RNA–Protein interactions for RNA: ENST00000377399.2

SPSB1-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-203ENST00000377399 POGKQ9P215 609 aa26.95■■□□□ 1.9
SPSB1-203ENST00000377399 TMEM94Q12767 1356 aa26.95■■□□□ 1.9
SPSB1-203ENST00000377399 FAM135BQ49AJ0 1406 aa26.94■■□□□ 1.9
SPSB1-203ENST00000377399 PROSER2Q86WR7 435 aaPredicted RBP26.94■■□□□ 1.9
SPSB1-203ENST00000377399 ST20-MTHFSA0A0A6YYL1 179 aa26.93■■□□□ 1.9
SPSB1-203ENST00000377399 PRAM1Q96QH2 718 aa26.93■■□□□ 1.9
SPSB1-203ENST00000377399 NKTRP30414 1462 aaKnown RBP26.93■■□□□ 1.9
SPSB1-203ENST00000377399 QRICH2Q9H0J4 1663 aa26.92■■□□□ 1.9
SPSB1-203ENST00000377399 ROBO2Q9HCK4 1378 aa26.92■■□□□ 1.9
SPSB1-203ENST00000377399 SIRT1Q96EB6 747 aa26.91■■□□□ 1.9
SPSB1-203ENST00000377399 HIRIP3Q9BW71 556 aaPredicted RBP26.89■■□□□ 1.9
SPSB1-203ENST00000377399 SAFB2Q14151 953 aaKnown RBP eCLIP26.88■■□□□ 1.89
SPSB1-203ENST00000377399 PLEKHH1Q9ULM0 1364 aa26.86■■□□□ 1.89
SPSB1-203ENST00000377399 WAPLQ7Z5K2 1190 aa26.86■■□□□ 1.89
SPSB1-203ENST00000377399 SBNO2Q9Y2G9 1366 aa26.85■■□□□ 1.89
SPSB1-203ENST00000377399 SLC24A1O60721 1099 aa26.84■■□□□ 1.89
SPSB1-203ENST00000377399 RBM33Q96EV2 1170 aaKnown RBP26.82■■□□□ 1.88
SPSB1-203ENST00000377399 MSH6P52701 1360 aa26.82■■□□□ 1.88
SPSB1-203ENST00000377399 TESK2Q96S53 571 aa26.81■■□□□ 1.88
SPSB1-203ENST00000377399 MINK1Q8N4C8 1332 aaPredicted RBP26.81■■□□□ 1.88
SPSB1-203ENST00000377399 TMF1P82094 1093 aa26.8■■□□□ 1.88
SPSB1-203ENST00000377399 C14orf37Q86TY3 774 aa26.78■■□□□ 1.88
SPSB1-203ENST00000377399 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.77■■□□□ 1.88
SPSB1-203ENST00000377399 ROBO1Q9Y6N7 1651 aa26.77■■□□□ 1.88
SPSB1-203ENST00000377399 ADGRB2O60241 1585 aa26.77■■□□□ 1.88
SPSB1-203ENST00000377399 ZNF316A6NFI3 1004 aaPredicted RBP26.77■■□□□ 1.88
SPSB1-203ENST00000377399 EVC2Q86UK5 1308 aa26.76■■□□□ 1.87
SPSB1-203ENST00000377399 SLAIN2Q9P270 581 aa26.76■■□□□ 1.87
SPSB1-203ENST00000377399 ADGRL3Q9HAR2 1447 aa26.75■■□□□ 1.87
SPSB1-203ENST00000377399 NALCNQ8IZF0 1738 aa26.75■■□□□ 1.87
SPSB1-203ENST00000377399 CDCA8Q53HL2 280 aa26.74■■□□□ 1.87
SPSB1-203ENST00000377399 RGS17Q9UGC6 210 aaPredicted RBP26.74■■□□□ 1.87
SPSB1-203ENST00000377399 TULP4Q9NRJ4 1543 aa26.74■■□□□ 1.87
SPSB1-203ENST00000377399 NCOA3Q9Y6Q9 1424 aa26.73■■□□□ 1.87
SPSB1-203ENST00000377399 CDC42BPGQ6DT37 1551 aa26.7■■□□□ 1.86
SPSB1-203ENST00000377399 POLR3GLQ9BT43 218 aa26.69■■□□□ 1.86
SPSB1-203ENST00000377399 WASLO00401 505 aaPredicted RBP26.68■■□□□ 1.86
SPSB1-203ENST00000377399 SRPK2P78362 688 aaKnown RBP26.68■■□□□ 1.86
SPSB1-203ENST00000377399 KIF7Q2M1P5 1343 aa26.66■■□□□ 1.86
SPSB1-203ENST00000377399 CDK19Q9BWU1 502 aa26.66■■□□□ 1.86
SPSB1-203ENST00000377399 CCDC7Q96M83 1385 aa26.66■■□□□ 1.86
SPSB1-203ENST00000377399 C11orf95C9JLR9 678 aaPredicted RBP26.64■■□□□ 1.86
SPSB1-203ENST00000377399 C19orf44Q9H6X5 657 aa26.64■■□□□ 1.86
SPSB1-203ENST00000377399 DCCP43146 1447 aa26.64■■□□□ 1.85
SPSB1-203ENST00000377399 ATAD2Q6PL18 1390 aa26.63■■□□□ 1.85
SPSB1-203ENST00000377399 FMN2Q9NZ56 1722 aa26.63■■□□□ 1.85
SPSB1-203ENST00000377399 CABP2Q9NPB3 220 aa26.63■■□□□ 1.85
SPSB1-203ENST00000377399 WASHC2AQ641Q2 1341 aa26.63■■□□□ 1.85
SPSB1-203ENST00000377399 JCADQ9P266 1359 aa26.62■■□□□ 1.85
SPSB1-203ENST00000377399 CADPS2Q86UW7 1296 aa26.62■■□□□ 1.85
SPSB1-203ENST00000377399 PUS7Q96PZ0 661 aaKnown RBP26.62■■□□□ 1.85
SPSB1-203ENST00000377399 PHLPP1O60346 1717 aa26.62■■□□□ 1.85
SPSB1-203ENST00000377399 ATF3P18847 181 aa26.6■■□□□ 1.85
SPSB1-203ENST00000377399 POTEAQ6S8J7 498 aa26.58■■□□□ 1.85
SPSB1-203ENST00000377399 ANKARQ7Z5J8 1434 aa26.57■■□□□ 1.84
SPSB1-203ENST00000377399 ATP7BP35670 1465 aa26.57■■□□□ 1.84
SPSB1-203ENST00000377399 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
SPSB1-203ENST00000377399 NUTM2FA1L443 756 aa26.55■■□□□ 1.84
SPSB1-203ENST00000377399 NUDT16Q96DE0 195 aaKnown RBP26.55■■□□□ 1.84
SPSB1-203ENST00000377399 NINLQ9Y2I6 1382 aa26.55■■□□□ 1.84
SPSB1-203ENST00000377399 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
SPSB1-203ENST00000377399 USP32Q8NFA0 1604 aa26.53■■□□□ 1.84
SPSB1-203ENST00000377399 MYOM1P52179 1685 aa26.53■■□□□ 1.84
SPSB1-203ENST00000377399 COL16A1Q07092 1604 aaPredicted RBP26.52■■□□□ 1.84
SPSB1-203ENST00000377399 TOPAZ1Q8N9V7 1692 aa26.52■■□□□ 1.84
SPSB1-203ENST00000377399 PRR36Q9H6K5 1346 aa26.52■■□□□ 1.84
SPSB1-203ENST00000377399 SPATA31A6Q5VVP1 1343 aa26.51■■□□□ 1.83
SPSB1-203ENST00000377399 CCDC61Q9Y6R9 512 aa26.51■■□□□ 1.83
SPSB1-203ENST00000377399 PPIP5K1Q6PFW1 1433 aa26.5■■□□□ 1.83
SPSB1-203ENST00000377399 MST1RQ04912 1400 aa26.49■■□□□ 1.83
SPSB1-203ENST00000377399 RGPD8O14715 1765 aaPredicted RBP26.48■■□□□ 1.83
SPSB1-203ENST00000377399 C1orf167Q5SNV9 1468 aa26.48■■□□□ 1.83
SPSB1-203ENST00000377399 AHDC1Q5TGY3 1603 aaPredicted RBP26.47■■□□□ 1.83
SPSB1-203ENST00000377399 DDX10Q13206 875 aaKnown RBP26.46■■□□□ 1.83
SPSB1-203ENST00000377399 SLC12A5Q9H2X9 1139 aa26.45■■□□□ 1.82
SPSB1-203ENST00000377399 CABP1Q9NZU7 370 aa26.45■■□□□ 1.82
SPSB1-203ENST00000377399 MEX3CQ5U5Q3 659 aaKnown RBP26.44■■□□□ 1.82
SPSB1-203ENST00000377399 BRINP3Q76B58 766 aa26.44■■□□□ 1.82
SPSB1-203ENST00000377399 ESCO1Q5FWF5 840 aa26.43■■□□□ 1.82
SPSB1-203ENST00000377399 TERF2IPQ9NYB0 399 aa26.43■■□□□ 1.82
SPSB1-203ENST00000377399 KIF1AQ12756 1690 aa26.43■■□□□ 1.82
SPSB1-203ENST00000377399 HDGFL2Q7Z4V5 671 aaPredicted RBP26.42■■□□□ 1.82
SPSB1-203ENST00000377399 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
SPSB1-203ENST00000377399 ZNF772Q68DY9 489 aaPredicted RBP26.41■■□□□ 1.82
SPSB1-203ENST00000377399 PHF8Q9UPP1 1060 aa26.41■■□□□ 1.82
SPSB1-203ENST00000377399 PLEKHG3A1L390 1219 aa26.4■■□□□ 1.82
SPSB1-203ENST00000377399 SHPRHQ149N8 1683 aa26.4■■□□□ 1.82
SPSB1-203ENST00000377399 NGDNQ8NEJ9 315 aaKnown RBP26.39■■□□□ 1.82
SPSB1-203ENST00000377399 PMFBP1Q8TBY8 1022 aa26.39■■□□□ 1.82
SPSB1-203ENST00000377399 PANK3Q9H999 370 aa26.39■■□□□ 1.82
SPSB1-203ENST00000377399 LRP6O75581 1613 aa26.39■■□□□ 1.81
SPSB1-203ENST00000377399 A0A1W2PP64 1363 aa26.38■■□□□ 1.81
SPSB1-203ENST00000377399 ORAI2Q96SN7 254 aa26.37■■□□□ 1.81
SPSB1-203ENST00000377399 AKAP12Q02952 1782 aa26.37■■□□□ 1.81
SPSB1-203ENST00000377399 ACEP12821 1306 aa26.37■■□□□ 1.81
SPSB1-203ENST00000377399 CD163L1Q9NR16 1453 aa26.36■■□□□ 1.81
SPSB1-203ENST00000377399 POLR3AO14802 1390 aaPredicted RBP26.34■■□□□ 1.81
SPSB1-203ENST00000377399 KTN1Q86UP2 1357 aaKnown RBP26.34■■□□□ 1.81
SPSB1-203ENST00000377399 CPSF1Q10570 1443 aaKnown RBP26.34■■□□□ 1.81
SPSB1-203ENST00000377399 ZNF692Q9BU19 519 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms