RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ARHGEF28Q8N1W1 1705 aaKnown RBP30.16■■■□□ 2.42
RABGGTA-202ENST00000399409 KDM2BQ8NHM5 1336 aa30.15■■■□□ 2.42
RABGGTA-202ENST00000399409 CENPQQ7L2Z9 268 aaPredicted RBP30.15■■■□□ 2.42
RABGGTA-202ENST00000399409 SLC52A1Q9NWF4 448 aa30.15■■■□□ 2.42
RABGGTA-202ENST00000399409 CGNL1Q0VF96 1302 aa30.15■■■□□ 2.42
RABGGTA-202ENST00000399409 SHPRHQ149N8 1683 aa30.14■■■□□ 2.42
RABGGTA-202ENST00000399409 NSD2O96028 1365 aa30.13■■■□□ 2.41
RABGGTA-202ENST00000399409 ZBTB47Q9UFB7 747 aaPredicted RBP30.13■■■□□ 2.41
RABGGTA-202ENST00000399409 SPINK5Q9NQ38 1064 aaPredicted RBP30.11■■■□□ 2.41
RABGGTA-202ENST00000399409 TULP4Q9NRJ4 1543 aa30.11■■■□□ 2.41
RABGGTA-202ENST00000399409 ANKRD36BQ8N2N9 1353 aa30.11■■■□□ 2.41
RABGGTA-202ENST00000399409 PAK3O75914 559 aaPredicted RBP30.1■■■□□ 2.41
RABGGTA-202ENST00000399409 IDI1Q13907 227 aa30.08■■■□□ 2.41
RABGGTA-202ENST00000399409 RUNDC1Q96C34 613 aa30.08■■■□□ 2.41
RABGGTA-202ENST00000399409 CFAP53Q96M91 514 aa30.07■■■□□ 2.4
RABGGTA-202ENST00000399409 NINLQ9Y2I6 1382 aa30.06■■■□□ 2.4
RABGGTA-202ENST00000399409 WWC1Q8IX03 1113 aa30.06■■■□□ 2.4
RABGGTA-202ENST00000399409 YEATS2Q9ULM3 1422 aa30.06■■■□□ 2.4
RABGGTA-202ENST00000399409 PREX1Q8TCU6 1659 aa30.04■■■□□ 2.4
RABGGTA-202ENST00000399409 NCBP3Q53F19 620 aaKnown RBP30.03■■■□□ 2.4
RABGGTA-202ENST00000399409 IQSEC2Q5JU85 1478 aa30.03■■■□□ 2.4
RABGGTA-202ENST00000399409 NUTM2DQ5VT03 806 aaPredicted RBP30.02■■■□□ 2.4
RABGGTA-202ENST00000399409 TMEM131LA2VDJ0 1609 aa30.02■■■□□ 2.4
RABGGTA-202ENST00000399409 DMRT2Q9Y5R5 561 aa30.01■■■□□ 2.39
RABGGTA-202ENST00000399409 TNNT2P45379 298 aaPredicted RBP30■■■□□ 2.39
RABGGTA-202ENST00000399409 MTHFSP49914 203 aa30■■■□□ 2.39
RABGGTA-202ENST00000399409 PDE3AQ14432 1141 aa29.99■■■□□ 2.39
RABGGTA-202ENST00000399409 PHF23Q9BUL5 403 aaPredicted RBP29.99■■■□□ 2.39
RABGGTA-202ENST00000399409 BCAR3O75815 825 aa29.98■■■□□ 2.39
RABGGTA-202ENST00000399409 WDR63Q8IWG1 891 aa29.98■■■□□ 2.39
RABGGTA-202ENST00000399409 CCDC27Q2M243 656 aa29.97■■■□□ 2.39
RABGGTA-202ENST00000399409 NPM2Q86SE8 214 aaKnown RBP29.97■■■□□ 2.39
RABGGTA-202ENST00000399409 TCP11L2Q8N4U5 519 aa29.96■■■□□ 2.39
RABGGTA-202ENST00000399409 MYO5BQ9ULV0 1848 aa29.95■■■□□ 2.39
RABGGTA-202ENST00000399409 CABP2Q9NPB3 220 aa29.95■■■□□ 2.39
RABGGTA-202ENST00000399409 ABCC11Q96J66 1382 aa29.93■■■□□ 2.38
RABGGTA-202ENST00000399409 ATAD2Q6PL18 1390 aa29.93■■■□□ 2.38
RABGGTA-202ENST00000399409 PTPRMP28827 1452 aa29.92■■■□□ 2.38
RABGGTA-202ENST00000399409 CLTCQ00610 1675 aaKnown RBP29.9■■■□□ 2.38
RABGGTA-202ENST00000399409 DDRGK1Q96HY6 314 aa29.89■■■□□ 2.38
RABGGTA-202ENST00000399409 SKAP1Q86WV1 359 aa29.89■■■□□ 2.38
RABGGTA-202ENST00000399409 A0A1W2PP64 1363 aa29.89■■■□□ 2.37
RABGGTA-202ENST00000399409 YTHDC2Q9H6S0 1430 aaKnown RBP29.89■■■□□ 2.37
RABGGTA-202ENST00000399409 STK26Q9P289 416 aa29.88■■■□□ 2.37
RABGGTA-202ENST00000399409 PPP6R1Q9UPN7 881 aa29.88■■■□□ 2.37
RABGGTA-202ENST00000399409 SRPK2P78362 688 aaKnown RBP29.88■■■□□ 2.37
RABGGTA-202ENST00000399409 REREQ9P2R6 1566 aa29.88■■■□□ 2.37
RABGGTA-202ENST00000399409 AAMPQ13685 434 aa29.87■■■□□ 2.37
RABGGTA-202ENST00000399409 MED14O60244 1454 aa29.87■■■□□ 2.37
RABGGTA-202ENST00000399409 TERF2IPQ9NYB0 399 aa29.87■■■□□ 2.37
RABGGTA-202ENST00000399409 CANXP27824 592 aaKnown RBP29.86■■■□□ 2.37
RABGGTA-202ENST00000399409 NEUROD2Q15784 382 aa29.86■■■□□ 2.37
RABGGTA-202ENST00000399409 FAM161AQ3B820 660 aa29.86■■■□□ 2.37
RABGGTA-202ENST00000399409 RRP7AQ9Y3A4 280 aaKnown RBP29.86■■■□□ 2.37
RABGGTA-202ENST00000399409 SAFB2Q14151 953 aaKnown RBP eCLIP29.85■■■□□ 2.37
RABGGTA-202ENST00000399409 ADGRB2O60241 1585 aa29.85■■■□□ 2.37
RABGGTA-202ENST00000399409 AGLP35573 1532 aa29.84■■■□□ 2.37
RABGGTA-202ENST00000399409 ANKRD26Q9UPS8 1709 aa29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 RARSP54136 660 aaKnown RBP29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 MYH16Q9H6N6 1097 aa29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 POGKQ9P215 609 aa29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 ALKQ9UM73 1620 aa29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 U2AF1L5P0DN76 240 aaPredicted RBP29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 U2AF1Q01081 240 aaKnown RBP eCLIP29.83■■■□□ 2.37
RABGGTA-202ENST00000399409 PRAM1Q96QH2 718 aa29.82■■■□□ 2.36
RABGGTA-202ENST00000399409 NBR1Q14596 966 aa29.82■■■□□ 2.36
RABGGTA-202ENST00000399409 CLUAP1Q96AJ1 413 aa29.8■■■□□ 2.36
RABGGTA-202ENST00000399409 DIP2BQ9P265 1576 aa29.79■■■□□ 2.36
RABGGTA-202ENST00000399409 FBXO31Q5XUX0 539 aaPredicted RBP29.79■■■□□ 2.36
RABGGTA-202ENST00000399409 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
RABGGTA-202ENST00000399409 MINK1Q8N4C8 1332 aaPredicted RBP29.79■■■□□ 2.36
RABGGTA-202ENST00000399409 CD163L1Q9NR16 1453 aa29.77■■■□□ 2.36
RABGGTA-202ENST00000399409 FAM69CQ0P6D2 419 aa29.77■■■□□ 2.36
RABGGTA-202ENST00000399409 C8orf34Q49A92 452 aa29.77■■■□□ 2.36
RABGGTA-202ENST00000399409 COL3A1P02461 1466 aaPredicted RBP29.77■■■□□ 2.36
RABGGTA-202ENST00000399409 HDGFL2Q7Z4V5 671 aaPredicted RBP29.76■■■□□ 2.35
RABGGTA-202ENST00000399409 PANK1Q8TE04 598 aa29.76■■■□□ 2.35
RABGGTA-202ENST00000399409 STAG3Q9UJ98 1225 aa29.76■■■□□ 2.35
RABGGTA-202ENST00000399409 CT47B1P0C2W7 299 aaPredicted RBP29.75■■■□□ 2.35
RABGGTA-202ENST00000399409 RTL5Q5HYW3 569 aaPredicted RBP29.75■■■□□ 2.35
RABGGTA-202ENST00000399409 DLC1Q96QB1 1528 aa29.75■■■□□ 2.35
RABGGTA-202ENST00000399409 COG6Q9Y2V7 657 aa29.75■■■□□ 2.35
RABGGTA-202ENST00000399409 ARHGEF40Q8TER5 1519 aa29.74■■■□□ 2.35
RABGGTA-202ENST00000399409 GGNBP2Q9H3C7 697 aa29.74■■■□□ 2.35
RABGGTA-202ENST00000399409 NLRP1Q9C000 1473 aa29.74■■■□□ 2.35
RABGGTA-202ENST00000399409 FYB1O15117 783 aa29.74■■■□□ 2.35
RABGGTA-202ENST00000399409 FRAT1Q92837 279 aaPredicted RBP29.74■■■□□ 2.35
RABGGTA-202ENST00000399409 IGHDP01880 384 aa29.73■■■□□ 2.35
RABGGTA-202ENST00000399409 RGS3P49796 1198 aa29.72■■■□□ 2.35
RABGGTA-202ENST00000399409 CDK19Q9BWU1 502 aa29.71■■■□□ 2.35
RABGGTA-202ENST00000399409 SPATA31D1Q6ZQQ2 1576 aa29.71■■■□□ 2.35
RABGGTA-202ENST00000399409 PLEKHF1Q96S99 279 aa29.71■■■□□ 2.35
RABGGTA-202ENST00000399409 MAPK8IP3Q9UPT6 1336 aa29.7■■■□□ 2.35
RABGGTA-202ENST00000399409 PMFBP1Q8TBY8 1022 aa29.7■■■□□ 2.35
RABGGTA-202ENST00000399409 DEKP35659 375 aaKnown RBP29.7■■■□□ 2.34
RABGGTA-202ENST00000399409 A2ML1A8K2U0 1454 aa29.69■■■□□ 2.34
RABGGTA-202ENST00000399409 PPM1GO15355 546 aaPredicted RBP29.69■■■□□ 2.34
RABGGTA-202ENST00000399409 PNNQ9H307 717 aaKnown RBP29.69■■■□□ 2.34
RABGGTA-202ENST00000399409 RIMBP3CA6NJZ7 1639 aa29.67■■■□□ 2.34
RABGGTA-202ENST00000399409 RIMBP3BA6NNM3 1639 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms