RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 PNPLA6Q8IY17 1366 aa21.71■■□□□ 1.07
CLIC1-206ENST00000375779 TMEM132EQ6IEE7 984 aa21.7■■□□□ 1.06
CLIC1-206ENST00000375779 WAPLQ7Z5K2 1190 aa21.69■■□□□ 1.06
CLIC1-206ENST00000375779 MYOM2P54296 1465 aa21.68■■□□□ 1.06
CLIC1-206ENST00000375779 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
CLIC1-206ENST00000375779 KNDC1Q76NI1 1749 aa21.67■■□□□ 1.06
CLIC1-206ENST00000375779 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
CLIC1-206ENST00000375779 STAC3Q96MF2 364 aa21.65■■□□□ 1.06
CLIC1-206ENST00000375779 PLEKHH1Q9ULM0 1364 aa21.64■■□□□ 1.06
CLIC1-206ENST00000375779 STK26Q9P289 416 aa21.64■■□□□ 1.05
CLIC1-206ENST00000375779 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
CLIC1-206ENST00000375779 NUTM2BA6NNL0 878 aaPredicted RBP21.62■■□□□ 1.05
CLIC1-206ENST00000375779 NUTM2EB1AL46 878 aaPredicted RBP21.62■■□□□ 1.05
CLIC1-206ENST00000375779 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
CLIC1-206ENST00000375779 NUTM2AQ8IVF1 878 aaPredicted RBP21.62■■□□□ 1.05
CLIC1-206ENST00000375779 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
CLIC1-206ENST00000375779 NPHP3Q7Z494 1330 aa21.6■■□□□ 1.05
CLIC1-206ENST00000375779 CDK12Q9NYV4 1490 aaPredicted RBP21.6■■□□□ 1.05
CLIC1-206ENST00000375779 ESCO1Q5FWF5 840 aa21.6■■□□□ 1.05
CLIC1-206ENST00000375779 AFF2P51816 1311 aa21.59■■□□□ 1.05
CLIC1-206ENST00000375779 PXDNQ92626 1479 aa21.59■■□□□ 1.05
CLIC1-206ENST00000375779 RXRBP28702 533 aa21.58■■□□□ 1.05
CLIC1-206ENST00000375779 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.04
CLIC1-206ENST00000375779 FOXO3O43524 673 aa21.57■■□□□ 1.04
CLIC1-206ENST00000375779 FNBP4Q8N3X1 1017 aaPredicted RBP21.57■■□□□ 1.04
CLIC1-206ENST00000375779 ADGRB1O14514 1584 aa21.56■■□□□ 1.04
CLIC1-206ENST00000375779 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
CLIC1-206ENST00000375779 FMN2Q9NZ56 1722 aa21.55■■□□□ 1.04
CLIC1-206ENST00000375779 QTRT2Q9H974 415 aaKnown RBP21.54■■□□□ 1.04
CLIC1-206ENST00000375779 RBM6P78332 1123 aaKnown RBP21.52■■□□□ 1.04
CLIC1-206ENST00000375779 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
CLIC1-206ENST00000375779 PRAM1Q96QH2 718 aa21.51■■□□□ 1.03
CLIC1-206ENST00000375779 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
CLIC1-206ENST00000375779 DCAF11Q8TEB1 546 aa21.5■■□□□ 1.03
CLIC1-206ENST00000375779 UPF1Q92900 1129 aaKnown RBP eCLIP21.5■■□□□ 1.031e-12■□□□□ 10.4
CLIC1-206ENST00000375779 NGLY1Q96IV0 654 aa21.5■■□□□ 1.03
CLIC1-206ENST00000375779 NUTM2FA1L443 756 aa21.48■■□□□ 1.03
CLIC1-206ENST00000375779 ADAMTS2O95450 1211 aa21.48■■□□□ 1.03
CLIC1-206ENST00000375779 RGPD8O14715 1765 aaPredicted RBP21.48■■□□□ 1.03
CLIC1-206ENST00000375779 KIF1AQ12756 1690 aa21.47■■□□□ 1.03
CLIC1-206ENST00000375779 KRT28Q7Z3Y7 464 aa21.46■■□□□ 1.03
CLIC1-206ENST00000375779 PHF8Q9UPP1 1060 aa21.46■■□□□ 1.03
CLIC1-206ENST00000375779 ADGRB2O60241 1585 aa21.45■■□□□ 1.02
CLIC1-206ENST00000375779 XPCQ01831 940 aaPredicted RBP21.45■■□□□ 1.02
CLIC1-206ENST00000375779 KDM2AQ9Y2K7 1162 aa21.45■■□□□ 1.02
CLIC1-206ENST00000375779 BCL9LQ86UU0 1499 aa21.45■■□□□ 1.02
CLIC1-206ENST00000375779 USP21Q9UK80 565 aa21.44■■□□□ 1.02
CLIC1-206ENST00000375779 ANKARQ7Z5J8 1434 aa21.44■■□□□ 1.02
CLIC1-206ENST00000375779 TRPC5Q9UL62 973 aaPredicted RBP21.43■■□□□ 1.02
CLIC1-206ENST00000375779 ATRNO75882 1429 aa21.43■■□□□ 1.02
CLIC1-206ENST00000375779 SBNO1A3KN83 1393 aa21.42■■□□□ 1.02
CLIC1-206ENST00000375779 USP32Q8NFA0 1604 aa21.42■■□□□ 1.02
CLIC1-206ENST00000375779 POGKQ9P215 609 aa21.42■■□□□ 1.02
CLIC1-206ENST00000375779 TRAK1Q9UPV9 953 aa21.42■■□□□ 1.02
CLIC1-206ENST00000375779 MARF1Q9Y4F3 1742 aaKnown RBP21.42■■□□□ 1.02
CLIC1-206ENST00000375779 RGS12O14924 1447 aa21.41■■□□□ 1.02
CLIC1-206ENST00000375779 PSME1Q06323 249 aa21.4■■□□□ 1.02
CLIC1-206ENST00000375779 WASLO00401 505 aaPredicted RBP21.39■■□□□ 1.01
CLIC1-206ENST00000375779 SAFB2Q14151 953 aaKnown RBP eCLIP21.39■■□□□ 1.01
CLIC1-206ENST00000375779 PRR36Q9H6K5 1346 aa21.38■■□□□ 1.01
CLIC1-206ENST00000375779 MSH5O43196 834 aa21.38■■□□□ 1.01
CLIC1-206ENST00000375779 SLIT2O94813 1529 aa21.38■■□□□ 1.01
CLIC1-206ENST00000375779 EP400Q96L91 3159 aa21.38■■□□□ 1.01
CLIC1-206ENST00000375779 TNS3Q68CZ2 1445 aa21.37■■□□□ 1.01
CLIC1-206ENST00000375779 PIAS4Q8N2W9 510 aaPredicted RBP21.35■■□□□ 1.01
CLIC1-206ENST00000375779 KIAA1210Q9ULL0 1709 aa21.35■■□□□ 1.01
CLIC1-206ENST00000375779 GJD4Q96KN9 370 aaPredicted RBP21.34■■□□□ 1.01
CLIC1-206ENST00000375779 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.33■■□□□ 1.01
CLIC1-206ENST00000375779 UNC5CLQ8IV45 518 aa21.33■■□□□ 1.01
CLIC1-206ENST00000375779 PMFBP1Q8TBY8 1022 aa21.33■■□□□ 1.01
CLIC1-206ENST00000375779 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
CLIC1-206ENST00000375779 TULP4Q9NRJ4 1543 aa21.33■■□□□ 1
CLIC1-206ENST00000375779 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1
CLIC1-206ENST00000375779 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
CLIC1-206ENST00000375779 ARHGEF10O15013 1369 aa21.32■■□□□ 1
CLIC1-206ENST00000375779 ARHGEF28Q8N1W1 1705 aaKnown RBP21.32■■□□□ 1
CLIC1-206ENST00000375779 ONECUT3O60422 494 aaPredicted RBP21.31■■□□□ 1
CLIC1-206ENST00000375779 TRPM3Q9HCF6 1732 aaPredicted RBP21.31■■□□□ 1
CLIC1-206ENST00000375779 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
CLIC1-206ENST00000375779 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
CLIC1-206ENST00000375779 ALS2Q96Q42 1657 aa21.28■■□□□ 1
CLIC1-206ENST00000375779 ADRA2BP18089 450 aa21.28■■□□□ 1
CLIC1-206ENST00000375779 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
CLIC1-206ENST00000375779 FAM83GA6ND36 823 aa21.26■□□□□ 0.99
CLIC1-206ENST00000375779 ATP7BP35670 1465 aa21.26■□□□□ 0.99
CLIC1-206ENST00000375779 PLEKHG3A1L390 1219 aa21.25■□□□□ 0.99
CLIC1-206ENST00000375779 VPS72Q15906 364 aa21.25■□□□□ 0.99
CLIC1-206ENST00000375779 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
CLIC1-206ENST00000375779 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
CLIC1-206ENST00000375779 NWD2Q9ULI1 1742 aa21.24■□□□□ 0.99
CLIC1-206ENST00000375779 GLI3P10071 1580 aa21.24■□□□□ 0.99
CLIC1-206ENST00000375779 CDK19Q9BWU1 502 aa21.24■□□□□ 0.99
CLIC1-206ENST00000375779 POLR3AO14802 1390 aaPredicted RBP21.23■□□□□ 0.99
CLIC1-206ENST00000375779 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
CLIC1-206ENST00000375779 SRCAPQ6ZRS2 3230 aa21.23■□□□□ 0.99
CLIC1-206ENST00000375779 L3MBTL2Q969R5 705 aa21.23■□□□□ 0.99
CLIC1-206ENST00000375779 CCDC61Q9Y6R9 512 aa21.23■□□□□ 0.99
CLIC1-206ENST00000375779 RALGAPBQ86X10 1494 aa21.23■□□□□ 0.99
CLIC1-206ENST00000375779 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
CLIC1-206ENST00000375779 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms