RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
TNFSF13-204ENST00000396542 MST1RQ04912 1400 aa25.56■■□□□ 1.68
TNFSF13-204ENST00000396542 NBPF1Q3BBV0 1214 aa25.55■■□□□ 1.68
TNFSF13-204ENST00000396542 TRAK1Q9UPV9 953 aa25.54■■□□□ 1.68
TNFSF13-204ENST00000396542 PRAM1Q96QH2 718 aa25.53■■□□□ 1.68
TNFSF13-204ENST00000396542 NBPF8Q3BBV2 869 aa25.52■■□□□ 1.68
TNFSF13-204ENST00000396542 ADGRB2O60241 1585 aa25.52■■□□□ 1.68
TNFSF13-204ENST00000396542 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
TNFSF13-204ENST00000396542 FMN2Q9NZ56 1722 aa25.5■■□□□ 1.67
TNFSF13-204ENST00000396542 HSPA1LP34931 641 aa25.48■■□□□ 1.67
TNFSF13-204ENST00000396542 TIMELESSQ9UNS1 1208 aa25.48■■□□□ 1.67
TNFSF13-204ENST00000396542 C1orf167Q5SNV9 1468 aa25.47■■□□□ 1.67
TNFSF13-204ENST00000396542 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
TNFSF13-204ENST00000396542 POGKQ9P215 609 aa25.47■■□□□ 1.67
TNFSF13-204ENST00000396542 GPRASP1Q5JY77 1395 aa25.46■■□□□ 1.67
TNFSF13-204ENST00000396542 ROCK2O75116 1388 aaKnown RBP25.45■■□□□ 1.67
TNFSF13-204ENST00000396542 SAFB2Q14151 953 aaKnown RBP eCLIP25.44■■□□□ 1.66
TNFSF13-204ENST00000396542 BRINP3Q76B58 766 aa25.44■■□□□ 1.66
TNFSF13-204ENST00000396542 AHDC1Q5TGY3 1603 aaPredicted RBP25.44■■□□□ 1.66
TNFSF13-204ENST00000396542 PHLPP1O60346 1717 aa25.43■■□□□ 1.66
TNFSF13-204ENST00000396542 NHSL1Q5SYE7 1610 aa25.42■■□□□ 1.66
TNFSF13-204ENST00000396542 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.66
TNFSF13-204ENST00000396542 COL16A1Q07092 1604 aaPredicted RBP25.39■■□□□ 1.66
TNFSF13-204ENST00000396542 USP32Q8NFA0 1604 aa25.38■■□□□ 1.65
TNFSF13-204ENST00000396542 RGPD8O14715 1765 aaPredicted RBP25.38■■□□□ 1.65
TNFSF13-204ENST00000396542 MINK1Q8N4C8 1332 aaPredicted RBP25.37■■□□□ 1.65
TNFSF13-204ENST00000396542 CENPJQ9HC77 1338 aaPredicted RBP25.36■■□□□ 1.65
TNFSF13-204ENST00000396542 ORAI2Q96SN7 254 aa25.35■■□□□ 1.65
TNFSF13-204ENST00000396542 HIRIP3Q9BW71 556 aaPredicted RBP25.35■■□□□ 1.65
TNFSF13-204ENST00000396542 ANKARQ7Z5J8 1434 aa25.35■■□□□ 1.65
TNFSF13-204ENST00000396542 TULP4Q9NRJ4 1543 aa25.34■■□□□ 1.65
TNFSF13-204ENST00000396542 KIF1AQ12756 1690 aa25.34■■□□□ 1.65
TNFSF13-204ENST00000396542 EIF3AQ14152 1382 aaKnown RBP25.32■■□□□ 1.64
TNFSF13-204ENST00000396542 NUTM2FA1L443 756 aa25.32■■□□□ 1.64
TNFSF13-204ENST00000396542 WASLO00401 505 aaPredicted RBP25.32■■□□□ 1.64
TNFSF13-204ENST00000396542 CARD11Q9BXL7 1154 aa25.32■■□□□ 1.64
TNFSF13-204ENST00000396542 ESCO1Q5FWF5 840 aa25.3■■□□□ 1.64
TNFSF13-204ENST00000396542 ITSN1Q15811 1721 aa25.28■■□□□ 1.64
TNFSF13-204ENST00000396542 ATP7BP35670 1465 aa25.27■■□□□ 1.64
TNFSF13-204ENST00000396542 TOPAZ1Q8N9V7 1692 aa25.26■■□□□ 1.63
TNFSF13-204ENST00000396542 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
TNFSF13-204ENST00000396542 PRR36Q9H6K5 1346 aa25.26■■□□□ 1.63
TNFSF13-204ENST00000396542 SHPRHQ149N8 1683 aa25.26■■□□□ 1.63
TNFSF13-204ENST00000396542 PXDNQ92626 1479 aa25.24■■□□□ 1.63
TNFSF13-204ENST00000396542 SBNO2Q9Y2G9 1366 aa25.24■■□□□ 1.63
TNFSF13-204ENST00000396542 SOS2Q07890 1332 aaPredicted RBP25.24■■□□□ 1.63
TNFSF13-204ENST00000396542 CDK19Q9BWU1 502 aa25.24■■□□□ 1.63
TNFSF13-204ENST00000396542 JCADQ9P266 1359 aa25.23■■□□□ 1.63
TNFSF13-204ENST00000396542 NPHP3Q7Z494 1330 aa25.22■■□□□ 1.63
TNFSF13-204ENST00000396542 PHF8Q9UPP1 1060 aa25.22■■□□□ 1.63
TNFSF13-204ENST00000396542 FOXO3O43524 673 aa25.2■■□□□ 1.62
TNFSF13-204ENST00000396542 NUDT16Q96DE0 195 aaKnown RBP25.19■■□□□ 1.62
TNFSF13-204ENST00000396542 MED1Q15648 1581 aaPredicted RBP25.18■■□□□ 1.62
TNFSF13-204ENST00000396542 LRRC59Q96AG4 307 aaKnown RBP25.18■■□□□ 1.62
TNFSF13-204ENST00000396542 EVC2Q86UK5 1308 aa25.16■■□□□ 1.62
TNFSF13-204ENST00000396542 USP47Q96K76 1375 aa25.15■■□□□ 1.62
TNFSF13-204ENST00000396542 SRPK2P78362 688 aaKnown RBP25.14■■□□□ 1.62
TNFSF13-204ENST00000396542 PMFBP1Q8TBY8 1022 aa25.14■■□□□ 1.62
TNFSF13-204ENST00000396542 CCDC61Q9Y6R9 512 aa25.14■■□□□ 1.62
TNFSF13-204ENST00000396542 COL22A1Q8NFW1 1626 aaPredicted RBP25.14■■□□□ 1.61
TNFSF13-204ENST00000396542 PNPLA6Q8IY17 1366 aa25.14■■□□□ 1.61
TNFSF13-204ENST00000396542 TRPM3Q9HCF6 1732 aaPredicted RBP25.13■■□□□ 1.61
TNFSF13-204ENST00000396542 CABP2Q9NPB3 220 aa25.13■■□□□ 1.61
TNFSF13-204ENST00000396542 ST20-MTHFSA0A0A6YYL1 179 aa25.12■■□□□ 1.61
TNFSF13-204ENST00000396542 XPCQ01831 940 aaPredicted RBP25.12■■□□□ 1.61
TNFSF13-204ENST00000396542 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
TNFSF13-204ENST00000396542 POLR3AO14802 1390 aaPredicted RBP25.11■■□□□ 1.61
TNFSF13-204ENST00000396542 TESK2Q96S53 571 aa25.11■■□□□ 1.61
TNFSF13-204ENST00000396542 PLEKHG3A1L390 1219 aa25.1■■□□□ 1.61
TNFSF13-204ENST00000396542 KRT28Q7Z3Y7 464 aa25.1■■□□□ 1.61
TNFSF13-204ENST00000396542 PPIP5K1Q6PFW1 1433 aa25.1■■□□□ 1.61
TNFSF13-204ENST00000396542 LRP6O75581 1613 aa25.08■■□□□ 1.61
TNFSF13-204ENST00000396542 SBNO1A3KN83 1393 aa25.08■■□□□ 1.61
TNFSF13-204ENST00000396542 PSME1Q06323 249 aa25.08■■□□□ 1.61
TNFSF13-204ENST00000396542 SPATA31A3Q5VYP0 1347 aa25.08■■□□□ 1.6
TNFSF13-204ENST00000396542 ALS2Q96Q42 1657 aa25.07■■□□□ 1.6
TNFSF13-204ENST00000396542 TNS3Q68CZ2 1445 aa25.06■■□□□ 1.6
TNFSF13-204ENST00000396542 NGDNQ8NEJ9 315 aaKnown RBP25.06■■□□□ 1.6
TNFSF13-204ENST00000396542 ATAD2Q6PL18 1390 aa25.05■■□□□ 1.6
TNFSF13-204ENST00000396542 SLC24A1O60721 1099 aa25.05■■□□□ 1.6
TNFSF13-204ENST00000396542 ACEP12821 1306 aa25.05■■□□□ 1.6
TNFSF13-204ENST00000396542 PUS7Q96PZ0 661 aaKnown RBP25.03■■□□□ 1.6
TNFSF13-204ENST00000396542 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
TNFSF13-204ENST00000396542 AKAP12Q02952 1782 aa25.02■■□□□ 1.6
TNFSF13-204ENST00000396542 ARHGEF10O15013 1369 aa25■■□□□ 1.59
TNFSF13-204ENST00000396542 ABCA3Q99758 1704 aa24.99■■□□□ 1.59
TNFSF13-204ENST00000396542 DISP3Q9P2K9 1392 aa24.99■■□□□ 1.59
TNFSF13-204ENST00000396542 MARF1Q9Y4F3 1742 aaKnown RBP24.97■■□□□ 1.59
TNFSF13-204ENST00000396542 CRYBG1Q9Y4K1 1723 aa24.97■■□□□ 1.59
TNFSF13-204ENST00000396542 CPSF1Q10570 1443 aaKnown RBP24.96■■□□□ 1.59
TNFSF13-204ENST00000396542 BRD4O60885 1362 aaPredicted RBP24.96■■□□□ 1.59
TNFSF13-204ENST00000396542 NUTM2BA6NNL0 878 aaPredicted RBP24.96■■□□□ 1.59
TNFSF13-204ENST00000396542 NUTM2EB1AL46 878 aaPredicted RBP24.96■■□□□ 1.59
TNFSF13-204ENST00000396542 TMF1P82094 1093 aa24.96■■□□□ 1.59
TNFSF13-204ENST00000396542 NUTM2AQ8IVF1 878 aaPredicted RBP24.96■■□□□ 1.59
TNFSF13-204ENST00000396542 USP6P35125 1406 aa24.95■■□□□ 1.59
TNFSF13-204ENST00000396542 MON2Q7Z3U7 1717 aa24.95■■□□□ 1.59
TNFSF13-204ENST00000396542 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.58
TNFSF13-204ENST00000396542 CD163L1Q9NR16 1453 aa24.95■■□□□ 1.58
TNFSF13-204ENST00000396542 NRKQ7Z2Y5 1582 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms