RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
CDKN1B-202ENST00000396340 PHF23Q9BUL5 403 aaPredicted RBP27.92■■■□□ 2.06
CDKN1B-202ENST00000396340 SPATA31A6Q5VVP1 1343 aa27.92■■■□□ 2.06
CDKN1B-202ENST00000396340 LRRC59Q96AG4 307 aaKnown RBP27.9■■■□□ 2.06
CDKN1B-202ENST00000396340 SHPRHQ149N8 1683 aa27.9■■■□□ 2.06
CDKN1B-202ENST00000396340 ADGRB1O14514 1584 aa27.89■■■□□ 2.05
CDKN1B-202ENST00000396340 POGKQ9P215 609 aa27.88■■■□□ 2.05
CDKN1B-202ENST00000396340 WAPLQ7Z5K2 1190 aa27.87■■■□□ 2.05
CDKN1B-202ENST00000396340 EIF3AQ14152 1382 aaKnown RBP27.86■■■□□ 2.05
CDKN1B-202ENST00000396340 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
CDKN1B-202ENST00000396340 PRAM1Q96QH2 718 aa27.83■■■□□ 2.05
CDKN1B-202ENST00000396340 NPHP3Q7Z494 1330 aa27.83■■■□□ 2.05
CDKN1B-202ENST00000396340 KIF1AQ12756 1690 aa27.81■■■□□ 2.04
CDKN1B-202ENST00000396340 ESCO1Q5FWF5 840 aa27.8■■■□□ 2.04
CDKN1B-202ENST00000396340 ADGRB2O60241 1585 aa27.8■■■□□ 2.04
CDKN1B-202ENST00000396340 TRAK1Q9UPV9 953 aa27.79■■■□□ 2.04
CDKN1B-202ENST00000396340 PLEKHH1Q9ULM0 1364 aa27.77■■■□□ 2.04
CDKN1B-202ENST00000396340 SOS2Q07890 1332 aaPredicted RBP27.76■■■□□ 2.03
CDKN1B-202ENST00000396340 ANKARQ7Z5J8 1434 aa27.75■■■□□ 2.03
CDKN1B-202ENST00000396340 ARHGEF28Q8N1W1 1705 aaKnown RBP27.75■■■□□ 2.03
CDKN1B-202ENST00000396340 ORAI2Q96SN7 254 aa27.75■■■□□ 2.03
CDKN1B-202ENST00000396340 L3MBTL2Q969R5 705 aa27.73■■■□□ 2.03
CDKN1B-202ENST00000396340 NEUROD1Q13562 356 aa27.71■■■□□ 2.03
CDKN1B-202ENST00000396340 MEX3CQ5U5Q3 659 aaKnown RBP27.71■■■□□ 2.03
CDKN1B-202ENST00000396340 PSME1Q06323 249 aa27.68■■■□□ 2.02
CDKN1B-202ENST00000396340 SAFB2Q14151 953 aaKnown RBP eCLIP27.68■■■□□ 2.02
CDKN1B-202ENST00000396340 SIN3AQ96ST3 1273 aa27.68■■■□□ 2.02
CDKN1B-202ENST00000396340 RGPD8O14715 1765 aaPredicted RBP27.68■■■□□ 2.02
CDKN1B-202ENST00000396340 ITSN1Q15811 1721 aa27.67■■■□□ 2.02
CDKN1B-202ENST00000396340 PNPLA6Q8IY17 1366 aa27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 TONSLQ96HA7 1378 aa27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 WASLO00401 505 aaPredicted RBP27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 FOXO3O43524 673 aa27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 ZNF772Q68DY9 489 aaPredicted RBP27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 PHF8Q9UPP1 1060 aa27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 TULP4Q9NRJ4 1543 aa27.65■■■□□ 2.02
CDKN1B-202ENST00000396340 PXDNQ92626 1479 aa27.64■■■□□ 2.01
CDKN1B-202ENST00000396340 TRPM1Q7Z4N2 1603 aa27.63■■■□□ 2.01
CDKN1B-202ENST00000396340 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
CDKN1B-202ENST00000396340 NUTM2FA1L443 756 aa27.63■■■□□ 2.01
CDKN1B-202ENST00000396340 ILDR2Q71H61 639 aa27.62■■■□□ 2.01
CDKN1B-202ENST00000396340 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
CDKN1B-202ENST00000396340 SOCS7O14512 581 aa27.61■■■□□ 2.01
CDKN1B-202ENST00000396340 DDX17Q92841 729 aaKnown RBP27.61■■■□□ 2.01
CDKN1B-202ENST00000396340 CLSPNQ9HAW4 1339 aa27.61■■■□□ 2.01
CDKN1B-202ENST00000396340 ROCK2O75116 1388 aaKnown RBP27.59■■■□□ 2.01
CDKN1B-202ENST00000396340 NBPF1Q3BBV0 1214 aa27.58■■■□□ 2.01
CDKN1B-202ENST00000396340 CENPJQ9HC77 1338 aaPredicted RBP27.58■■■□□ 2.01
CDKN1B-202ENST00000396340 LRP6O75581 1613 aa27.57■■■□□ 2
CDKN1B-202ENST00000396340 NUTM2BA6NNL0 878 aaPredicted RBP27.57■■■□□ 2
CDKN1B-202ENST00000396340 NUTM2EB1AL46 878 aaPredicted RBP27.57■■■□□ 2
CDKN1B-202ENST00000396340 KRT28Q7Z3Y7 464 aa27.57■■■□□ 2
CDKN1B-202ENST00000396340 NUTM2AQ8IVF1 878 aaPredicted RBP27.57■■■□□ 2
CDKN1B-202ENST00000396340 HIRIP3Q9BW71 556 aaPredicted RBP27.57■■■□□ 2
CDKN1B-202ENST00000396340 GPRASP1Q5JY77 1395 aa27.57■■■□□ 2
CDKN1B-202ENST00000396340 USP32Q8NFA0 1604 aa27.56■■■□□ 2
CDKN1B-202ENST00000396340 SBNO1A3KN83 1393 aa27.56■■■□□ 2
CDKN1B-202ENST00000396340 ARHGEF10O15013 1369 aa27.54■■■□□ 2
CDKN1B-202ENST00000396340 RGS17Q9UGC6 210 aaPredicted RBP27.54■■■□□ 2
CDKN1B-202ENST00000396340 SPATA31A3Q5VYP0 1347 aa27.53■■■□□ 2
CDKN1B-202ENST00000396340 TIMELESSQ9UNS1 1208 aa27.53■■■□□ 2
CDKN1B-202ENST00000396340 QRICH2Q9H0J4 1663 aa27.52■■■□□ 2
CDKN1B-202ENST00000396340 MARF1Q9Y4F3 1742 aaKnown RBP27.51■■□□□ 1.99
CDKN1B-202ENST00000396340 SLC24A1O60721 1099 aa27.51■■□□□ 1.99
CDKN1B-202ENST00000396340 CCDC61Q9Y6R9 512 aa27.51■■□□□ 1.99
CDKN1B-202ENST00000396340 TNS3Q68CZ2 1445 aa27.5■■□□□ 1.99
CDKN1B-202ENST00000396340 CDK19Q9BWU1 502 aa27.5■■□□□ 1.99
CDKN1B-202ENST00000396340 NGDNQ8NEJ9 315 aaKnown RBP27.49■■□□□ 1.99
CDKN1B-202ENST00000396340 NUDT16Q96DE0 195 aaKnown RBP27.49■■□□□ 1.99
CDKN1B-202ENST00000396340 ATP7BP35670 1465 aa27.48■■□□□ 1.99
CDKN1B-202ENST00000396340 EVC2Q86UK5 1308 aa27.46■■□□□ 1.99
CDKN1B-202ENST00000396340 XPCQ01831 940 aaPredicted RBP27.46■■□□□ 1.99
CDKN1B-202ENST00000396340 PMFBP1Q8TBY8 1022 aa27.46■■□□□ 1.99
CDKN1B-202ENST00000396340 NGLY1Q96IV0 654 aa27.46■■□□□ 1.99
CDKN1B-202ENST00000396340 C8orf37Q96NL8 207 aa27.45■■□□□ 1.98
CDKN1B-202ENST00000396340 RALGAPBQ86X10 1494 aa27.44■■□□□ 1.98
CDKN1B-202ENST00000396340 TOPAZ1Q8N9V7 1692 aa27.44■■□□□ 1.98
CDKN1B-202ENST00000396340 SRPK2P78362 688 aaKnown RBP27.44■■□□□ 1.98
CDKN1B-202ENST00000396340 BRD4O60885 1362 aaPredicted RBP27.44■■□□□ 1.98
CDKN1B-202ENST00000396340 AFF2P51816 1311 aa27.43■■□□□ 1.98
CDKN1B-202ENST00000396340 PRR36Q9H6K5 1346 aa27.43■■□□□ 1.98
CDKN1B-202ENST00000396340 HAP1P54257 671 aaPredicted RBP27.43■■□□□ 1.98
CDKN1B-202ENST00000396340 POTEAQ6S8J7 498 aa27.43■■□□□ 1.98
CDKN1B-202ENST00000396340 ADAMTS2O95450 1211 aa27.42■■□□□ 1.98
CDKN1B-202ENST00000396340 CARD11Q9BXL7 1154 aa27.42■■□□□ 1.98
CDKN1B-202ENST00000396340 SBNO2Q9Y2G9 1366 aa27.42■■□□□ 1.98
CDKN1B-202ENST00000396340 PLEKHG3A1L390 1219 aa27.41■■□□□ 1.98
CDKN1B-202ENST00000396340 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
CDKN1B-202ENST00000396340 TRPM3Q9HCF6 1732 aaPredicted RBP27.41■■□□□ 1.98
CDKN1B-202ENST00000396340 POLR3AO14802 1390 aaPredicted RBP27.4■■□□□ 1.98
CDKN1B-202ENST00000396340 RXRBP28702 533 aa27.4■■□□□ 1.98
CDKN1B-202ENST00000396340 FNBP4Q8N3X1 1017 aaPredicted RBP27.4■■□□□ 1.98
CDKN1B-202ENST00000396340 CDK12Q9NYV4 1490 aaPredicted RBP27.38■■□□□ 1.97
CDKN1B-202ENST00000396340 ALS2Q96Q42 1657 aa27.38■■□□□ 1.97
CDKN1B-202ENST00000396340 NBPF8Q3BBV2 869 aa27.38■■□□□ 1.97
CDKN1B-202ENST00000396340 LMOD2Q6P5Q4 547 aa27.38■■□□□ 1.97
CDKN1B-202ENST00000396340 QTRT2Q9H974 415 aaKnown RBP27.35■■□□□ 1.97
CDKN1B-202ENST00000396340 USP21Q9UK80 565 aa27.35■■□□□ 1.97
CDKN1B-202ENST00000396340 TRPC5Q9UL62 973 aaPredicted RBP27.35■■□□□ 1.97
CDKN1B-202ENST00000396340 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms