RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
UPK3A-202ENST00000396082 ADGRB1O14514 1584 aa25.35■■□□□ 1.65
UPK3A-202ENST00000396082 SIRT1Q96EB6 747 aa25.35■■□□□ 1.65
UPK3A-202ENST00000396082 ILDR2Q71H61 639 aa25.34■■□□□ 1.65
UPK3A-202ENST00000396082 DLC1Q96QB1 1528 aa25.33■■□□□ 1.65
UPK3A-202ENST00000396082 POGKQ9P215 609 aa25.33■■□□□ 1.65
UPK3A-202ENST00000396082 SAFB2Q14151 953 aaKnown RBP eCLIP25.32■■□□□ 1.64
UPK3A-202ENST00000396082 PRAM1Q96QH2 718 aa25.32■■□□□ 1.64
UPK3A-202ENST00000396082 ORAI2Q96SN7 254 aa25.32■■□□□ 1.64
UPK3A-202ENST00000396082 DDX17Q92841 729 aaKnown RBP25.31■■□□□ 1.64
UPK3A-202ENST00000396082 TRAK1Q9UPV9 953 aa25.31■■□□□ 1.64
UPK3A-202ENST00000396082 SHPRHQ149N8 1683 aa25.31■■□□□ 1.64
UPK3A-202ENST00000396082 NUTM2FA1L443 756 aa25.3■■□□□ 1.64
UPK3A-202ENST00000396082 FMN2Q9NZ56 1722 aa25.29■■□□□ 1.64
UPK3A-202ENST00000396082 ESCO1Q5FWF5 840 aa25.29■■□□□ 1.64
UPK3A-202ENST00000396082 NEUROD1Q13562 356 aa25.28■■□□□ 1.64
UPK3A-202ENST00000396082 SIN3AQ96ST3 1273 aa25.28■■□□□ 1.64
UPK3A-202ENST00000396082 LRRC59Q96AG4 307 aaKnown RBP25.27■■□□□ 1.64
UPK3A-202ENST00000396082 SPATA31A6Q5VVP1 1343 aa25.27■■□□□ 1.64
UPK3A-202ENST00000396082 KIAA1210Q9ULL0 1709 aa25.26■■□□□ 1.63
UPK3A-202ENST00000396082 MEX3CQ5U5Q3 659 aaKnown RBP25.23■■□□□ 1.63
UPK3A-202ENST00000396082 L3MBTL2Q969R5 705 aa25.22■■□□□ 1.63
UPK3A-202ENST00000396082 ARHGEF28Q8N1W1 1705 aaKnown RBP25.22■■□□□ 1.63
UPK3A-202ENST00000396082 NPHP3Q7Z494 1330 aa25.21■■□□□ 1.63
UPK3A-202ENST00000396082 LRP6O75581 1613 aa25.2■■□□□ 1.62
UPK3A-202ENST00000396082 SOS2Q07890 1332 aaPredicted RBP25.2■■□□□ 1.62
UPK3A-202ENST00000396082 MINK1Q8N4C8 1332 aaPredicted RBP25.2■■□□□ 1.62
UPK3A-202ENST00000396082 ADGRB2O60241 1585 aa25.2■■□□□ 1.62
UPK3A-202ENST00000396082 NUTM2BA6NNL0 878 aaPredicted RBP25.2■■□□□ 1.62
UPK3A-202ENST00000396082 NUTM2EB1AL46 878 aaPredicted RBP25.2■■□□□ 1.62
UPK3A-202ENST00000396082 NUTM2AQ8IVF1 878 aaPredicted RBP25.2■■□□□ 1.62
UPK3A-202ENST00000396082 KIF1AQ12756 1690 aa25.2■■□□□ 1.62
UPK3A-202ENST00000396082 HIRIP3Q9BW71 556 aaPredicted RBP25.19■■□□□ 1.62
UPK3A-202ENST00000396082 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
UPK3A-202ENST00000396082 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
UPK3A-202ENST00000396082 FOXO3O43524 673 aa25.18■■□□□ 1.62
UPK3A-202ENST00000396082 XPCQ01831 940 aaPredicted RBP25.15■■□□□ 1.62
UPK3A-202ENST00000396082 NBPF1Q3BBV0 1214 aa25.15■■□□□ 1.62
UPK3A-202ENST00000396082 RGS17Q9UGC6 210 aaPredicted RBP25.15■■□□□ 1.62
UPK3A-202ENST00000396082 EIF3AQ14152 1382 aaKnown RBP25.15■■□□□ 1.62
UPK3A-202ENST00000396082 PXDNQ92626 1479 aa25.14■■□□□ 1.61
UPK3A-202ENST00000396082 ANKARQ7Z5J8 1434 aa25.13■■□□□ 1.61
UPK3A-202ENST00000396082 PHF8Q9UPP1 1060 aa25.13■■□□□ 1.61
UPK3A-202ENST00000396082 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
UPK3A-202ENST00000396082 TONSLQ96HA7 1378 aa25.1■■□□□ 1.61
UPK3A-202ENST00000396082 WASLO00401 505 aaPredicted RBP25.1■■□□□ 1.61
UPK3A-202ENST00000396082 SOCS7O14512 581 aa25.1■■□□□ 1.61
UPK3A-202ENST00000396082 TULP4Q9NRJ4 1543 aa25.1■■□□□ 1.61
UPK3A-202ENST00000396082 TRPM1Q7Z4N2 1603 aa25.09■■□□□ 1.61
UPK3A-202ENST00000396082 COL22A1Q8NFW1 1626 aaPredicted RBP25.06■■□□□ 1.6
UPK3A-202ENST00000396082 POTEAQ6S8J7 498 aa25.06■■□□□ 1.6
UPK3A-202ENST00000396082 KRT28Q7Z3Y7 464 aa25.06■■□□□ 1.6
UPK3A-202ENST00000396082 PMFBP1Q8TBY8 1022 aa25.06■■□□□ 1.6
UPK3A-202ENST00000396082 ROCK2O75116 1388 aaKnown RBP25.05■■□□□ 1.6
UPK3A-202ENST00000396082 ZNF772Q68DY9 489 aaPredicted RBP25.05■■□□□ 1.6
UPK3A-202ENST00000396082 ADAMTS2O95450 1211 aa25.04■■□□□ 1.6
UPK3A-202ENST00000396082 PSME1Q06323 249 aa25.04■■□□□ 1.6
UPK3A-202ENST00000396082 C8orf37Q96NL8 207 aa25.04■■□□□ 1.6
UPK3A-202ENST00000396082 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
UPK3A-202ENST00000396082 ITSN1Q15811 1721 aa25.03■■□□□ 1.6
UPK3A-202ENST00000396082 PRR36Q9H6K5 1346 aa25.03■■□□□ 1.6
UPK3A-202ENST00000396082 QRICH2Q9H0J4 1663 aa25.01■■□□□ 1.59
UPK3A-202ENST00000396082 AFF2P51816 1311 aa25.01■■□□□ 1.59
UPK3A-202ENST00000396082 SPATA31A3Q5VYP0 1347 aa25.01■■□□□ 1.59
UPK3A-202ENST00000396082 CDK19Q9BWU1 502 aa25■■□□□ 1.59
UPK3A-202ENST00000396082 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
UPK3A-202ENST00000396082 ATP7BP35670 1465 aa24.99■■□□□ 1.59
UPK3A-202ENST00000396082 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
UPK3A-202ENST00000396082 GPRASP1Q5JY77 1395 aa24.98■■□□□ 1.59
UPK3A-202ENST00000396082 NBPF8Q3BBV2 869 aa24.98■■□□□ 1.59
UPK3A-202ENST00000396082 LMOD2Q6P5Q4 547 aa24.98■■□□□ 1.59
UPK3A-202ENST00000396082 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
UPK3A-202ENST00000396082 NUDT16Q96DE0 195 aaKnown RBP24.98■■□□□ 1.59
UPK3A-202ENST00000396082 NGLY1Q96IV0 654 aa24.98■■□□□ 1.59
UPK3A-202ENST00000396082 SBNO1A3KN83 1393 aa24.96■■□□□ 1.59
UPK3A-202ENST00000396082 SRPK2P78362 688 aaKnown RBP24.95■■□□□ 1.58
UPK3A-202ENST00000396082 PLEKHG5O94827 1062 aa24.94■■□□□ 1.58
UPK3A-202ENST00000396082 HAP1P54257 671 aaPredicted RBP24.94■■□□□ 1.58
UPK3A-202ENST00000396082 MARF1Q9Y4F3 1742 aaKnown RBP24.94■■□□□ 1.58
UPK3A-202ENST00000396082 ARHGEF10O15013 1369 aa24.93■■□□□ 1.58
UPK3A-202ENST00000396082 TOPAZ1Q8N9V7 1692 aa24.93■■□□□ 1.58
UPK3A-202ENST00000396082 TRPM3Q9HCF6 1732 aaPredicted RBP24.92■■□□□ 1.58
UPK3A-202ENST00000396082 CCDC61Q9Y6R9 512 aa24.91■■□□□ 1.58
UPK3A-202ENST00000396082 RALGAPBQ86X10 1494 aa24.9■■□□□ 1.58
UPK3A-202ENST00000396082 CARD11Q9BXL7 1154 aa24.9■■□□□ 1.58
UPK3A-202ENST00000396082 PAK3O75914 559 aaPredicted RBP24.89■■□□□ 1.58
UPK3A-202ENST00000396082 CABP2Q9NPB3 220 aa24.89■■□□□ 1.58
UPK3A-202ENST00000396082 RXRBP28702 533 aa24.88■■□□□ 1.57
UPK3A-202ENST00000396082 USP21Q9UK80 565 aa24.88■■□□□ 1.57
UPK3A-202ENST00000396082 EVC2Q86UK5 1308 aa24.87■■□□□ 1.57
UPK3A-202ENST00000396082 CABLES1Q8TDN4 633 aa24.87■■□□□ 1.57
UPK3A-202ENST00000396082 ALS2Q96Q42 1657 aa24.86■■□□□ 1.57
UPK3A-202ENST00000396082 QTRT2Q9H974 415 aaKnown RBP24.86■■□□□ 1.57
UPK3A-202ENST00000396082 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
UPK3A-202ENST00000396082 PPIP5K1Q6PFW1 1433 aa24.86■■□□□ 1.57
UPK3A-202ENST00000396082 ACEP12821 1306 aa24.85■■□□□ 1.57
UPK3A-202ENST00000396082 POLR3AO14802 1390 aaPredicted RBP24.84■■□□□ 1.57
UPK3A-202ENST00000396082 FNBP4Q8N3X1 1017 aaPredicted RBP24.84■■□□□ 1.57
UPK3A-202ENST00000396082 PLEKHG3A1L390 1219 aa24.83■■□□□ 1.57
UPK3A-202ENST00000396082 RBM6P78332 1123 aaKnown RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms