q3C1V9 767 aa9.98□□□□□ -0.81
HMGB3P19-201ENST00000403971 RETREG3Q86VR2 466 aa9.98□□□□□ -0.81
HMGB3P19-201ENST00000403971 MTMR14Q8NCE2 650 aa9.98□□□□□ -0.81
HMGB3P19-201ENST00000403971 POM121Q96HA1 1249 aa9.98□□□□□ -0.81
HMGB3P19-201ENST00000403971 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
HMGB3P19-201ENST00000403971 NR1I2O75469 434 aa9.97□□□□□ -0.81
HMGB3P19-201ENST00000403971 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
HMGB3P19-201ENST00000403971 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
HMGB3P19-201ENST00000403971 FMNL1O95466 1100 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P19-201ENST00000403971 HELBQ8NG08 1087 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P19-201ENST00000403971 LRRN4Q8WUT4 740 aa9.95□□□□□ -0.82
HMGB3P19-201ENST00000403971 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
HMGB3P19-201ENST00000403971 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P19-201ENST00000403971 PER1O15534 1290 aaPredicted RBP9.94□□□□□ -0.82
HMGB3P19-201ENST00000403971 TLL1O43897 1013 aa9.94□□□□□ -0.82
HMGB3P19-201ENST00000403971 NYAP1Q6ZVC0 841 aa9.94□□□□□ -0.82
HMGB3P19-201ENST00000403971 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
HMGB3P19-201ENST00000403971 MTRQ99707 1265 aa9.94□□□□□ -0.82
HMGB3P19-201ENST00000403971 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
HMGB3P19-201ENST00000403971 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
HMGB3P19-201ENST00000403971 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
HMGB3P19-201ENST00000403971 TJAP1Q5JTD0 557 aa9.91□□□□□ -0.82
HMGB3P19-201ENST00000403971 FAM160A2Q8N612 972 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P19-201ENST00000403971 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P19-201ENST00000403971 GJD4Q96KN9 370 aaPredicted RBP9.91□□□□□ -0.82
HMGB3P19-201ENST00000403971 SPSB2Q99619 263 aa9.91□□□□□ -0.82
HMGB3P19-201ENST00000403971 PCDH10Q9P2E7 1040 aa9.91□□□□□ -0.82
HMGB3P19-201ENST00000403971 ZPR1O75312 459 aa9.9□□□□□ -0.82
HMGB3P19-201ENST00000403971 EPS8L1Q8TE68 723 aa9.9□□□□□ -0.82
HMGB3P19-201ENST00000403971 GDPD2Q9HCC8 539 aa9.9□□□□□ -0.82
HMGB3P19-201ENST00000403971 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
HMGB3P19-201ENST00000403971 A6NJR5 290 aa9.89□□□□□ -0.83
HMGB3P19-201ENST00000403971 TRIM34Q9BYJ4 488 aa9.89□□□□□ -0.83
HMGB3P19-201ENST00000403971 TBC1D2BQ9UPU7 963 aa9.89□□□□□ -0.83
HMGB3P19-201ENST00000403971 RAD21O60216 631 aa9.88□□□□□ -0.83
HMGB3P19-201ENST00000403971 DESI1Q6ICB0 168 aa9.88□□□□□ -0.83
HMGB3P19-201ENST00000403971 IL21Q9HBE4 155 aa9.88□□□□□ -0.83
HMGB3P19-201ENST00000403971 JUNDP17535 347 aa9.87□□□□□ -0.83
HMGB3P19-201ENST00000403971 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
HMGB3P19-201ENST00000403971 NKX2-3Q8TAU0 364 aa9.87□□□□□ -0.83
HMGB3P19-201ENST00000403971 SOCS7O14512 581 aa9.86□□□□□ -0.83
HMGB3P19-201ENST00000403971 ADH1BP00325 375 aa9.86□□□□□ -0.83
HMGB3P19-201ENST00000403971 ABL2P42684 1182 aa9.86□□□□□ -0.83
HMGB3P19-201ENST00000403971 NR6A1Q15406 480 aa9.86□□□□□ -0.83
HMGB3P19-201ENST00000403971 MSS51Q4VC12 460 aa9.86□□□□□ -0.83
HMGB3P19-201ENST00000403971 PROSER2Q86WR7 435 aaPredicted RBP9.86□□□□□ -0.83
HMGB3P19-201ENST00000403971 ARID3CA6NKF2 412 aa9.85□□□□□ -0.83
HMGB3P19-201ENST00000403971 TRAK2O60296 914 aa9.85□□□□□ -0.83
HMGB3P19-201ENST00000403971 FNBP4Q8N3X1 1017 aaPredicted RBP9.85□□□□□ -0.83
HMGB3P19-201ENST00000403971 HCSTQ9UBK5 93 aa9.85□□□□□ -0.83
HMGB3P19-201ENST00000403971 APBB1O00213 710 aa9.83□□□□□ -0.84
HMGB3P19-201ENST00000403971 GPR37L1O60883 481 aa9.83□□□□□ -0.84
HMGB3P19-201ENST00000403971 DXOO77932 396 aaKnown RBP9.83□□□□□ -0.84
HMGB3P19-201ENST00000403971 NDUFB9Q9Y6M9 179 aa9.83□□□□□ -0.84
HMGB3P19-201ENST00000403971 MMP16P51512 607 aa9.82□□□□□ -0.84
HMGB3P19-201ENST00000403971 C1orf115Q9H7X2 142 aa9.82□□□□□ -0.84
HMGB3P19-201ENST00000403971 MAP10Q9P2G4 905 aa9.82□□□□□ -0.84
HMGB3P19-201ENST00000403971 F12P00748 615 aaPredicted RBP9.81□□□□□ -0.84
HMGB3P19-201ENST00000403971 PTPRNQ16849 979 aa9.81□□□□□ -0.84
HMGB3P19-201ENST00000403971 SLC6A16Q9GZN6 736 aa9.81□□□□□ -0.84
HMGB3P19-201ENST00000403971 S1PR4O95977 384 aa9.8□□□□□ -0.84
HMGB3P19-201ENST00000403971 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
HMGB3P19-201ENST00000403971 IRF5Q13568 498 aa9.8□□□□□ -0.84
HMGB3P19-201ENST00000403971 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
HMGB3P19-201ENST00000403971 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
HMGB3P19-201ENST00000403971 ZNF777Q9ULD5 760 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P19-201ENST00000403971 CTHP32929 405 aa9.79□□□□□ -0.84
HMGB3P19-201ENST00000403971 CCNYL3P0C7X3 344 aa9.78□□□□□ -0.84
HMGB3P19-201ENST00000403971 ZNF330Q9Y3S2 320 aaPredicted RBP9.78□□□□□ -0.84
HMGB3P19-201ENST00000403971 KCNC4Q03721 635 aa9.77□□□□□ -0.85
HMGB3P19-201ENST00000403971 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
HMGB3P19-201ENST00000403971 POM121CA8CG34 1229 aa9.76□□□□□ -0.85
HMGB3P19-201ENST00000403971 ITGBL1O95965 494 aaPredicted RBP9.76□□□□□ -0.85
HMGB3P19-201ENST00000403971 EVA1BQ9NVM1 165 aa9.76□□□□□ -0.85
HMGB3P19-201ENST00000403971 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
HMGB3P19-201ENST00000403971 PTCRAQ6ISU1 281 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms