RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 POGKQ9P215 609 aa20.72■□□□□ 0.91
UBE4B-203ENST00000377153 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
UBE4B-203ENST00000377153 RALGAPBQ86X10 1494 aa20.71■□□□□ 0.91
UBE4B-203ENST00000377153 SIRT1Q96EB6 747 aa20.71■□□□□ 0.91
UBE4B-203ENST00000377153 TRAK1Q9UPV9 953 aa20.71■□□□□ 0.91
UBE4B-203ENST00000377153 ADGRB2O60241 1585 aa20.71■□□□□ 0.91
UBE4B-203ENST00000377153 ILDR1Q86SU0 546 aaPredicted RBP20.7■□□□□ 0.9
UBE4B-203ENST00000377153 FMN2Q9NZ56 1722 aa20.7■□□□□ 0.9
UBE4B-203ENST00000377153 PRAM1Q96QH2 718 aa20.69■□□□□ 0.9
UBE4B-203ENST00000377153 QRICH2Q9H0J4 1663 aa20.69■□□□□ 0.9
UBE4B-203ENST00000377153 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
UBE4B-203ENST00000377153 WAPLQ7Z5K2 1190 aa20.68■□□□□ 0.9
UBE4B-203ENST00000377153 EIF3AQ14152 1382 aaKnown RBP20.68■□□□□ 0.9
UBE4B-203ENST00000377153 NBPF1Q3BBV0 1214 aa20.66■□□□□ 0.9
UBE4B-203ENST00000377153 SLAIN2Q9P270 581 aa20.66■□□□□ 0.9
UBE4B-203ENST00000377153 MST1RQ04912 1400 aa20.66■□□□□ 0.9
UBE4B-203ENST00000377153 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
UBE4B-203ENST00000377153 GPRASP1Q5JY77 1395 aa20.63■□□□□ 0.89
UBE4B-203ENST00000377153 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
UBE4B-203ENST00000377153 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
UBE4B-203ENST00000377153 ITSN1Q15811 1721 aa20.61■□□□□ 0.89
UBE4B-203ENST00000377153 KIF1AQ12756 1690 aa20.61■□□□□ 0.89
UBE4B-203ENST00000377153 CARD11Q9BXL7 1154 aa20.6■□□□□ 0.89
UBE4B-203ENST00000377153 C1orf167Q5SNV9 1468 aa20.6■□□□□ 0.89
UBE4B-203ENST00000377153 NHSL1Q5SYE7 1610 aa20.6■□□□□ 0.89
UBE4B-203ENST00000377153 MINK1Q8N4C8 1332 aaPredicted RBP20.59■□□□□ 0.89
UBE4B-203ENST00000377153 CENPJQ9HC77 1338 aaPredicted RBP20.59■□□□□ 0.89
UBE4B-203ENST00000377153 RGPD8O14715 1765 aaPredicted RBP20.59■□□□□ 0.89
UBE4B-203ENST00000377153 AHDC1Q5TGY3 1603 aaPredicted RBP20.58■□□□□ 0.89
UBE4B-203ENST00000377153 TULP4Q9NRJ4 1543 aa20.57■□□□□ 0.88
UBE4B-203ENST00000377153 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
UBE4B-203ENST00000377153 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
UBE4B-203ENST00000377153 USP32Q8NFA0 1604 aa20.54■□□□□ 0.88
UBE4B-203ENST00000377153 BRINP3Q76B58 766 aa20.54■□□□□ 0.88
UBE4B-203ENST00000377153 COL16A1Q07092 1604 aaPredicted RBP20.53■□□□□ 0.88
UBE4B-203ENST00000377153 HSPA1LP34931 641 aa20.53■□□□□ 0.88
UBE4B-203ENST00000377153 NUTM2FA1L443 756 aa20.52■□□□□ 0.88
UBE4B-203ENST00000377153 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
UBE4B-203ENST00000377153 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
UBE4B-203ENST00000377153 WASLO00401 505 aaPredicted RBP20.5■□□□□ 0.87
UBE4B-203ENST00000377153 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
UBE4B-203ENST00000377153 ATP7BP35670 1465 aa20.48■□□□□ 0.87
UBE4B-203ENST00000377153 USP47Q96K76 1375 aa20.47■□□□□ 0.87
UBE4B-203ENST00000377153 ORAI2Q96SN7 254 aa20.47■□□□□ 0.87
UBE4B-203ENST00000377153 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
UBE4B-203ENST00000377153 SHPRHQ149N8 1683 aa20.46■□□□□ 0.87
UBE4B-203ENST00000377153 SRPK2P78362 688 aaKnown RBP20.46■□□□□ 0.87
UBE4B-203ENST00000377153 NPHP3Q7Z494 1330 aa20.46■□□□□ 0.87
UBE4B-203ENST00000377153 CDK19Q9BWU1 502 aa20.44■□□□□ 0.86
UBE4B-203ENST00000377153 PHF8Q9UPP1 1060 aa20.43■□□□□ 0.86
UBE4B-203ENST00000377153 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
UBE4B-203ENST00000377153 JCADQ9P266 1359 aa20.41■□□□□ 0.86
UBE4B-203ENST00000377153 PXDNQ92626 1479 aa20.41■□□□□ 0.86
UBE4B-203ENST00000377153 NUDT16Q96DE0 195 aaKnown RBP20.4■□□□□ 0.86
UBE4B-203ENST00000377153 PRR36Q9H6K5 1346 aa20.4■□□□□ 0.86
UBE4B-203ENST00000377153 FOXO3O43524 673 aa20.39■□□□□ 0.85
UBE4B-203ENST00000377153 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
UBE4B-203ENST00000377153 ATAD2Q6PL18 1390 aa20.38■□□□□ 0.85
UBE4B-203ENST00000377153 ST20-MTHFSA0A0A6YYL1 179 aa20.38■□□□□ 0.85
UBE4B-203ENST00000377153 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
UBE4B-203ENST00000377153 LRRC59Q96AG4 307 aaKnown RBP20.38■□□□□ 0.85
UBE4B-203ENST00000377153 SOS2Q07890 1332 aaPredicted RBP20.37■□□□□ 0.85
UBE4B-203ENST00000377153 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
UBE4B-203ENST00000377153 CCDC61Q9Y6R9 512 aa20.37■□□□□ 0.85
UBE4B-203ENST00000377153 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
UBE4B-203ENST00000377153 PMFBP1Q8TBY8 1022 aa20.36■□□□□ 0.85
UBE4B-203ENST00000377153 MED1Q15648 1581 aaPredicted RBP20.36■□□□□ 0.85
UBE4B-203ENST00000377153 TRPM3Q9HCF6 1732 aaPredicted RBP20.36■□□□□ 0.85
UBE4B-203ENST00000377153 COL22A1Q8NFW1 1626 aaPredicted RBP20.35■□□□□ 0.85
UBE4B-203ENST00000377153 PSME1Q06323 249 aa20.35■□□□□ 0.85
UBE4B-203ENST00000377153 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
UBE4B-203ENST00000377153 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
UBE4B-203ENST00000377153 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
UBE4B-203ENST00000377153 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
UBE4B-203ENST00000377153 TMF1P82094 1093 aa20.32■□□□□ 0.84
UBE4B-203ENST00000377153 TNS3Q68CZ2 1445 aa20.32■□□□□ 0.84
UBE4B-203ENST00000377153 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
UBE4B-203ENST00000377153 KRT28Q7Z3Y7 464 aa20.31■□□□□ 0.84
UBE4B-203ENST00000377153 TESK2Q96S53 571 aa20.31■□□□□ 0.84
UBE4B-203ENST00000377153 ALS2Q96Q42 1657 aa20.31■□□□□ 0.84
UBE4B-203ENST00000377153 PNPLA6Q8IY17 1366 aa20.31■□□□□ 0.84
UBE4B-203ENST00000377153 CDCA8Q53HL2 280 aa20.3■□□□□ 0.84
UBE4B-203ENST00000377153 SBNO1A3KN83 1393 aa20.3■□□□□ 0.84
UBE4B-203ENST00000377153 ACEP12821 1306 aa20.29■□□□□ 0.84
UBE4B-203ENST00000377153 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
UBE4B-203ENST00000377153 MON2Q7Z3U7 1717 aa20.29■□□□□ 0.84
UBE4B-203ENST00000377153 ARHGEF10O15013 1369 aa20.29■□□□□ 0.84
UBE4B-203ENST00000377153 ABCA3Q99758 1704 aa20.28■□□□□ 0.84
UBE4B-203ENST00000377153 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
UBE4B-203ENST00000377153 DISP3Q9P2K9 1392 aa20.27■□□□□ 0.84
UBE4B-203ENST00000377153 PUS7Q96PZ0 661 aaKnown RBP20.27■□□□□ 0.84
UBE4B-203ENST00000377153 MARF1Q9Y4F3 1742 aaKnown RBP20.27■□□□□ 0.83
UBE4B-203ENST00000377153 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.83
UBE4B-203ENST00000377153 CABP1Q9NZU7 370 aa20.26■□□□□ 0.83
UBE4B-203ENST00000377153 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
UBE4B-203ENST00000377153 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
UBE4B-203ENST00000377153 LMOD2Q6P5Q4 547 aa20.25■□□□□ 0.83
UBE4B-203ENST00000377153 BRD4O60885 1362 aaPredicted RBP20.24■□□□□ 0.83
UBE4B-203ENST00000377153 MYOM1P52179 1685 aa20.24■□□□□ 0.83
UBE4B-203ENST00000377153 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms