RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
ABCF1-202ENST00000376545 CD109Q6YHK3 1445 aa13.93□□□□□ -0.18
ABCF1-202ENST00000376545 NSD3Q9BZ95 1437 aa13.93□□□□□ -0.18
ABCF1-202ENST00000376545 CFAP65Q6ZU64 1925 aaKnown RBP13.93□□□□□ -0.18
ABCF1-202ENST00000376545 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
ABCF1-202ENST00000376545 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
ABCF1-202ENST00000376545 TULP4Q9NRJ4 1543 aa13.91□□□□□ -0.18
ABCF1-202ENST00000376545 C8orf34Q49A92 452 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 NPM2Q86SE8 214 aaKnown RBP13.9□□□□□ -0.18
ABCF1-202ENST00000376545 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 PDE3AQ14432 1141 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 DDRGK1Q96HY6 314 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 NEO1Q92859 1461 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
ABCF1-202ENST00000376545 DIP2CQ9Y2E4 1556 aa13.9□□□□□ -0.19
ABCF1-202ENST00000376545 BCAR3O75815 825 aa13.89□□□□□ -0.19
ABCF1-202ENST00000376545 ADGRB2O60241 1585 aa13.89□□□□□ -0.19
ABCF1-202ENST00000376545 FAM161AQ3B820 660 aa13.89□□□□□ -0.19
ABCF1-202ENST00000376545 ZFYVE9O95405 1425 aa13.89□□□□□ -0.19
ABCF1-202ENST00000376545 NSD2O96028 1365 aa13.88□□□□□ -0.19
ABCF1-202ENST00000376545 RICTORQ6R327 1708 aa13.88□□□□□ -0.19
ABCF1-202ENST00000376545 CCDC27Q2M243 656 aa13.87□□□□□ -0.19
ABCF1-202ENST00000376545 SLC12A5Q9H2X9 1139 aa13.87□□□□□ -0.19
ABCF1-202ENST00000376545 TRAK1Q9UPV9 953 aa13.87□□□□□ -0.19
ABCF1-202ENST00000376545 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
ABCF1-202ENST00000376545 CGNL1Q0VF96 1302 aa13.86□□□□□ -0.19
ABCF1-202ENST00000376545 ANKRD36BQ8N2N9 1353 aa13.86□□□□□ -0.19
ABCF1-202ENST00000376545 ANKRD26Q9UPS8 1709 aa13.86□□□□□ -0.19
ABCF1-202ENST00000376545 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
ABCF1-202ENST00000376545 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
ABCF1-202ENST00000376545 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-202ENST00000376545 WDR63Q8IWG1 891 aa13.85□□□□□ -0.19
ABCF1-202ENST00000376545 RTL5Q5HYW3 569 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-202ENST00000376545 AAMPQ13685 434 aa13.84□□□□□ -0.19
ABCF1-202ENST00000376545 TMEM132EQ6IEE7 984 aa13.84□□□□□ -0.19
ABCF1-202ENST00000376545 MYO5BQ9ULV0 1848 aa13.83□□□□□ -0.2
ABCF1-202ENST00000376545 TMEM131LA2VDJ0 1609 aa13.83□□□□□ -0.2
ABCF1-202ENST00000376545 IGHDP01880 384 aa13.83□□□□□ -0.2
ABCF1-202ENST00000376545 NPM1P06748 294 aaKnown RBP eCLIP13.83□□□□□ -0.22e-7■■■■□ 21.1
ABCF1-202ENST00000376545 GGT6Q6P531 493 aa13.83□□□□□ -0.2
ABCF1-202ENST00000376545 PREX1Q8TCU6 1659 aa13.82□□□□□ -0.2
ABCF1-202ENST00000376545 VGFO15240 615 aaPredicted RBP13.82□□□□□ -0.2
ABCF1-202ENST00000376545 EVC2Q86UK5 1308 aa13.82□□□□□ -0.2
ABCF1-202ENST00000376545 CHGAP10645 457 aaKnown RBP13.82□□□□□ -0.2
ABCF1-202ENST00000376545 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
ABCF1-202ENST00000376545 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
ABCF1-202ENST00000376545 ZMYM3Q14202 1370 aa13.81□□□□□ -0.2
ABCF1-202ENST00000376545 CLUAP1Q96AJ1 413 aa13.81□□□□□ -0.2
ABCF1-202ENST00000376545 MED14O60244 1454 aa13.81□□□□□ -0.2
ABCF1-202ENST00000376545 COL3A1P02461 1466 aaPredicted RBP13.81□□□□□ -0.2
ABCF1-202ENST00000376545 MTHFSP49914 203 aa13.81□□□□□ -0.2
ABCF1-202ENST00000376545 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
ABCF1-202ENST00000376545 PTPRMP28827 1452 aa13.8□□□□□ -0.2
ABCF1-202ENST00000376545 NEFMP07197 916 aa13.79□□□□□ -0.2
ABCF1-202ENST00000376545 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
ABCF1-202ENST00000376545 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
ABCF1-202ENST00000376545 CFAP53Q96M91 514 aa13.78□□□□□ -0.2
ABCF1-202ENST00000376545 USP19O94966 1318 aa13.78□□□□□ -0.2
ABCF1-202ENST00000376545 CD163L1Q9NR16 1453 aa13.78□□□□□ -0.2
ABCF1-202ENST00000376545 OSCARQ8IYS5 282 aa13.77□□□□□ -0.2
ABCF1-202ENST00000376545 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.2
ABCF1-202ENST00000376545 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
ABCF1-202ENST00000376545 SLC52A1Q9NWF4 448 aa13.77□□□□□ -0.21
ABCF1-202ENST00000376545 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
ABCF1-202ENST00000376545 RGS3P49796 1198 aa13.76□□□□□ -0.21
ABCF1-202ENST00000376545 IDI1Q13907 227 aa13.76□□□□□ -0.21
ABCF1-202ENST00000376545 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
ABCF1-202ENST00000376545 RAPGEF3O95398 923 aa13.75□□□□□ -0.21
ABCF1-202ENST00000376545 CT47B1P0C2W7 299 aaPredicted RBP13.75□□□□□ -0.21
ABCF1-202ENST00000376545 TNNT2P45379 298 aaPredicted RBP13.75□□□□□ -0.21
ABCF1-202ENST00000376545 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
ABCF1-202ENST00000376545 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
ABCF1-202ENST00000376545 CDC42BPGQ6DT37 1551 aa13.74□□□□□ -0.21
ABCF1-202ENST00000376545 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
ABCF1-202ENST00000376545 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
ABCF1-202ENST00000376545 RLBP1P12271 317 aa13.74□□□□□ -0.21
ABCF1-202ENST00000376545 MYH16Q9H6N6 1097 aa13.73□□□□□ -0.21
ABCF1-202ENST00000376545 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
ABCF1-202ENST00000376545 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
ABCF1-202ENST00000376545 ATAD2Q6PL18 1390 aa13.73□□□□□ -0.21
ABCF1-202ENST00000376545 PNPLA6Q8IY17 1366 aa13.72□□□□□ -0.21
ABCF1-202ENST00000376545 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
ABCF1-202ENST00000376545 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
ABCF1-202ENST00000376545 PCDHB15Q9Y5E8 787 aa13.72□□□□□ -0.21
ABCF1-202ENST00000376545 ALKQ9UM73 1620 aa13.72□□□□□ -0.21
ABCF1-202ENST00000376545 SETD1AO15047 1707 aaKnown RBP13.72□□□□□ -0.21
ABCF1-202ENST00000376545 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
ABCF1-202ENST00000376545 ARHGEF40Q8TER5 1519 aa13.71□□□□□ -0.21
ABCF1-202ENST00000376545 REREQ9P2R6 1566 aa13.71□□□□□ -0.21
ABCF1-202ENST00000376545 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
ABCF1-202ENST00000376545 SLC4A3P48751 1232 aa13.7□□□□□ -0.22
ABCF1-202ENST00000376545 TNNQ9UQP3 1299 aa13.7□□□□□ -0.22
ABCF1-202ENST00000376545 IL16Q14005 1332 aa13.7□□□□□ -0.22
ABCF1-202ENST00000376545 NUTM2DQ5VT03 806 aaPredicted RBP13.7□□□□□ -0.22
ABCF1-202ENST00000376545 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
ABCF1-202ENST00000376545 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
ABCF1-202ENST00000376545 DLC1Q96QB1 1528 aa13.7□□□□□ -0.22
ABCF1-202ENST00000376545 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
ABCF1-202ENST00000376545 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms