RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ZNF692Q9BU19 519 aaPredicted RBP20.73■□□□□ 0.91
SNX9-201ENST00000392185 ITSN2Q9NZM3 1697 aa20.73■□□□□ 0.91
SNX9-201ENST00000392185 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
SNX9-201ENST00000392185 USP35Q9P2H5 1018 aa20.71■□□□□ 0.91
SNX9-201ENST00000392185 BCAR3O75815 825 aa20.71■□□□□ 0.91
SNX9-201ENST00000392185 NAP1L2Q9ULW6 460 aaPredicted RBP20.71■□□□□ 0.91
SNX9-201ENST00000392185 GPRASP1Q5JY77 1395 aa20.71■□□□□ 0.91
SNX9-201ENST00000392185 GOLGA6L22H0YM25 854 aa20.71■□□□□ 0.91
SNX9-201ENST00000392185 HSCBQ8IWL3 235 aa20.71■□□□□ 0.91
SNX9-201ENST00000392185 RAPGEF4Q8WZA2 1011 aa20.71■□□□□ 0.91
SNX9-201ENST00000392185 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
SNX9-201ENST00000392185 FKBP5Q13451 457 aaPredicted RBP20.7■□□□□ 0.9
SNX9-201ENST00000392185 AMOTL2Q9Y2J4 779 aa20.7■□□□□ 0.9
SNX9-201ENST00000392185 DUOX2Q9NRD8 1548 aa20.69■□□□□ 0.9
SNX9-201ENST00000392185 PDE4AP27815 886 aa20.69■□□□□ 0.9
SNX9-201ENST00000392185 FAM135AQ9P2D6 1515 aa20.69■□□□□ 0.9
SNX9-201ENST00000392185 NME9Q86XW9 330 aa20.68■□□□□ 0.9
SNX9-201ENST00000392185 ZNF518AQ6AHZ1 1483 aa20.68■□□□□ 0.9
SNX9-201ENST00000392185 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
SNX9-201ENST00000392185 SYTL4Q96C24 671 aaPredicted RBP20.67■□□□□ 0.9
SNX9-201ENST00000392185 DDX19BQ9UMR2 479 aa20.67■□□□□ 0.9
SNX9-201ENST00000392185 FBLN1P23142 703 aa20.67■□□□□ 0.9
SNX9-201ENST00000392185 TTC5Q8N0Z6 440 aa20.66■□□□□ 0.9
SNX9-201ENST00000392185 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
SNX9-201ENST00000392185 API5Q9BZZ5 524 aaKnown RBP20.64■□□□□ 0.9
SNX9-201ENST00000392185 THUMPD2Q9BTF0 503 aaKnown RBP20.64■□□□□ 0.89
SNX9-201ENST00000392185 PZPP20742 1482 aa20.64■□□□□ 0.89
SNX9-201ENST00000392185 KIAA1211Q6ZU35 1233 aa20.63■□□□□ 0.89
SNX9-201ENST00000392185 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
SNX9-201ENST00000392185 TAF7LQ5H9L4 462 aa20.62■□□□□ 0.89
SNX9-201ENST00000392185 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
SNX9-201ENST00000392185 KIF16BQ96L93 1317 aa20.62■□□□□ 0.89
SNX9-201ENST00000392185 ABCC10Q5T3U5 1492 aa20.61■□□□□ 0.89
SNX9-201ENST00000392185 SLC4A3P48751 1232 aa20.61■□□□□ 0.89
SNX9-201ENST00000392185 MCCP23508 829 aa20.61■□□□□ 0.89
SNX9-201ENST00000392185 ZC3H6P61129 1189 aaKnown RBP20.61■□□□□ 0.89
SNX9-201ENST00000392185 PRAG1Q86YV5 1406 aa20.61■□□□□ 0.89
SNX9-201ENST00000392185 FOXO3O43524 673 aa20.6■□□□□ 0.89
SNX9-201ENST00000392185 LNPKQ9C0E8 428 aa20.6■□□□□ 0.89
SNX9-201ENST00000392185 GORABQ5T7V8 394 aa20.6■□□□□ 0.89
SNX9-201ENST00000392185 TESK2Q96S53 571 aa20.6■□□□□ 0.89
SNX9-201ENST00000392185 C9orf78Q9NZ63 289 aaPredicted RBP20.6■□□□□ 0.89
SNX9-201ENST00000392185 AIMP1Q12904 312 aaKnown RBP20.59■□□□□ 0.89
SNX9-201ENST00000392185 WWC1Q8IX03 1113 aa20.59■□□□□ 0.89
SNX9-201ENST00000392185 TWISTNBQ3B726 338 aaPredicted RBP20.59■□□□□ 0.89
SNX9-201ENST00000392185 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
SNX9-201ENST00000392185 HDAC5Q9UQL6 1122 aa20.59■□□□□ 0.89
SNX9-201ENST00000392185 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.89
SNX9-201ENST00000392185 STRN4Q9NRL3 753 aa20.58■□□□□ 0.89
SNX9-201ENST00000392185 FAM161AQ3B820 660 aa20.58■□□□□ 0.88
SNX9-201ENST00000392185 IPO9Q96P70 1041 aaKnown RBP20.57■□□□□ 0.88
SNX9-201ENST00000392185 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
SNX9-201ENST00000392185 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
SNX9-201ENST00000392185 SHANK2Q9UPX8 1470 aa20.56■□□□□ 0.88
SNX9-201ENST00000392185 RILPL2Q969X0 211 aa20.56■□□□□ 0.88
SNX9-201ENST00000392185 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
SNX9-201ENST00000392185 DCTN1Q14203 1278 aa20.56■□□□□ 0.88
SNX9-201ENST00000392185 NOL8Q76FK4 1167 aaKnown RBP20.56■□□□□ 0.88
SNX9-201ENST00000392185 TNRQ92752 1358 aa20.56■□□□□ 0.88
SNX9-201ENST00000392185 ZNF428Q96B54 188 aa20.55■□□□□ 0.88
SNX9-201ENST00000392185 GTF2E1P29083 439 aaPredicted RBP20.55■□□□□ 0.88
SNX9-201ENST00000392185 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
SNX9-201ENST00000392185 NEXNQ0ZGT2 675 aa20.54■□□□□ 0.88
SNX9-201ENST00000392185 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
SNX9-201ENST00000392185 FCHSD2O94868 740 aa20.53■□□□□ 0.88
SNX9-201ENST00000392185 NOB1Q9ULX3 412 aaKnown RBP20.53■□□□□ 0.88
SNX9-201ENST00000392185 SLFN5Q08AF3 891 aa20.52■□□□□ 0.88
SNX9-201ENST00000392185 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
SNX9-201ENST00000392185 ZNF530Q6P9A1 599 aaPredicted RBP20.52■□□□□ 0.88
SNX9-201ENST00000392185 CFAP44Q96MT7 982 aa20.52■□□□□ 0.88
SNX9-201ENST00000392185 WDR63Q8IWG1 891 aa20.52■□□□□ 0.88
SNX9-201ENST00000392185 MIS18AQ9NYP9 233 aa20.51■□□□□ 0.87
SNX9-201ENST00000392185 TEX14Q8IWB6 1497 aa20.51■□□□□ 0.87
SNX9-201ENST00000392185 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
SNX9-201ENST00000392185 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
SNX9-201ENST00000392185 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
SNX9-201ENST00000392185 PRDM11Q9NQV5 511 aa20.49■□□□□ 0.87
SNX9-201ENST00000392185 CFAP65Q6ZU64 1925 aaKnown RBP20.49■□□□□ 0.87
SNX9-201ENST00000392185 SLC4A2P04920 1241 aa20.49■□□□□ 0.87
SNX9-201ENST00000392185 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
SNX9-201ENST00000392185 USHBP1Q8N6Y0 703 aa20.49■□□□□ 0.87
SNX9-201ENST00000392185 ADGRL2O95490 1459 aa20.49■□□□□ 0.87
SNX9-201ENST00000392185 MCM10Q7L590 875 aa20.49■□□□□ 0.87
SNX9-201ENST00000392185 UHRF1BP1LA0JNW5 1464 aa20.48■□□□□ 0.87
SNX9-201ENST00000392185 NFE2L2Q16236 605 aa20.48■□□□□ 0.87
SNX9-201ENST00000392185 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
SNX9-201ENST00000392185 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
SNX9-201ENST00000392185 ACEP12821 1306 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 FYB1O15117 783 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 PDE3AQ14432 1141 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 HDGFL1Q5TGJ6 251 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 RIC3Q7Z5B4 369 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 NCKAP5LQ9HCH0 1330 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 MBD5Q9P267 1494 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 TOM1L2Q6ZVM7 507 aa20.46■□□□□ 0.87
SNX9-201ENST00000392185 DDX54Q8TDD1 881 aaKnown RBP20.46■□□□□ 0.87
SNX9-201ENST00000392185 ZRANB1Q9UGI0 708 aa20.45■□□□□ 0.86
SNX9-201ENST00000392185 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.45■□□□□ 0.861e-12■■■■□ 25.5
SNX9-201ENST00000392185 CARD14Q9BXL6 1004 aa20.45■□□□□ 0.86
SNX9-201ENST00000392185 AEBP2Q6ZN18 517 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms