RNA–Protein interactions for RNA: ENST00000396861.5

GAPDH-205, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GAPDH, Length 1,348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-205ENST00000396861 TONSLQ96HA7 1378 aa18.54■□□□□ 0.56
GAPDH-205ENST00000396861 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
GAPDH-205ENST00000396861 DLC1Q96QB1 1528 aa18.54■□□□□ 0.56
GAPDH-205ENST00000396861 PHLPP1O60346 1717 aa18.53■□□□□ 0.56
GAPDH-205ENST00000396861 NBPF1Q3BBV0 1214 aa18.53■□□□□ 0.56
GAPDH-205ENST00000396861 CLSPNQ9HAW4 1339 aa18.53■□□□□ 0.56
GAPDH-205ENST00000396861 DCCP43146 1447 aa18.53■□□□□ 0.56
GAPDH-205ENST00000396861 JCADQ9P266 1359 aa18.52■□□□□ 0.56
GAPDH-205ENST00000396861 ATF3P18847 181 aa18.52■□□□□ 0.56
GAPDH-205ENST00000396861 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
GAPDH-205ENST00000396861 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
GAPDH-205ENST00000396861 TRAK1Q9UPV9 953 aa18.52■□□□□ 0.56
GAPDH-205ENST00000396861 ARHGEF28Q8N1W1 1705 aaKnown RBP18.52■□□□□ 0.56
GAPDH-205ENST00000396861 NBPF8Q3BBV2 869 aa18.51■□□□□ 0.55
GAPDH-205ENST00000396861 UPF1Q92900 1129 aaKnown RBP eCLIP18.51■□□□□ 0.55
GAPDH-205ENST00000396861 CCER1Q8TC90 406 aaPredicted RBP18.49■□□□□ 0.55
GAPDH-205ENST00000396861 PRAM1Q96QH2 718 aa18.49■□□□□ 0.55
GAPDH-205ENST00000396861 MST1RQ04912 1400 aa18.49■□□□□ 0.55
GAPDH-205ENST00000396861 COL16A1Q07092 1604 aaPredicted RBP18.48■□□□□ 0.55
GAPDH-205ENST00000396861 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
GAPDH-205ENST00000396861 SAFB2Q14151 953 aaKnown RBP eCLIP18.47■□□□□ 0.55
GAPDH-205ENST00000396861 POGKQ9P215 609 aa18.47■□□□□ 0.55
GAPDH-205ENST00000396861 LRP6O75581 1613 aa18.46■□□□□ 0.55
GAPDH-205ENST00000396861 FMN2Q9NZ56 1722 aa18.45■□□□□ 0.54
GAPDH-205ENST00000396861 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
GAPDH-205ENST00000396861 C1orf167Q5SNV9 1468 aa18.43■□□□□ 0.54
GAPDH-205ENST00000396861 ZNF772Q68DY9 489 aaPredicted RBP18.42■□□□□ 0.54
GAPDH-205ENST00000396861 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
GAPDH-205ENST00000396861 SPATA31A6Q5VVP1 1343 aa18.42■□□□□ 0.54
GAPDH-205ENST00000396861 ROCK2O75116 1388 aaKnown RBP18.42■□□□□ 0.54
GAPDH-205ENST00000396861 ADGRB2O60241 1585 aa18.42■□□□□ 0.54
GAPDH-205ENST00000396861 TIMELESSQ9UNS1 1208 aa18.41■□□□□ 0.54
GAPDH-205ENST00000396861 RALGAPBQ86X10 1494 aa18.4■□□□□ 0.54
GAPDH-205ENST00000396861 GPRASP1Q5JY77 1395 aa18.4■□□□□ 0.54
GAPDH-205ENST00000396861 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
GAPDH-205ENST00000396861 NUTM2FA1L443 756 aa18.39■□□□□ 0.53
GAPDH-205ENST00000396861 ORAI2Q96SN7 254 aa18.39■□□□□ 0.53
GAPDH-205ENST00000396861 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
GAPDH-205ENST00000396861 NHSL1Q5SYE7 1610 aa18.38■□□□□ 0.53
GAPDH-205ENST00000396861 MEX3CQ5U5Q3 659 aaKnown RBP18.38■□□□□ 0.53
GAPDH-205ENST00000396861 AHDC1Q5TGY3 1603 aaPredicted RBP18.38■□□□□ 0.53
GAPDH-205ENST00000396861 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
GAPDH-205ENST00000396861 QRICH2Q9H0J4 1663 aa18.37■□□□□ 0.53
GAPDH-205ENST00000396861 USP32Q8NFA0 1604 aa18.36■□□□□ 0.53
GAPDH-205ENST00000396861 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
GAPDH-205ENST00000396861 RXRBP28702 533 aa18.35■□□□□ 0.53
GAPDH-205ENST00000396861 CARD11Q9BXL7 1154 aa18.35■□□□□ 0.53
GAPDH-205ENST00000396861 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
GAPDH-205ENST00000396861 ESCO1Q5FWF5 840 aa18.34■□□□□ 0.53
GAPDH-205ENST00000396861 DDX17Q92841 729 aaKnown RBP18.34■□□□□ 0.53
GAPDH-205ENST00000396861 CDK12Q9NYV4 1490 aaPredicted RBP18.33■□□□□ 0.53
GAPDH-205ENST00000396861 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
GAPDH-205ENST00000396861 PRR36Q9H6K5 1346 aa18.31■□□□□ 0.52
GAPDH-205ENST00000396861 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
GAPDH-205ENST00000396861 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
GAPDH-205ENST00000396861 CDK19Q9BWU1 502 aa18.3■□□□□ 0.52
GAPDH-205ENST00000396861 EIF3AQ14152 1382 aaKnown RBP18.29■□□□□ 0.52
GAPDH-205ENST00000396861 ITSN1Q15811 1721 aa18.28■□□□□ 0.52
GAPDH-205ENST00000396861 PHF8Q9UPP1 1060 aa18.27■□□□□ 0.52
GAPDH-205ENST00000396861 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
GAPDH-205ENST00000396861 ATP7BP35670 1465 aa18.27■□□□□ 0.51
GAPDH-205ENST00000396861 NUTM2BA6NNL0 878 aaPredicted RBP18.26■□□□□ 0.51
GAPDH-205ENST00000396861 NUTM2EB1AL46 878 aaPredicted RBP18.26■□□□□ 0.51
GAPDH-205ENST00000396861 FOXO3O43524 673 aa18.26■□□□□ 0.51
GAPDH-205ENST00000396861 NUTM2AQ8IVF1 878 aaPredicted RBP18.26■□□□□ 0.51
GAPDH-205ENST00000396861 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
GAPDH-205ENST00000396861 AFF2P51816 1311 aa18.26■□□□□ 0.51
GAPDH-205ENST00000396861 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
GAPDH-205ENST00000396861 NPHP3Q7Z494 1330 aa18.25■□□□□ 0.51
GAPDH-205ENST00000396861 PXDNQ92626 1479 aa18.25■□□□□ 0.51
GAPDH-205ENST00000396861 PMFBP1Q8TBY8 1022 aa18.24■□□□□ 0.51
GAPDH-205ENST00000396861 LRRC59Q96AG4 307 aaKnown RBP18.23■□□□□ 0.51
GAPDH-205ENST00000396861 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
GAPDH-205ENST00000396861 RGS12O14924 1447 aa18.23■□□□□ 0.51
GAPDH-205ENST00000396861 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
GAPDH-205ENST00000396861 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
GAPDH-205ENST00000396861 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
GAPDH-205ENST00000396861 EVC2Q86UK5 1308 aa18.21■□□□□ 0.51
GAPDH-205ENST00000396861 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
GAPDH-205ENST00000396861 KRT28Q7Z3Y7 464 aa18.21■□□□□ 0.51
GAPDH-205ENST00000396861 RBM6P78332 1123 aaKnown RBP18.2■□□□□ 0.5
GAPDH-205ENST00000396861 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
GAPDH-205ENST00000396861 USP47Q96K76 1375 aa18.19■□□□□ 0.5
GAPDH-205ENST00000396861 EP400Q96L91 3159 aa18.19■□□□□ 0.5
GAPDH-205ENST00000396861 TESK2Q96S53 571 aa18.19■□□□□ 0.5
GAPDH-205ENST00000396861 QTRT2Q9H974 415 aaKnown RBP18.19■□□□□ 0.5
GAPDH-205ENST00000396861 PNPLA6Q8IY17 1366 aa18.18■□□□□ 0.5
GAPDH-205ENST00000396861 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-205ENST00000396861 PSME1Q06323 249 aa18.18■□□□□ 0.5
GAPDH-205ENST00000396861 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
GAPDH-205ENST00000396861 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
GAPDH-205ENST00000396861 PPIP5K1Q6PFW1 1433 aa18.16■□□□□ 0.5
GAPDH-205ENST00000396861 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
GAPDH-205ENST00000396861 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
GAPDH-205ENST00000396861 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
GAPDH-205ENST00000396861 ACEP12821 1306 aa18.15■□□□□ 0.5
GAPDH-205ENST00000396861 SPATA31A3Q5VYP0 1347 aa18.15■□□□□ 0.5
GAPDH-205ENST00000396861 CABP1Q9NZU7 370 aa18.14■□□□□ 0.49
GAPDH-205ENST00000396861 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
GAPDH-205ENST00000396861 SBNO1A3KN83 1393 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms