RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 KIF13AQ9H1H9 1805 aa13.72□□□□□ -0.21
ITSN1-201ENST00000379960 DHX37Q8IY37 1157 aaKnown RBP13.72□□□□□ -0.21
ITSN1-201ENST00000379960 KDM2BQ8NHM5 1336 aa13.71□□□□□ -0.21
ITSN1-201ENST00000379960 MSNP26038 577 aaKnown RBP13.71□□□□□ -0.21
ITSN1-201ENST00000379960 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
ITSN1-201ENST00000379960 CEP152O94986 1710 aa13.71□□□□□ -0.21
ITSN1-201ENST00000379960 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.22
ITSN1-201ENST00000379960 MLECQ14165 292 aa13.71□□□□□ -0.22
ITSN1-201ENST00000379960 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.22
ITSN1-201ENST00000379960 PPRC1Q5VV67 1664 aaKnown RBP13.7□□□□□ -0.22
ITSN1-201ENST00000379960 GLI2P10070 1586 aa13.7□□□□□ -0.22
ITSN1-201ENST00000379960 CHGAP10645 457 aaKnown RBP13.7□□□□□ -0.22
ITSN1-201ENST00000379960 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
ITSN1-201ENST00000379960 USP19O94966 1318 aa13.7□□□□□ -0.22
ITSN1-201ENST00000379960 FRMPD1Q5SYB0 1578 aa13.7□□□□□ -0.22
ITSN1-201ENST00000379960 MLH3Q9UHC1 1453 aa13.7□□□□□ -0.22
ITSN1-201ENST00000379960 KIF20AO95235 890 aa13.7□□□□□ -0.22
ITSN1-201ENST00000379960 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
ITSN1-201ENST00000379960 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
ITSN1-201ENST00000379960 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
ITSN1-201ENST00000379960 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
ITSN1-201ENST00000379960 UGGT1Q9NYU2 1555 aa13.69□□□□□ -0.22
ITSN1-201ENST00000379960 MROH1Q8NDA8 1641 aa13.69□□□□□ -0.22
ITSN1-201ENST00000379960 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
ITSN1-201ENST00000379960 ATP10AO60312 1499 aa13.67□□□□□ -0.22
ITSN1-201ENST00000379960 C20orf194Q5TEA3 1177 aa13.67□□□□□ -0.22
ITSN1-201ENST00000379960 GAS2L3Q86XJ1 694 aa13.67□□□□□ -0.22
ITSN1-201ENST00000379960 DIP2CQ9Y2E4 1556 aa13.67□□□□□ -0.22
ITSN1-201ENST00000379960 CARD11Q9BXL7 1154 aa13.67□□□□□ -0.22
ITSN1-201ENST00000379960 SEC24BO95487 1268 aa13.66□□□□□ -0.22
ITSN1-201ENST00000379960 CBX1P83916 185 aa13.66□□□□□ -0.22
ITSN1-201ENST00000379960 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
ITSN1-201ENST00000379960 SECISBP2LQ93073 1101 aaKnown RBP13.66□□□□□ -0.22
ITSN1-201ENST00000379960 GTPBP4Q9BZE4 634 aaKnown RBP13.66□□□□□ -0.22
ITSN1-201ENST00000379960 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
ITSN1-201ENST00000379960 CDCA7LQ96GN5 454 aa13.66□□□□□ -0.22
ITSN1-201ENST00000379960 COL17A1Q9UMD9 1497 aaPredicted RBP13.66□□□□□ -0.22
ITSN1-201ENST00000379960 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
ITSN1-201ENST00000379960 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-201ENST00000379960 EIF2AK4Q9P2K8 1649 aaKnown RBP13.65□□□□□ -0.22
ITSN1-201ENST00000379960 TET3O43151 1660 aa13.65□□□□□ -0.22
ITSN1-201ENST00000379960 SPHKAPQ2M3C7 1700 aa13.65□□□□□ -0.22
ITSN1-201ENST00000379960 PRDM15P57071 1507 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-201ENST00000379960 E9PSI1 815 aa13.64□□□□□ -0.23
ITSN1-201ENST00000379960 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
ITSN1-201ENST00000379960 CGNQ9P2M7 1197 aaKnown RBP13.64□□□□□ -0.23
ITSN1-201ENST00000379960 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
ITSN1-201ENST00000379960 XPCQ01831 940 aaPredicted RBP13.64□□□□□ -0.23
ITSN1-201ENST00000379960 CLTCL1P53675 1640 aa13.63□□□□□ -0.23
ITSN1-201ENST00000379960 BRD2P25440 801 aaKnown RBP13.63□□□□□ -0.23
ITSN1-201ENST00000379960 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-201ENST00000379960 USP47Q96K76 1375 aa13.63□□□□□ -0.23
ITSN1-201ENST00000379960 CCDC173Q0VFZ6 552 aa13.63□□□□□ -0.23
ITSN1-201ENST00000379960 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
ITSN1-201ENST00000379960 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
ITSN1-201ENST00000379960 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
ITSN1-201ENST00000379960 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
ITSN1-201ENST00000379960 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
ITSN1-201ENST00000379960 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
ITSN1-201ENST00000379960 NPATQ14207 1427 aa13.6□□□□□ -0.23
ITSN1-201ENST00000379960 EFCAB6Q5THR3 1501 aa13.6□□□□□ -0.23
ITSN1-201ENST00000379960 TRPM2O94759 1503 aa13.6□□□□□ -0.23
ITSN1-201ENST00000379960 IGSF3O75054 1194 aa13.59□□□□□ -0.23
ITSN1-201ENST00000379960 RNF17Q9BXT8 1623 aaKnown RBP13.59□□□□□ -0.23
ITSN1-201ENST00000379960 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.23
ITSN1-201ENST00000379960 NASPP49321 788 aaPredicted RBP13.58□□□□□ -0.24
ITSN1-201ENST00000379960 FBXO31Q5XUX0 539 aaPredicted RBP13.58□□□□□ -0.24
ITSN1-201ENST00000379960 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
ITSN1-201ENST00000379960 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
ITSN1-201ENST00000379960 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 CERS3Q8IU89 383 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 ABCC3O15438 1527 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 SIGLEC1Q9BZZ2 1709 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 PTPRTO14522 1441 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 CHMP5Q9NZZ3 219 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
ITSN1-201ENST00000379960 UHRF1BP1Q6BDS2 1440 aa13.57□□□□□ -0.24
ITSN1-201ENST00000379960 IRX3P78415 501 aaPredicted RBP13.56□□□□□ -0.24
ITSN1-201ENST00000379960 PDE3BQ13370 1112 aa13.56□□□□□ -0.24
ITSN1-201ENST00000379960 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
ITSN1-201ENST00000379960 JARID2Q92833 1246 aaPredicted RBP13.56□□□□□ -0.24
ITSN1-201ENST00000379960 BCORL1Q5H9F3 1711 aa13.55□□□□□ -0.24
ITSN1-201ENST00000379960 CHRM1P11229 460 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-201ENST00000379960 CAMSAP1Q5T5Y3 1602 aa13.55□□□□□ -0.24
ITSN1-201ENST00000379960 ATP2B3Q16720 1220 aa13.55□□□□□ -0.24
ITSN1-201ENST00000379960 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
ITSN1-201ENST00000379960 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
ITSN1-201ENST00000379960 KIF1BO60333 1816 aa13.55□□□□□ -0.24
ITSN1-201ENST00000379960 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 TRPM1Q7Z4N2 1603 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 RGS22Q8NE09 1264 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 TSC1Q92574 1164 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 PANK3Q9H999 370 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
ITSN1-201ENST00000379960 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
ITSN1-201ENST00000379960 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
ITSN1-201ENST00000379960 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
ITSN1-201ENST00000379960 CFAP70Q5T0N1 1121 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 278.4 ms