RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NBPF1Q3BBV0 1214 aa27.64■■■□□ 2.01
RTN4-207ENST00000402434 BRINP3Q76B58 766 aa27.64■■■□□ 2.01
RTN4-207ENST00000402434 CDC42BPGQ6DT37 1551 aa27.63■■■□□ 2.01
RTN4-207ENST00000402434 C1orf167Q5SNV9 1468 aa27.62■■■□□ 2.01
RTN4-207ENST00000402434 POGKQ9P215 609 aa27.61■■■□□ 2.01
RTN4-207ENST00000402434 TONSLQ96HA7 1378 aa27.6■■■□□ 2.01
RTN4-207ENST00000402434 CLSPNQ9HAW4 1339 aa27.59■■■□□ 2.01
RTN4-207ENST00000402434 SAFB2Q14151 953 aaKnown RBP eCLIP27.57■■■□□ 28e-8■■■□□ 19.2
RTN4-207ENST00000402434 AHDC1Q5TGY3 1603 aaPredicted RBP27.54■■■□□ 2
RTN4-207ENST00000402434 NBPF8Q3BBV2 869 aa27.54■■■□□ 2
RTN4-207ENST00000402434 ORAI2Q96SN7 254 aa27.53■■■□□ 2
RTN4-207ENST00000402434 PHLPP1O60346 1717 aa27.53■■■□□ 2
RTN4-207ENST00000402434 ARHGEF28Q8N1W1 1705 aaKnown RBP27.53■■■□□ 2
RTN4-207ENST00000402434 TRPM1Q7Z4N2 1603 aa27.52■■■□□ 2
RTN4-207ENST00000402434 ADGRB2O60241 1585 aa27.5■■□□□ 1.99
RTN4-207ENST00000402434 FMN2Q9NZ56 1722 aa27.5■■□□□ 1.99
RTN4-207ENST00000402434 COL16A1Q07092 1604 aaPredicted RBP27.5■■□□□ 1.99
RTN4-207ENST00000402434 NHSL1Q5SYE7 1610 aa27.48■■□□□ 1.99
RTN4-207ENST00000402434 MINK1Q8N4C8 1332 aaPredicted RBP27.47■■□□□ 1.99
RTN4-207ENST00000402434 NUTM2FA1L443 756 aa27.47■■□□□ 1.99
RTN4-207ENST00000402434 ESCO1Q5FWF5 840 aa27.47■■□□□ 1.99
RTN4-207ENST00000402434 ROCK2O75116 1388 aaKnown RBP27.47■■□□□ 1.99
RTN4-207ENST00000402434 HIRIP3Q9BW71 556 aaPredicted RBP27.46■■□□□ 1.99
RTN4-207ENST00000402434 GPRASP1Q5JY77 1395 aa27.45■■□□□ 1.99
RTN4-207ENST00000402434 DDX17Q92841 729 aaKnown RBP27.44■■□□□ 1.98
RTN4-207ENST00000402434 TIMELESSQ9UNS1 1208 aa27.44■■□□□ 1.98
RTN4-207ENST00000402434 JCADQ9P266 1359 aa27.44■■□□□ 1.98
RTN4-207ENST00000402434 WASLO00401 505 aaPredicted RBP27.44■■□□□ 1.98
RTN4-207ENST00000402434 CCER1Q8TC90 406 aaPredicted RBP27.42■■□□□ 1.98
RTN4-207ENST00000402434 ANKARQ7Z5J8 1434 aa27.41■■□□□ 1.98
RTN4-207ENST00000402434 SOS2Q07890 1332 aaPredicted RBP27.41■■□□□ 1.98
RTN4-207ENST00000402434 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
RTN4-207ENST00000402434 LRRC59Q96AG4 307 aaKnown RBP27.4■■□□□ 1.98
RTN4-207ENST00000402434 RALGAPBQ86X10 1494 aa27.4■■□□□ 1.98
RTN4-207ENST00000402434 EIF3AQ14152 1382 aaKnown RBP27.39■■□□□ 1.98
RTN4-207ENST00000402434 NPHP3Q7Z494 1330 aa27.38■■□□□ 1.97
RTN4-207ENST00000402434 FOXO3O43524 673 aa27.38■■□□□ 1.97
RTN4-207ENST00000402434 RGPD8O14715 1765 aaPredicted RBP27.37■■□□□ 1.97
RTN4-207ENST00000402434 MED1Q15648 1581 aaPredicted RBP27.37■■□□□ 1.97
RTN4-207ENST00000402434 USP32Q8NFA0 1604 aa27.37■■□□□ 1.97
RTN4-207ENST00000402434 TULP4Q9NRJ4 1543 aa27.36■■□□□ 1.97
RTN4-207ENST00000402434 PRR36Q9H6K5 1346 aa27.36■■□□□ 1.97
RTN4-207ENST00000402434 CARD11Q9BXL7 1154 aa27.35■■□□□ 1.97
RTN4-207ENST00000402434 PHF8Q9UPP1 1060 aa27.35■■□□□ 1.97
RTN4-207ENST00000402434 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
RTN4-207ENST00000402434 DISP3Q9P2K9 1392 aa27.34■■□□□ 1.97
RTN4-207ENST00000402434 KIF1AQ12756 1690 aa27.34■■□□□ 1.97
RTN4-207ENST00000402434 SPATA31A6Q5VVP1 1343 aa27.33■■□□□ 1.97
RTN4-207ENST00000402434 SHPRHQ149N8 1683 aa27.33■■□□□ 1.96
RTN4-207ENST00000402434 PXDNQ92626 1479 aa27.33■■□□□ 1.96
RTN4-207ENST00000402434 QRICH2Q9H0J4 1663 aa27.3■■□□□ 1.96
RTN4-207ENST00000402434 NUDT16Q96DE0 195 aaKnown RBP27.3■■□□□ 1.96
RTN4-207ENST00000402434 ATP7BP35670 1465 aa27.29■■□□□ 1.96
RTN4-207ENST00000402434 PNPLA6Q8IY17 1366 aa27.28■■□□□ 1.96
RTN4-207ENST00000402434 XPCQ01831 940 aaPredicted RBP27.28■■□□□ 1.96
RTN4-207ENST00000402434 PMFBP1Q8TBY8 1022 aa27.27■■□□□ 1.96
RTN4-207ENST00000402434 KRT28Q7Z3Y7 464 aa27.26■■□□□ 1.95
RTN4-207ENST00000402434 CCDC61Q9Y6R9 512 aa27.25■■□□□ 1.95
RTN4-207ENST00000402434 SBNO2Q9Y2G9 1366 aa27.24■■□□□ 1.95
RTN4-207ENST00000402434 PSME1Q06323 249 aa27.23■■□□□ 1.95
RTN4-207ENST00000402434 EVC2Q86UK5 1308 aa27.22■■□□□ 1.95
RTN4-207ENST00000402434 SRPK2P78362 688 aaKnown RBP27.22■■□□□ 1.95
RTN4-207ENST00000402434 LRP6O75581 1613 aa27.22■■□□□ 1.95
RTN4-207ENST00000402434 CABP2Q9NPB3 220 aa27.21■■□□□ 1.95
RTN4-207ENST00000402434 SPATA31A3Q5VYP0 1347 aa27.21■■□□□ 1.95
RTN4-207ENST00000402434 ITSN1Q15811 1721 aa27.2■■□□□ 1.95
RTN4-207ENST00000402434 SBNO1A3KN83 1393 aa27.2■■□□□ 1.94
RTN4-207ENST00000402434 PLEKHG3A1L390 1219 aa27.19■■□□□ 1.94
RTN4-207ENST00000402434 NGDNQ8NEJ9 315 aaKnown RBP27.19■■□□□ 1.94
RTN4-207ENST00000402434 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
RTN4-207ENST00000402434 TOPAZ1Q8N9V7 1692 aa27.18■■□□□ 1.94
RTN4-207ENST00000402434 COL22A1Q8NFW1 1626 aaPredicted RBP27.17■■□□□ 1.94
RTN4-207ENST00000402434 NUTM2BA6NNL0 878 aaPredicted RBP27.17■■□□□ 1.94
RTN4-207ENST00000402434 NUTM2EB1AL46 878 aaPredicted RBP27.17■■□□□ 1.94
RTN4-207ENST00000402434 NUTM2AQ8IVF1 878 aaPredicted RBP27.17■■□□□ 1.94
RTN4-207ENST00000402434 POLR3AO14802 1390 aaPredicted RBP27.16■■□□□ 1.94
RTN4-207ENST00000402434 RGS17Q9UGC6 210 aaPredicted RBP27.15■■□□□ 1.94
RTN4-207ENST00000402434 TNS3Q68CZ2 1445 aa27.15■■□□□ 1.94
RTN4-207ENST00000402434 ST20-MTHFSA0A0A6YYL1 179 aa27.13■■□□□ 1.93
RTN4-207ENST00000402434 ACEP12821 1306 aa27.13■■□□□ 1.93
RTN4-207ENST00000402434 TESK2Q96S53 571 aa27.13■■□□□ 1.93
RTN4-207ENST00000402434 PPIP5K1Q6PFW1 1433 aa27.12■■□□□ 1.93
RTN4-207ENST00000402434 MEX3CQ5U5Q3 659 aaKnown RBP27.12■■□□□ 1.93
RTN4-207ENST00000402434 TRPM3Q9HCF6 1732 aaPredicted RBP27.11■■□□□ 1.93
RTN4-207ENST00000402434 ARHGEF10O15013 1369 aa27.1■■□□□ 1.93
RTN4-207ENST00000402434 USP47Q96K76 1375 aa27.1■■□□□ 1.93
RTN4-207ENST00000402434 SLC24A1O60721 1099 aa27.1■■□□□ 1.93
RTN4-207ENST00000402434 CABP1Q9NZU7 370 aa27.1■■□□□ 1.93
RTN4-207ENST00000402434 ATAD2Q6PL18 1390 aa27.08■■□□□ 1.92
RTN4-207ENST00000402434 ILDR2Q71H61 639 aa27.06■■□□□ 1.92
RTN4-207ENST00000402434 PUS7Q96PZ0 661 aaKnown RBP27.06■■□□□ 1.92
RTN4-207ENST00000402434 LMOD2Q6P5Q4 547 aa27.06■■□□□ 1.92
RTN4-207ENST00000402434 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
RTN4-207ENST00000402434 ADAMTS2O95450 1211 aa27.05■■□□□ 1.92
RTN4-207ENST00000402434 PAK3O75914 559 aaPredicted RBP27.03■■□□□ 1.92
RTN4-207ENST00000402434 C8orf37Q96NL8 207 aa27.02■■□□□ 1.92
RTN4-207ENST00000402434 BRD4O60885 1362 aaPredicted RBP27.01■■□□□ 1.91
RTN4-207ENST00000402434 ZNF772Q68DY9 489 aaPredicted RBP27■■□□□ 1.91
RTN4-207ENST00000402434 POTEAQ6S8J7 498 aa27■■□□□ 1.91
RTN4-207ENST00000402434 CABLES1Q8TDN4 633 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms