RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
PTPA-207ENST00000393370 RBM25P49756 843 aaKnown RBP21.34■■□□□ 1.01
PTPA-207ENST00000393370 SASS6Q6UVJ0 657 aa21.34■■□□□ 1.01
PTPA-207ENST00000393370 WDR7Q9Y4E6 1490 aa21.34■■□□□ 1.01
PTPA-207ENST00000393370 PIK3C2GO75747 1445 aa21.33■■□□□ 1.01
PTPA-207ENST00000393370 CSPP1Q1MSJ5 1256 aa21.33■■□□□ 1.01
PTPA-207ENST00000393370 PLXNC1O60486 1568 aa21.33■■□□□ 1
PTPA-207ENST00000393370 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
PTPA-207ENST00000393370 WWC1Q8IX03 1113 aa21.32■■□□□ 1
PTPA-207ENST00000393370 RBSNQ9H1K0 784 aa21.32■■□□□ 1
PTPA-207ENST00000393370 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
PTPA-207ENST00000393370 ZNF445P59923 1031 aa21.32■■□□□ 1
PTPA-207ENST00000393370 PBRM1Q86U86 1689 aa21.32■■□□□ 1
PTPA-207ENST00000393370 GOLGA6L22H0YM25 854 aa21.31■■□□□ 1
PTPA-207ENST00000393370 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
PTPA-207ENST00000393370 JARID2Q92833 1246 aaPredicted RBP21.3■■□□□ 1
PTPA-207ENST00000393370 STAC3Q96MF2 364 aa21.3■■□□□ 1
PTPA-207ENST00000393370 BCL11BQ9C0K0 894 aaPredicted RBP21.29■■□□□ 1
PTPA-207ENST00000393370 BAG4O95429 457 aaKnown RBP21.28■■□□□ 1
PTPA-207ENST00000393370 ZSCAN23Q3MJ62 389 aa21.28■■□□□ 1
PTPA-207ENST00000393370 CAVIN1Q6NZI2 390 aaKnown RBP21.28■■□□□ 1
PTPA-207ENST00000393370 CROCC2H7BZ55 1655 aa21.27■■□□□ 1
PTPA-207ENST00000393370 CBX1P83916 185 aa21.27■■□□□ 1
PTPA-207ENST00000393370 KIF2CQ99661 725 aa21.27■■□□□ 1
PTPA-207ENST00000393370 NCLP19338 710 aaKnown RBP21.27■□□□□ 0.99
PTPA-207ENST00000393370 TNNT2P45379 298 aaPredicted RBP21.26■□□□□ 0.99
PTPA-207ENST00000393370 CLEC17AQ6ZS10 378 aa21.26■□□□□ 0.99
PTPA-207ENST00000393370 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
PTPA-207ENST00000393370 TSC1Q92574 1164 aa21.25■□□□□ 0.99
PTPA-207ENST00000393370 A2MP01023 1474 aa21.25■□□□□ 0.99
PTPA-207ENST00000393370 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
PTPA-207ENST00000393370 MCM5P33992 734 aa21.25■□□□□ 0.99
PTPA-207ENST00000393370 NEUROD2Q15784 382 aa21.25■□□□□ 0.99
PTPA-207ENST00000393370 LAMC1P11047 1609 aa21.24■□□□□ 0.99
PTPA-207ENST00000393370 MVPQ14764 893 aaKnown RBP21.24■□□□□ 0.99
PTPA-207ENST00000393370 GAS2L2Q8NHY3 880 aa21.24■□□□□ 0.99
PTPA-207ENST00000393370 GTPBP4Q9BZE4 634 aaKnown RBP21.24■□□□□ 0.99
PTPA-207ENST00000393370 K7ELQ4 463 aaPredicted RBP21.24■□□□□ 0.99
PTPA-207ENST00000393370 PRG4Q92954 1404 aaPredicted RBP21.24■□□□□ 0.99
PTPA-207ENST00000393370 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
PTPA-207ENST00000393370 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 KIF20AO95235 890 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 NGEFQ8N5V2 710 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 ZBTB7CA1YPR0 619 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 MCTP1Q6DN14 999 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 ZNF710Q8N1W2 664 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 PTPRGP23470 1445 aa21.23■□□□□ 0.99
PTPA-207ENST00000393370 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
PTPA-207ENST00000393370 NUP153P49790 1475 aaKnown RBP21.22■□□□□ 0.99
PTPA-207ENST00000393370 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
PTPA-207ENST00000393370 MYRIPQ8NFW9 859 aa21.21■□□□□ 0.99
PTPA-207ENST00000393370 RRP7AQ9Y3A4 280 aaKnown RBP21.21■□□□□ 0.99
PTPA-207ENST00000393370 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
PTPA-207ENST00000393370 NAP1L2Q9ULW6 460 aaPredicted RBP21.2■□□□□ 0.98
PTPA-207ENST00000393370 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
PTPA-207ENST00000393370 CCDC39Q9UFE4 941 aa21.2■□□□□ 0.98
PTPA-207ENST00000393370 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
PTPA-207ENST00000393370 LMBRD1Q9NUN5 540 aa21.19■□□□□ 0.98
PTPA-207ENST00000393370 LETM1O95202 739 aaPredicted RBP21.18■□□□□ 0.98
PTPA-207ENST00000393370 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
PTPA-207ENST00000393370 TMEM51Q9NW97 253 aa21.18■□□□□ 0.98
PTPA-207ENST00000393370 RBM27Q9P2N5 1060 aaKnown RBP21.18■□□□□ 0.98
PTPA-207ENST00000393370 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
PTPA-207ENST00000393370 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
PTPA-207ENST00000393370 ARHGAP31Q2M1Z3 1444 aa21.17■□□□□ 0.98
PTPA-207ENST00000393370 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
PTPA-207ENST00000393370 FTSJ3Q8IY81 847 aaKnown RBP21.16■□□□□ 0.98
PTPA-207ENST00000393370 ADCY10Q96PN6 1610 aa21.16■□□□□ 0.98
PTPA-207ENST00000393370 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
PTPA-207ENST00000393370 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
PTPA-207ENST00000393370 DNTTIP2Q5QJE6 756 aaKnown RBP21.15■□□□□ 0.98
PTPA-207ENST00000393370 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
PTPA-207ENST00000393370 SHROOM2Q13796 1616 aa21.14■□□□□ 0.98
PTPA-207ENST00000393370 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
PTPA-207ENST00000393370 FAM177BA6PVY3 158 aa21.14■□□□□ 0.97
PTPA-207ENST00000393370 AK9Q5TCS8 1911 aa21.14■□□□□ 0.97
PTPA-207ENST00000393370 PDIA4P13667 645 aaKnown RBP21.13■□□□□ 0.97
PTPA-207ENST00000393370 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
PTPA-207ENST00000393370 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
PTPA-207ENST00000393370 ZKSCAN2Q63HK3 967 aa21.13■□□□□ 0.97
PTPA-207ENST00000393370 GPT2Q8TD30 523 aa21.13■□□□□ 0.97
PTPA-207ENST00000393370 PLA2R1Q13018 1463 aa21.12■□□□□ 0.97
PTPA-207ENST00000393370 SYNMO15061 1565 aa21.12■□□□□ 0.97
PTPA-207ENST00000393370 PKP1Q13835 747 aa21.12■□□□□ 0.97
PTPA-207ENST00000393370 LNPKQ9C0E8 428 aa21.12■□□□□ 0.97
PTPA-207ENST00000393370 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTPA-207ENST00000393370 SYCE3A1L190 88 aa21.1■□□□□ 0.97
PTPA-207ENST00000393370 SPDYE4A6NLX3 237 aa21.1■□□□□ 0.97
PTPA-207ENST00000393370 PRPF40AO75400 957 aaKnown RBP21.1■□□□□ 0.97
PTPA-207ENST00000393370 RNF214Q8ND24 703 aa21.1■□□□□ 0.97
PTPA-207ENST00000393370 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
PTPA-207ENST00000393370 EIF2AK4Q9P2K8 1649 aaKnown RBP21.1■□□□□ 0.97
PTPA-207ENST00000393370 IGSF3O75054 1194 aa21.1■□□□□ 0.97
PTPA-207ENST00000393370 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
PTPA-207ENST00000393370 PTMAP06454 111 aaKnown RBP21.09■□□□□ 0.97
PTPA-207ENST00000393370 TSPY4P0CV99 314 aa21.09■□□□□ 0.97
PTPA-207ENST00000393370 TSPY10P0CW01 314 aa21.09■□□□□ 0.97
PTPA-207ENST00000393370 GTF2F1P35269 517 aaKnown RBP eCLIP21.09■□□□□ 0.976e-11■■■■■ 32.8
PTPA-207ENST00000393370 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
PTPA-207ENST00000393370 PRIMPOLQ96LW4 560 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms