RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 ANKRD13AQ8IZ07 590 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 DEPDC4Q8N2C3 294 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 SLAIN1Q8ND83 568 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 TSC1Q92574 1164 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 MS4A3Q96HJ5 214 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 EPAS1Q99814 870 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 TMEM121BQ9BXQ6 578 aaPredicted RBP2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 BACH2Q9BYV9 841 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 ANO2Q9NQ90 1003 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 ZMIZ1Q9ULJ6 1067 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 PCDHGC3Q9UN70 934 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 NOVA2Q9UNW9 492 aaKnown RBP2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 BOLA1Q9Y3E2 137 aa2.23□□□□□ -2.05
RNU1-78P-201ENST00000391248 TTLL13PA6NNM8 815 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 LGR5O75473 907 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 CD46P15529 392 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 ERCC5P28715 1186 aaPredicted RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 ZC3H6P61129 1189 aaKnown RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 GUCA2AQ02747 115 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 FAM69CQ0P6D2 419 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 ELOAQ14241 798 aaKnown RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 TSGA10IPQ3SY00 556 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 NPAS4Q8IUM7 802 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 TTC13Q8NBP0 860 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 FAM200AQ8TCP9 573 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 PTCD2Q8WV60 388 aaKnown RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 DHX38Q92620 1227 aaKnown RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 HLA-CQ95604 372 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 C8orf37Q96NL8 207 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 EYA1Q99502 592 aa2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 HIRIP3Q9BW71 556 aaPredicted RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 CDCA7Q9BWT1 371 aaPredicted RBP2.22□□□□□ -2.05
RNU1-78P-201ENST00000391248 TLDC2A0PJX2 215 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 C3orf80F5H4A9 247 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 SOCS7O14512 581 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 ABL1P00519 1130 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 SKIP12755 728 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 NCLP19338 710 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 FXR2P51116 673 aaKnown RBP eCLIP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 FOSBP53539 338 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 PRSS12P56730 875 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 SLFNL1Q499Z3 407 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 CRTC2Q53ET0 693 aaPredicted RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 PRPF38BQ5VTL8 546 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 B4GALNT3Q6L9W6 998 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 TYW1BQ6NUM6 668 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 NOL8Q76FK4 1167 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 PDCD7Q8N8D1 485 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 RBM46Q8TBY0 533 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZNF526Q8TF50 670 aaPredicted RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 UBXN4Q92575 508 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 SYMPKQ92797 1274 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 VTI1AQ96AJ9 217 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 PRIMPOLQ96LW4 560 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 DNAJC2Q99543 621 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 BMP2KQ9NSY1 1161 aaPredicted RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 FAM198AQ9UFP1 575 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 MKRN1Q9UHC7 482 aaKnown RBP2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 TRIM35Q9UPQ4 493 aa2.21□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZC3H4Q9UPT8 1303 aaKnown RBP2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 CFAP99D6REC4 459 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 G3V3G9 751 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 FDX1P10109 184 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 CD44P16070 742 aaKnown RBP2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 RASA1P20936 1047 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 ATP2B4P23634 1241 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 VAMP1P23763 118 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 GJA5P36382 358 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 EIF4G2P78344 907 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 HDLBPQ00341 1268 aaKnown RBP2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 PTK7Q13308 1070 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 ECM1Q16610 540 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 CCDC144BQ3MJ40 725 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 LDLRAD1Q5T700 205 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 LARP1Q6PKG0 1096 aaKnown RBP2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 FBXO33Q7Z6M2 555 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 TMEM87AQ8NBN3 555 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 GAS2L2Q8NHY3 880 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 PIK3R5Q8WYR1 880 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 CDCA7LQ96GN5 454 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 LNPKQ9C0E8 428 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZBTB3Q9H5J0 574 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 OCEL1Q9H607 264 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 RNF19AQ9NV58 838 aa2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU1-78P-201ENST00000391248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 LOC102724159A0A0B4J2E5 919 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 ZBTB7BO15156 539 aaPredicted RBP2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 PER1O15534 1290 aaPredicted RBP2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 PRMT3O60678 531 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 RECKO95980 971 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 MAPK1P28482 360 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 GTF2F1P35269 517 aaKnown RBP eCLIP2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 TIE1P35590 1138 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 SOX11P35716 441 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 KCNH2Q12809 1159 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 PWP2Q15269 919 aaKnown RBP2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 CAPN12Q6ZSI9 719 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 NUDT18Q6ZVK8 323 aa2.19□□□□□ -2.06
RNU1-78P-201ENST00000391248 SLF2Q8IX21 1173 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms