RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 MST1RQ04912 1400 aa6.88□□□□□ -1.31
C9orf72-203ENST00000380003 NGLY1Q96IV0 654 aa6.88□□□□□ -1.31
C9orf72-203ENST00000380003 PRAM1Q96QH2 718 aa6.88□□□□□ -1.31
C9orf72-203ENST00000380003 KIF1BO60333 1816 aa6.87□□□□□ -1.31
C9orf72-203ENST00000380003 AFF2P51816 1311 aa6.87□□□□□ -1.31
C9orf72-203ENST00000380003 SETD1AO15047 1707 aaKnown RBP6.87□□□□□ -1.31
C9orf72-203ENST00000380003 SETBP1Q9Y6X0 1596 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 LRRC59Q96AG4 307 aaKnown RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 MINK1Q8N4C8 1332 aaPredicted RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 PIK3R4Q99570 1358 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 SPATA31E1Q6ZUB1 1445 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 ASXL1Q8IXJ9 1541 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 NALCNQ8IZF0 1738 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 NEUROD1Q13562 356 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 ADGRL3Q9HAR2 1447 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 C1orf167Q5SNV9 1468 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 SIN3AQ96ST3 1273 aa6.86□□□□□ -1.31
C9orf72-203ENST00000380003 QTRT2Q9H974 415 aaKnown RBP6.86□□□□□ -1.31
C9orf72-203ENST00000380003 XRN1Q8IZH2 1706 aaKnown RBP6.85□□□□□ -1.31
C9orf72-203ENST00000380003 NUTM2GQ5VZR2 741 aa6.85□□□□□ -1.31
C9orf72-203ENST00000380003 POGKQ9P215 609 aa6.85□□□□□ -1.31
C9orf72-203ENST00000380003 RPGRIP1LQ68CZ1 1315 aa6.84□□□□□ -1.31
C9orf72-203ENST00000380003 RXRBP28702 533 aa6.84□□□□□ -1.31
C9orf72-203ENST00000380003 NBPF1Q3BBV0 1214 aa6.84□□□□□ -1.31
C9orf72-203ENST00000380003 DIP2AQ14689 1571 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 C14orf93Q9H972 538 aaKnown RBP6.83□□□□□ -1.32
C9orf72-203ENST00000380003 USP21Q9UK80 565 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 PNPLA6Q8IY17 1366 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 SPATA31A6Q5VVP1 1343 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 PAK3O75914 559 aaPredicted RBP6.83□□□□□ -1.32
C9orf72-203ENST00000380003 YTHDC2Q9H6S0 1430 aaKnown RBP6.83□□□□□ -1.32
C9orf72-203ENST00000380003 PPLO60437 1756 aa6.83□□□□□ -1.32
C9orf72-203ENST00000380003 HAP1P54257 671 aaPredicted RBP6.82□□□□□ -1.32
C9orf72-203ENST00000380003 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 PIK3C2GO75747 1445 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 ZNF772Q68DY9 489 aaPredicted RBP6.82□□□□□ -1.32
C9orf72-203ENST00000380003 SOS2Q07890 1332 aaPredicted RBP6.82□□□□□ -1.32
C9orf72-203ENST00000380003 PSME1Q06323 249 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 KRT28Q7Z3Y7 464 aa6.82□□□□□ -1.32
C9orf72-203ENST00000380003 NCOA3Q9Y6Q9 1424 aa6.81□□□□□ -1.32
C9orf72-203ENST00000380003 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
C9orf72-203ENST00000380003 PTCH1Q13635 1447 aa6.81□□□□□ -1.32
C9orf72-203ENST00000380003 LRPPRCP42704 1394 aaKnown RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 A0A0G2JS52 829 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 MYT1Q01538 1121 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 PHF8Q9UPP1 1060 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 DCCP43146 1447 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 NPHP3Q7Z494 1330 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 PRR36Q9H6K5 1346 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 DHX57Q6P158 1386 aaKnown RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 AHDC1Q5TGY3 1603 aaPredicted RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 USP35Q9P2H5 1018 aa6.8□□□□□ -1.32
C9orf72-203ENST00000380003 RGPD8O14715 1765 aaPredicted RBP6.8□□□□□ -1.32
C9orf72-203ENST00000380003 ABCC11Q96J66 1382 aa6.79□□□□□ -1.32
C9orf72-203ENST00000380003 ZBTB7CA1YPR0 619 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 SOX12O15370 315 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 CHRNA2Q15822 529 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 L3MBTL2Q969R5 705 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 NGDNQ8NEJ9 315 aaKnown RBP6.78□□□□□ -1.32
C9orf72-203ENST00000380003 CABP2Q9NPB3 220 aa6.78□□□□□ -1.32
C9orf72-203ENST00000380003 RGS12O14924 1447 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 FAM83GA6ND36 823 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 ZC3H6P61129 1189 aaKnown RBP6.77□□□□□ -1.33
C9orf72-203ENST00000380003 RBM6P78332 1123 aaKnown RBP6.77□□□□□ -1.33
C9orf72-203ENST00000380003 SPATA31A3Q5VYP0 1347 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 NHSL1Q5SYE7 1610 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 PXDNQ92626 1479 aa6.77□□□□□ -1.33
C9orf72-203ENST00000380003 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 WASLO00401 505 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 SRPK2P78362 688 aaKnown RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 RNF216Q9NWF9 866 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 BCL9LQ86UU0 1499 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 SHPRHQ149N8 1683 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 IFT172Q9UG01 1749 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 DEFB132Q7Z7B7 95 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 FNBP4Q8N3X1 1017 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 NUDT16Q96DE0 195 aaKnown RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 STRN4Q9NRL3 753 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 BTG4Q9NY30 223 aa6.76□□□□□ -1.33
C9orf72-203ENST00000380003 TRPC5Q9UL62 973 aaPredicted RBP6.76□□□□□ -1.33
C9orf72-203ENST00000380003 FAM98CQ17RN3 349 aaKnown RBP6.75□□□□□ -1.33
C9orf72-203ENST00000380003 GJD4Q96KN9 370 aaPredicted RBP6.75□□□□□ -1.33
C9orf72-203ENST00000380003 TECPR2O15040 1411 aa6.75□□□□□ -1.33
C9orf72-203ENST00000380003 ADGRB1O14514 1584 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 CDC42BPGQ6DT37 1551 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 UNC5CLQ8IV45 518 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 NRXN1Q9ULB1 1477 aa6.74□□□□□ -1.33
C9orf72-203ENST00000380003 ACIN1Q9UKV3 1341 aaKnown RBP6.73□□□□□ -1.33
C9orf72-203ENST00000380003 NBPF8Q3BBV2 869 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 MYOM2P54296 1465 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 ACEP12821 1306 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 POTEHQ6S545 545 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 ABTB2Q8N961 1025 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 CABP1Q9NZU7 370 aa6.73□□□□□ -1.33
C9orf72-203ENST00000380003 CNKSR2Q8WXI2 1034 aa6.72□□□□□ -1.33
C9orf72-203ENST00000380003 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms