RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CAPNS1P04632 268 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CELA2BP08218 269 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NR3C2P08235 984 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CFHP08603 1231 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP1-4P0C5Y4 121 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ATXN8OSP0DMR3 200 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SLURP2P0DP57 97 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 VSIG8P0DPA2 414 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PYGBP11216 843 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NID1P14543 1247 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 HNRNPLP14866 589 aaKnown RBP eCLIP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CD44P16070 742 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SELPP16109 830 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SMPD1P17405 629 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SPINK2P20155 84 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FECHP22830 423 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FBLN1P23142 703 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 THBS2P35442 1172 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRT9P35527 623 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 GMPRP36959 345 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 GRM5P41594 1212 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MLLT3P42568 568 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CHRNA4P43681 627 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 BAG6P46379 1132 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 GCGRP47871 477 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MMP16P51512 607 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CLCN6P51797 869 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PTTG1IPP53801 180 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP10-1P60331 282 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP10-11P60412 298 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SNRPNP63162 240 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SH3BP2P78314 561 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SRPK2P78362 688 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 JAG1P78504 1218 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 LSM11P83369 360 aaKnown RBP eCLIP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXK1P85037 733 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR20EP86478 221 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR20CP86479 221 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR20DP86480 221 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR20BP86481 221 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PRR20AP86496 221 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CTBSQ01459 385 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MAP3K10Q02779 954 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RASSF7Q02833 373 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PLAURQ03405 335 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 COL10A1Q03692 680 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RING1Q06587 406 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CYP4F3Q08477 520 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MESP2Q0VG99 397 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PKD2Q13563 968 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 DSG2Q14126 1118 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 GRIN2CQ14957 1233 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CDSNQ15517 529 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CSRP2Q16527 193 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ECM1Q16610 540 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RSPO4Q2I0M5 234 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TSR1Q2NL82 804 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PROX2Q3B8N5 592 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 KRTAP6-3Q3LI67 103 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PLA2G4EQ3MJ16 856 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 TSGA10IPQ3SY00 556 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FBLN7Q53RD9 439 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 NOM1Q5C9Z4 860 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ARSIQ5FYB1 569 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 XKR4Q5GH76 650 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FAM26DQ5JW98 314 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 COLEC12Q5KU26 742 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 VARS2Q5ST30 1063 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MORN1Q5T089 497 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 C6orf132Q5T0Z8 1188 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 IER5LQ5T953 404 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FNDC7Q5VTL7 733 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 LRCH2Q5VUJ6 765 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 FOXD4L5Q5VV16 416 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PEAR1Q5VY43 1037 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SCARA3Q6AZY7 606 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF787Q6DD87 383 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 BLOC1S3Q6QNY0 202 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 POTEAQ6S8J7 498 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PLPPR3Q6T4P5 718 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PCSK4Q6UW60 755 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 LYPD8Q6UX82 237 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SEZ6L2Q6UXD5 910 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SPOCD1Q6ZMY3 1216 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 MAMSTRQ6ZN01 415 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 C20orf204Q6ZNR8 217 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 Q6ZS46 218 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ANKRD13DQ6ZTN6 518 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 Q6ZVU0 165 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CBLL1Q75N03 491 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RIC3Q7Z5B4 369 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SH3RF1Q7Z6J0 888 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 PABPN1Q86U42 306 aaKnown RBP eCLIP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF598Q86UK7 904 aaKnown RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 CD163Q86VB7 1156 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 AMIGO3Q86WK7 504 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 ZNF575Q86XF7 245 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 IFNLR1Q8IU57 520 aaPredicted RBP-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 RNF135Q8IUD6 432 aa-0.01□□□□□ -2.41
TRAJ54-201ENST00000390484 SCUBE3Q8IX30 993 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms