RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 GPR161Q8N6U8 529 aaKnown RBP2.76□□□□□ -1.97
TRAJ53-201ENST00000390485 EMILIN3Q9NT22 766 aa2.76□□□□□ -1.97
TRAJ53-201ENST00000390485 FCF1Q9Y324 198 aaKnown RBP2.76□□□□□ -1.97
TRAJ53-201ENST00000390485 NR1I2O75469 434 aa2.75□□□□□ -1.97
TRAJ53-201ENST00000390485 EN1Q05925 392 aaPredicted RBP2.75□□□□□ -1.97
TRAJ53-201ENST00000390485 TSR1Q2NL82 804 aaKnown RBP2.75□□□□□ -1.97
TRAJ53-201ENST00000390485 NCKAP5LQ9HCH0 1330 aa2.74□□□□□ -1.97
TRAJ53-201ENST00000390485 CAPN5O15484 640 aaPredicted RBP2.74□□□□□ -1.97
TRAJ53-201ENST00000390485 SLC4A3P48751 1232 aa2.74□□□□□ -1.97
TRAJ53-201ENST00000390485 CERKQ8TCT0 537 aa2.74□□□□□ -1.97
TRAJ53-201ENST00000390485 REPIN1Q9BWE0 567 aaKnown RBP2.74□□□□□ -1.97
TRAJ53-201ENST00000390485 YBX3P16989 372 aaKnown RBP eCLIP2.73□□□□□ -1.97
TRAJ53-201ENST00000390485 ZMYM1Q5SVZ6 1142 aa2.73□□□□□ -1.97
TRAJ53-201ENST00000390485 SPSB2Q99619 263 aa2.73□□□□□ -1.97
TRAJ53-201ENST00000390485 SOBPA7XYQ1 873 aa2.72□□□□□ -1.97
TRAJ53-201ENST00000390485 PHF20L1A8MW92 1017 aa2.72□□□□□ -1.97
TRAJ53-201ENST00000390485 PDE4AP27815 886 aa2.72□□□□□ -1.97
TRAJ53-201ENST00000390485 SCUBE3Q8IX30 993 aa2.72□□□□□ -1.97
TRAJ53-201ENST00000390485 COL25A1Q9BXS0 654 aaPredicted RBP2.72□□□□□ -1.97
TRAJ53-201ENST00000390485 RBM27Q9P2N5 1060 aaKnown RBP2.72□□□□□ -1.97
TRAJ53-201ENST00000390485 ZBTB24O43167 697 aaPredicted RBP2.71□□□□□ -1.98
TRAJ53-201ENST00000390485 MAP3K7O43318 606 aa2.71□□□□□ -1.98
TRAJ53-201ENST00000390485 TRIM32Q13049 653 aa2.71□□□□□ -1.98
TRAJ53-201ENST00000390485 KMT5BQ4FZB7 885 aa2.71□□□□□ -1.98
TRAJ53-201ENST00000390485 RNFT1Q5M7Z0 435 aa2.71□□□□□ -1.98
TRAJ53-201ENST00000390485 FZD5Q13467 585 aa2.7□□□□□ -1.98
TRAJ53-201ENST00000390485 TTC13Q8NBP0 860 aa2.7□□□□□ -1.98
TRAJ53-201ENST00000390485 CNTNAP5Q8WYK1 1306 aa2.69□□□□□ -1.98
TRAJ53-201ENST00000390485 MFSD10Q14728 455 aa2.69□□□□□ -1.98
TRAJ53-201ENST00000390485 ARTNQ5T4W7 220 aa2.69□□□□□ -1.98
TRAJ53-201ENST00000390485 BEND7Q8N7W2 519 aaPredicted RBP2.69□□□□□ -1.98
TRAJ53-201ENST00000390485 NANOS1Q8WY41 292 aaKnown RBP2.69□□□□□ -1.98
TRAJ53-201ENST00000390485 KRBA1A5PL33 1030 aa2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 ALDH1A1P00352 501 aa2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 FOXD4L6Q3SYB3 417 aaPredicted RBP2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 MRPL14Q6P1L8 145 aaKnown RBP2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 LYPD4Q6UWN0 246 aa2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 FOXD4L3Q6VB84 417 aaPredicted RBP2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 DDX12PQ92771 950 aa2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 DDX27Q96GQ7 796 aaKnown RBP2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 ZFP64Q9NPA5 681 aa2.68□□□□□ -1.98
TRAJ53-201ENST00000390485 SCARF1Q14162 830 aa2.67□□□□□ -1.98
TRAJ53-201ENST00000390485 RC3H1Q5TC82 1133 aaKnown RBP2.67□□□□□ -1.98
TRAJ53-201ENST00000390485 FAM160A2Q8N612 972 aaPredicted RBP2.67□□□□□ -1.98
TRAJ53-201ENST00000390485 PURBQ96QR8 312 aaKnown RBP2.67□□□□□ -1.98
TRAJ53-201ENST00000390485 EYA1Q99502 592 aa2.67□□□□□ -1.98
TRAJ53-201ENST00000390485 SCO2A0A1W2PP80 73 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 SIAH2O43255 324 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 MAN1A2O60476 641 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 CFHP08603 1231 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 TXKP42681 527 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 NBR1Q14596 966 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 THAP11Q96EK4 314 aa2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 LARP6Q9BRS8 491 aaKnown RBP2.66□□□□□ -1.98
TRAJ53-201ENST00000390485 CELA2BP08218 269 aaPredicted RBP2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 WNT7BP56706 349 aa2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 MAP3K10Q02779 954 aa2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 NBPF11Q86T75 865 aa2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 FMNL2Q96PY5 1086 aa2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 SEMA6BQ9H3T3 888 aa2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 ENAMQ9NRM1 1142 aa2.65□□□□□ -1.99
TRAJ53-201ENST00000390485 ADAMTS2O95450 1211 aa2.64□□□□□ -1.99
TRAJ53-201ENST00000390485 SKOR1P84550 965 aa2.64□□□□□ -1.99
TRAJ53-201ENST00000390485 PODNQ7Z5L7 613 aa2.64□□□□□ -1.99
TRAJ53-201ENST00000390485 ALYREFQ86V81 257 aaKnown RBP2.64□□□□□ -1.99
TRAJ53-201ENST00000390485 PRDM9Q9NQV7 894 aa2.63□□□□□ -1.99
TRAJ53-201ENST00000390485 SLC10A3P09131 477 aa2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 PRIM1P49642 420 aaKnown RBP2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 SRSF11Q05519 484 aaKnown RBP2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 PUS10Q3MIT2 529 aaKnown RBP2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 MCTP1Q6DN14 999 aa2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 TMEM134Q9H6X4 195 aa2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 WASF2Q9Y6W5 498 aa2.62□□□□□ -1.99
TRAJ53-201ENST00000390485 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
TRAJ53-201ENST00000390485 SALL2Q9Y467 1007 aaPredicted RBP2.61□□□□□ -1.99
TRAJ53-201ENST00000390485 DPYSL4O14531 572 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 PAX4O43316 350 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 TIMP2P16035 220 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 DNAJB2P25686 324 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 CAMK2BQ13554 666 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 MSS51Q4VC12 460 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 PADI6Q6TGC4 694 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 DNMT3LQ9UJW3 386 aa2.6□□□□□ -1.99
TRAJ53-201ENST00000390485 FMNL1O95466 1100 aaPredicted RBP2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 COL8A1P27658 744 aa2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 MMP16P51512 607 aa2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 MORN1Q5T089 497 aa2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 LCE5AQ5TCM9 118 aa2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 BRICD5Q6PL45 260 aa2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 KLF16Q9BXK1 252 aaPredicted RBP2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 CDHR5Q9HBB8 845 aa2.59□□□□□ -1.99
TRAJ53-201ENST00000390485 SOS2Q07890 1332 aaPredicted RBP2.59□□□□□ -2
TRAJ53-201ENST00000390485 COL17A1Q9UMD9 1497 aaPredicted RBP2.58□□□□□ -2
TRAJ53-201ENST00000390485 C1QTNF9BB2RNN3 333 aa2.58□□□□□ -2
TRAJ53-201ENST00000390485 PTSQ03393 145 aa2.58□□□□□ -2
TRAJ53-201ENST00000390485 VWA5B2Q8N398 1253 aa2.58□□□□□ -2
TRAJ53-201ENST00000390485 CCER1Q8TC90 406 aaPredicted RBP2.58□□□□□ -2
TRAJ53-201ENST00000390485 NPDC1Q9NQX5 325 aaPredicted RBP2.58□□□□□ -2
TRAJ53-201ENST00000390485 SV2AQ7L0J3 742 aa2.57□□□□□ -2
TRAJ53-201ENST00000390485 CD163Q86VB7 1156 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms