RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 API5Q9BZZ5 524 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-201ENST00000389328 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-201ENST00000389328 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
TRAPPC9-201ENST00000389328 K7ELQ4 463 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-201ENST00000389328 CAMSAP2Q08AD1 1489 aa16.12■□□□□ 0.17
TRAPPC9-201ENST00000389328 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
TRAPPC9-201ENST00000389328 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
TRAPPC9-201ENST00000389328 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
TRAPPC9-201ENST00000389328 NUTM2FA1L443 756 aa16.1■□□□□ 0.17
TRAPPC9-201ENST00000389328 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
TRAPPC9-201ENST00000389328 CHMP3Q9Y3E7 222 aa16.1■□□□□ 0.17
TRAPPC9-201ENST00000389328 PCDHB15Q9Y5E8 787 aa16.1■□□□□ 0.17
TRAPPC9-201ENST00000389328 NRDCO43847 1150 aa16.09■□□□□ 0.17
TRAPPC9-201ENST00000389328 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
TRAPPC9-201ENST00000389328 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC9-201ENST00000389328 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
TRAPPC9-201ENST00000389328 TNPO1Q92973 898 aaKnown RBP16.08■□□□□ 0.17
TRAPPC9-201ENST00000389328 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.16
TRAPPC9-201ENST00000389328 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-201ENST00000389328 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-201ENST00000389328 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC9-201ENST00000389328 NEK4P51957 841 aa16.07■□□□□ 0.16
TRAPPC9-201ENST00000389328 RABEP1Q15276 862 aa16.07■□□□□ 0.16
TRAPPC9-201ENST00000389328 SSH1Q8WYL5 1049 aa16.07■□□□□ 0.16
TRAPPC9-201ENST00000389328 GNAI1P63096 354 aa16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 PRKAR2BP31323 418 aa16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 RRAGDQ9NQL2 400 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 CCDC39Q9UFE4 941 aa16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC9-201ENST00000389328 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
TRAPPC9-201ENST00000389328 GCC1Q96CN9 775 aa16.05■□□□□ 0.16
TRAPPC9-201ENST00000389328 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
TRAPPC9-201ENST00000389328 SSFA2P28290 1259 aa16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 LMOD2Q6P5Q4 547 aa16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 BCL11BQ9C0K0 894 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 MAP7D2Q96T17 732 aa16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 KDM2BQ8NHM5 1336 aa16.04■□□□□ 0.16
TRAPPC9-201ENST00000389328 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 ARHGAP5Q13017 1502 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 CFAP43Q8NDM7 1665 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 CLCN1P35523 988 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 CUL7Q14999 1698 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 PLB1Q6P1J6 1458 aa16.03■□□□□ 0.16
TRAPPC9-201ENST00000389328 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
TRAPPC9-201ENST00000389328 ZNF592Q92610 1267 aa16.02■□□□□ 0.16
TRAPPC9-201ENST00000389328 IQGAP2Q13576 1575 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 UQCRHLA0A096LP55 91 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 UQCRHP07919 91 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 TESK2Q96S53 571 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 ZMYND15Q9H091 742 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 ATP6V1DQ9Y5K8 247 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 TRIM27P14373 513 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 COG3Q96JB2 828 aa16.02■□□□□ 0.15
TRAPPC9-201ENST00000389328 TMPOP42166 694 aaKnown RBP16.01■□□□□ 0.15
TRAPPC9-201ENST00000389328 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC9-201ENST00000389328 SCAPERQ9BY12 1400 aa16.01■□□□□ 0.15
TRAPPC9-201ENST00000389328 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
TRAPPC9-201ENST00000389328 CT47B1P0C2W7 299 aaPredicted RBP16■□□□□ 0.15
TRAPPC9-201ENST00000389328 RLBP1P12271 317 aa16■□□□□ 0.15
TRAPPC9-201ENST00000389328 MBD3O95983 291 aa16■□□□□ 0.15
TRAPPC9-201ENST00000389328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
TRAPPC9-201ENST00000389328 VPS37CA5D8V6 355 aaPredicted RBP16■□□□□ 0.15
TRAPPC9-201ENST00000389328 TEX14Q8IWB6 1497 aa15.99■□□□□ 0.15
TRAPPC9-201ENST00000389328 XPCQ01831 940 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC9-201ENST00000389328 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
TRAPPC9-201ENST00000389328 LTV1Q96GA3 475 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC9-201ENST00000389328 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
TRAPPC9-201ENST00000389328 TSPY26PQ9H489 355 aa15.99■□□□□ 0.15
TRAPPC9-201ENST00000389328 ZNF771Q7L3S4 317 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC9-201ENST00000389328 SYCE3A1L190 88 aa15.98■□□□□ 0.15
TRAPPC9-201ENST00000389328 HSP90B1P14625 803 aaKnown RBP15.98■□□□□ 0.15
TRAPPC9-201ENST00000389328 CCDC27Q2M243 656 aa15.98■□□□□ 0.15
TRAPPC9-201ENST00000389328 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC9-201ENST00000389328 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
TRAPPC9-201ENST00000389328 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
TRAPPC9-201ENST00000389328 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
TRAPPC9-201ENST00000389328 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
TRAPPC9-201ENST00000389328 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
TRAPPC9-201ENST00000389328 KIAA0586Q9BVV6 1533 aa15.96■□□□□ 0.15
TRAPPC9-201ENST00000389328 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
TRAPPC9-201ENST00000389328 CWC22Q9HCG8 908 aaKnown RBP15.96■□□□□ 0.15
TRAPPC9-201ENST00000389328 DIAPH3Q9NSV4 1193 aa15.96■□□□□ 0.15
TRAPPC9-201ENST00000389328 AMPHP49418 695 aa15.96■□□□□ 0.14
TRAPPC9-201ENST00000389328 GPATCH3Q96I76 525 aa15.95■□□□□ 0.14
TRAPPC9-201ENST00000389328 DNAJC5BQ9UF47 199 aa15.95■□□□□ 0.14
TRAPPC9-201ENST00000389328 A0A0U1RQG5 324 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 FIBPO43427 364 aa15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 IFT57Q9NWB7 429 aa15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
TRAPPC9-201ENST00000389328 PRAG1Q86YV5 1406 aa15.93■□□□□ 0.14
TRAPPC9-201ENST00000389328 BECN2A8MW95 431 aa15.93■□□□□ 0.14
TRAPPC9-201ENST00000389328 PZPP20742 1482 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms