RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 NEUROD2Q15784 382 aa7.62□□□□□ -1.19
MDM2-208ENST00000393410 MYSM1Q5VVJ2 828 aa7.62□□□□□ -1.19
MDM2-208ENST00000393410 RSBN1LQ6PCB5 846 aaPredicted RBP7.62□□□□□ -1.19
MDM2-208ENST00000393410 PCDHB15Q9Y5E8 787 aa7.62□□□□□ -1.19
MDM2-208ENST00000393410 SPTLC1O15269 473 aa7.61□□□□□ -1.19
MDM2-208ENST00000393410 EMID1Q96A84 441 aaPredicted RBP7.61□□□□□ -1.19
MDM2-208ENST00000393410 LIMD1Q9UGP4 676 aa7.61□□□□□ -1.19
MDM2-208ENST00000393410 GGCXP38435 758 aa7.6□□□□□ -1.19
MDM2-208ENST00000393410 DIXDC1Q155Q3 683 aa7.6□□□□□ -1.19
MDM2-208ENST00000393410 MSS51Q4VC12 460 aa7.6□□□□□ -1.19
MDM2-208ENST00000393410 RIC3Q7Z5B4 369 aa7.6□□□□□ -1.19
MDM2-208ENST00000393410 USB1Q9BQ65 265 aaKnown RBP7.6□□□□□ -1.19
MDM2-208ENST00000393410 RGS20O76081 388 aa7.59□□□□□ -1.19
MDM2-208ENST00000393410 GJA5P36382 358 aa7.59□□□□□ -1.19
MDM2-208ENST00000393410 C6orf229H3BNL8 230 aa7.58□□□□□ -1.2
MDM2-208ENST00000393410 PLA2G2CQ5R387 149 aa7.58□□□□□ -1.2
MDM2-208ENST00000393410 ANKLE1Q8NAG6 615 aa7.58□□□□□ -1.2
MDM2-208ENST00000393410 MMP16P51512 607 aa7.57□□□□□ -1.2
MDM2-208ENST00000393410 RETREG3Q86VR2 466 aa7.57□□□□□ -1.2
MDM2-208ENST00000393410 CABLES1Q8TDN4 633 aa7.57□□□□□ -1.2
MDM2-208ENST00000393410 DDRGK1Q96HY6 314 aa7.57□□□□□ -1.2
MDM2-208ENST00000393410 PRKD2Q9BZL6 878 aa7.57□□□□□ -1.2
MDM2-208ENST00000393410 POLR3EQ9NVU0 708 aa7.57□□□□□ -1.2
MDM2-208ENST00000393410 DXOO77932 396 aaKnown RBP7.56□□□□□ -1.2
MDM2-208ENST00000393410 MTMR2Q13614 643 aa7.56□□□□□ -1.2
MDM2-208ENST00000393410 CSPP1Q1MSJ5 1256 aa7.56□□□□□ -1.2
MDM2-208ENST00000393410 FCF1Q9Y324 198 aaKnown RBP7.56□□□□□ -1.2
MDM2-208ENST00000393410 HRCP23327 699 aa7.55□□□□□ -1.2
MDM2-208ENST00000393410 CLK2P49760 499 aaKnown RBP7.55□□□□□ -1.2
MDM2-208ENST00000393410 QPCTQ16769 361 aa7.55□□□□□ -1.2
MDM2-208ENST00000393410 SH3D19Q5HYK7 790 aa7.55□□□□□ -1.2
MDM2-208ENST00000393410 LIAT1Q6ZQX7 453 aa7.55□□□□□ -1.2
MDM2-208ENST00000393410 IL27Q8NEV9 243 aa7.55□□□□□ -1.2
MDM2-208ENST00000393410 RSPH6AQ9H0K4 717 aa7.55□□□□□ -1.2
MDM2-208ENST00000393410 TUSC1Q2TAM9 212 aa7.54□□□□□ -1.2
MDM2-208ENST00000393410 FBXO31Q5XUX0 539 aaPredicted RBP7.54□□□□□ -1.2
MDM2-208ENST00000393410 PROCA1Q8NCQ7 364 aaPredicted RBP7.54□□□□□ -1.2
MDM2-208ENST00000393410 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
MDM2-208ENST00000393410 CFAP99D6REC4 459 aa7.53□□□□□ -1.2
MDM2-208ENST00000393410 LILRB3O75022 631 aa7.53□□□□□ -1.2
MDM2-208ENST00000393410 JUNDP17535 347 aa7.53□□□□□ -1.2
MDM2-208ENST00000393410 SKIV2LQ15477 1246 aaKnown RBP7.53□□□□□ -1.2
MDM2-208ENST00000393410 PRPF38BQ5VTL8 546 aaKnown RBP7.53□□□□□ -1.2
MDM2-208ENST00000393410 V9GY48 417 aaPredicted RBP7.53□□□□□ -1.2
MDM2-208ENST00000393410 SPDYE5A6NIY4 337 aa7.52□□□□□ -1.21
MDM2-208ENST00000393410 SLC19A1P41440 591 aa7.52□□□□□ -1.21
MDM2-208ENST00000393410 RTL5Q5HYW3 569 aaPredicted RBP7.52□□□□□ -1.21
MDM2-208ENST00000393410 ZBTB3Q9H5J0 574 aa7.52□□□□□ -1.21
MDM2-208ENST00000393410 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.51□□□□□ -1.21
MDM2-208ENST00000393410 SPRYD7Q5W111 196 aa7.5□□□□□ -1.21
MDM2-208ENST00000393410 NUTM2BA6NNL0 878 aaPredicted RBP7.49□□□□□ -1.21
MDM2-208ENST00000393410 NUTM2EB1AL46 878 aaPredicted RBP7.49□□□□□ -1.21
MDM2-208ENST00000393410 NUTM2DQ5VT03 806 aaPredicted RBP7.49□□□□□ -1.21
MDM2-208ENST00000393410 NUTM2AQ8IVF1 878 aaPredicted RBP7.49□□□□□ -1.21
MDM2-208ENST00000393410 CCDC24Q8N4L8 307 aa7.49□□□□□ -1.21
MDM2-208ENST00000393410 DESI1Q6ICB0 168 aa7.48□□□□□ -1.21
MDM2-208ENST00000393410 PTCRAQ6ISU1 281 aaPredicted RBP7.48□□□□□ -1.21
MDM2-208ENST00000393410 NUDT12Q9BQG2 462 aa7.48□□□□□ -1.21
MDM2-208ENST00000393410 PER1O15534 1290 aaPredicted RBP7.47□□□□□ -1.21
MDM2-208ENST00000393410 RPIAP49247 311 aa7.47□□□□□ -1.21
MDM2-208ENST00000393410 LYPD8Q6UX82 237 aa7.47□□□□□ -1.21
MDM2-208ENST00000393410 GOPCQ9HD26 462 aa7.47□□□□□ -1.21
MDM2-208ENST00000393410 PTPRNQ16849 979 aa7.46□□□□□ -1.22
MDM2-208ENST00000393410 TRIM67Q6ZTA4 783 aa7.46□□□□□ -1.22
MDM2-208ENST00000393410 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
MDM2-208ENST00000393410 CCNYL3P0C7X3 344 aa7.45□□□□□ -1.22
MDM2-208ENST00000393410 ZNF697Q5TEC3 545 aa7.45□□□□□ -1.22
MDM2-208ENST00000393410 PPP2R2DQ66LE6 453 aa7.45□□□□□ -1.22
MDM2-208ENST00000393410 EVA1BQ9NVM1 165 aa7.45□□□□□ -1.22
MDM2-208ENST00000393410 TRIM32Q13049 653 aa7.44□□□□□ -1.22
MDM2-208ENST00000393410 TSC1Q92574 1164 aa7.44□□□□□ -1.22
MDM2-208ENST00000393410 IRX2Q9BZI1 471 aaPredicted RBP7.44□□□□□ -1.22
MDM2-208ENST00000393410 ATP1B4Q9UN42 357 aaPredicted RBP7.44□□□□□ -1.22
MDM2-208ENST00000393410 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
MDM2-208ENST00000393410 F12P00748 615 aaPredicted RBP7.43□□□□□ -1.22
MDM2-208ENST00000393410 CTDSPL2Q05D32 466 aa7.43□□□□□ -1.22
MDM2-208ENST00000393410 KCNH2Q12809 1159 aa7.43□□□□□ -1.22
MDM2-208ENST00000393410 PCMTD1Q96MG8 357 aaPredicted RBP7.43□□□□□ -1.22
MDM2-208ENST00000393410 GDF9O60383 454 aa7.42□□□□□ -1.22
MDM2-208ENST00000393410 CD2BP2O95400 341 aaKnown RBP7.42□□□□□ -1.22
MDM2-208ENST00000393410 PKD2L1Q9P0L9 805 aa7.42□□□□□ -1.22
MDM2-208ENST00000393410 MAP10Q9P2G4 905 aa7.42□□□□□ -1.22
MDM2-208ENST00000393410 GFRA3O60609 400 aa7.41□□□□□ -1.22
MDM2-208ENST00000393410 SKOR1P84550 965 aa7.41□□□□□ -1.22
MDM2-208ENST00000393410 UNC93B1Q9H1C4 597 aa7.41□□□□□ -1.22
MDM2-208ENST00000393410 TNFRSF10AO00220 468 aa7.4□□□□□ -1.22
MDM2-208ENST00000393410 CTHP32929 405 aa7.4□□□□□ -1.22
MDM2-208ENST00000393410 RFC5P40937 340 aa7.4□□□□□ -1.22
MDM2-208ENST00000393410 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
MDM2-208ENST00000393410 LRRN4Q8WUT4 740 aa7.4□□□□□ -1.22
MDM2-208ENST00000393410 PDZRN3Q9UPQ7 1066 aa7.4□□□□□ -1.22
MDM2-208ENST00000393410 FOXC1Q12948 553 aa7.39□□□□□ -1.23
MDM2-208ENST00000393410 AP1G2O75843 785 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 PRR20EP86478 221 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 PRR20CP86479 221 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 PRR20DP86480 221 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 PRR20BP86481 221 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 PRR20AP86496 221 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
MDM2-208ENST00000393410 BAP1Q92560 729 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms