RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 SPATA31A6Q5VVP1 1343 aa29■■■□□ 2.23
C6orf48-205ENST00000375640 COL16A1Q07092 1604 aaPredicted RBP28.99■■■□□ 2.23
C6orf48-205ENST00000375640 PRAM1Q96QH2 718 aa28.99■■■□□ 2.23
C6orf48-205ENST00000375640 ESCO1Q5FWF5 840 aa28.98■■■□□ 2.23
C6orf48-205ENST00000375640 DDX17Q92841 729 aaKnown RBP28.98■■■□□ 2.23
C6orf48-205ENST00000375640 POGKQ9P215 609 aa28.98■■■□□ 2.23
C6orf48-205ENST00000375640 LAMC1P11047 1609 aa28.96■■■□□ 2.23
C6orf48-205ENST00000375640 RGS17Q9UGC6 210 aaPredicted RBP28.95■■■□□ 2.22
C6orf48-205ENST00000375640 TRAK1Q9UPV9 953 aa28.95■■■□□ 2.22
C6orf48-205ENST00000375640 CDC42BPGQ6DT37 1551 aa28.93■■■□□ 2.22
C6orf48-205ENST00000375640 SOS2Q07890 1332 aaPredicted RBP28.93■■■□□ 2.22
C6orf48-205ENST00000375640 ADGRB1O14514 1584 aa28.92■■■□□ 2.22
C6orf48-205ENST00000375640 SOCS7O14512 581 aa28.92■■■□□ 2.22
C6orf48-205ENST00000375640 SAFB2Q14151 953 aaKnown RBP eCLIP28.92■■■□□ 2.22
C6orf48-205ENST00000375640 KNDC1Q76NI1 1749 aa28.91■■■□□ 2.22
C6orf48-205ENST00000375640 NUTM2FA1L443 756 aa28.91■■■□□ 2.22
C6orf48-205ENST00000375640 DLC1Q96QB1 1528 aa28.9■■■□□ 2.22
C6orf48-205ENST00000375640 SIN3AQ96ST3 1273 aa28.9■■■□□ 2.22
C6orf48-205ENST00000375640 NPHP3Q7Z494 1330 aa28.89■■■□□ 2.21
C6orf48-205ENST00000375640 FOXO3O43524 673 aa28.87■■■□□ 2.21
C6orf48-205ENST00000375640 L3MBTL2Q969R5 705 aa28.87■■■□□ 2.21
C6orf48-205ENST00000375640 MEX3CQ5U5Q3 659 aaKnown RBP28.86■■■□□ 2.21
C6orf48-205ENST00000375640 NUTM2BA6NNL0 878 aaPredicted RBP28.85■■■□□ 2.21
C6orf48-205ENST00000375640 NUTM2EB1AL46 878 aaPredicted RBP28.85■■■□□ 2.21
C6orf48-205ENST00000375640 NEUROD1Q13562 356 aa28.85■■■□□ 2.21
C6orf48-205ENST00000375640 NUTM2AQ8IVF1 878 aaPredicted RBP28.85■■■□□ 2.21
C6orf48-205ENST00000375640 NHSL1Q5SYE7 1610 aa28.84■■■□□ 2.21
C6orf48-205ENST00000375640 PNPLA6Q8IY17 1366 aa28.83■■■□□ 2.21
C6orf48-205ENST00000375640 LRP6O75581 1613 aa28.8■■■□□ 2.2
C6orf48-205ENST00000375640 NBPF1Q3BBV0 1214 aa28.8■■■□□ 2.2
C6orf48-205ENST00000375640 POTEAQ6S8J7 498 aa28.8■■■□□ 2.2
C6orf48-205ENST00000375640 MINK1Q8N4C8 1332 aaPredicted RBP28.79■■■□□ 2.2
C6orf48-205ENST00000375640 HIRIP3Q9BW71 556 aaPredicted RBP28.79■■■□□ 2.2
C6orf48-205ENST00000375640 PHF8Q9UPP1 1060 aa28.79■■■□□ 2.2
C6orf48-205ENST00000375640 SHPRHQ149N8 1683 aa28.79■■■□□ 2.2
C6orf48-205ENST00000375640 WASLO00401 505 aaPredicted RBP28.77■■■□□ 2.2
C6orf48-205ENST00000375640 XPCQ01831 940 aaPredicted RBP28.76■■■□□ 2.19
C6orf48-205ENST00000375640 ZNF772Q68DY9 489 aaPredicted RBP28.76■■■□□ 2.19
C6orf48-205ENST00000375640 KRT28Q7Z3Y7 464 aa28.74■■■□□ 2.19
C6orf48-205ENST00000375640 ANKARQ7Z5J8 1434 aa28.74■■■□□ 2.19
C6orf48-205ENST00000375640 EIF3AQ14152 1382 aaKnown RBP28.74■■■□□ 2.19
C6orf48-205ENST00000375640 PXDNQ92626 1479 aa28.72■■■□□ 2.19
C6orf48-205ENST00000375640 PSME1Q06323 249 aa28.72■■■□□ 2.19
C6orf48-205ENST00000375640 FMN2Q9NZ56 1722 aa28.72■■■□□ 2.19
C6orf48-205ENST00000375640 SPATA31A3Q5VYP0 1347 aa28.69■■■□□ 2.18
C6orf48-205ENST00000375640 ADGRB2O60241 1585 aa28.68■■■□□ 2.18
C6orf48-205ENST00000375640 PMFBP1Q8TBY8 1022 aa28.68■■■□□ 2.18
C6orf48-205ENST00000375640 ADAMTS2O95450 1211 aa28.67■■■□□ 2.18
C6orf48-205ENST00000375640 C8orf37Q96NL8 207 aa28.67■■■□□ 2.18
C6orf48-205ENST00000375640 PRR36Q9H6K5 1346 aa28.67■■■□□ 2.18
C6orf48-205ENST00000375640 KIAA1210Q9ULL0 1709 aa28.66■■■□□ 2.18
C6orf48-205ENST00000375640 NGLY1Q96IV0 654 aa28.65■■■□□ 2.18
C6orf48-205ENST00000375640 CDK19Q9BWU1 502 aa28.65■■■□□ 2.18
C6orf48-205ENST00000375640 AFF2P51816 1311 aa28.65■■■□□ 2.18
C6orf48-205ENST00000375640 NUDT16Q96DE0 195 aaKnown RBP28.64■■■□□ 2.18
C6orf48-205ENST00000375640 CENPJQ9HC77 1338 aaPredicted RBP28.62■■■□□ 2.17
C6orf48-205ENST00000375640 SBNO1A3KN83 1393 aa28.62■■■□□ 2.17
C6orf48-205ENST00000375640 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
C6orf48-205ENST00000375640 TULP4Q9NRJ4 1543 aa28.61■■■□□ 2.17
C6orf48-205ENST00000375640 NBPF8Q3BBV2 869 aa28.59■■■□□ 2.17
C6orf48-205ENST00000375640 NGDNQ8NEJ9 315 aaKnown RBP28.59■■■□□ 2.17
C6orf48-205ENST00000375640 RXRBP28702 533 aa28.58■■■□□ 2.17
C6orf48-205ENST00000375640 ROCK2O75116 1388 aaKnown RBP28.58■■■□□ 2.17
C6orf48-205ENST00000375640 GPRASP1Q5JY77 1395 aa28.58■■■□□ 2.17
C6orf48-205ENST00000375640 TONSLQ96HA7 1378 aa28.58■■■□□ 2.17
C6orf48-205ENST00000375640 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
C6orf48-205ENST00000375640 CCDC61Q9Y6R9 512 aa28.57■■■□□ 2.16
C6orf48-205ENST00000375640 QTRT2Q9H974 415 aaKnown RBP28.56■■■□□ 2.16
C6orf48-205ENST00000375640 ARHGEF28Q8N1W1 1705 aaKnown RBP28.55■■■□□ 2.16
C6orf48-205ENST00000375640 TNS3Q68CZ2 1445 aa28.55■■■□□ 2.16
C6orf48-205ENST00000375640 USP32Q8NFA0 1604 aa28.54■■■□□ 2.16
C6orf48-205ENST00000375640 COL22A1Q8NFW1 1626 aaPredicted RBP28.54■■■□□ 2.16
C6orf48-205ENST00000375640 ARHGEF10O15013 1369 aa28.54■■■□□ 2.16
C6orf48-205ENST00000375640 LMOD2Q6P5Q4 547 aa28.54■■■□□ 2.16
C6orf48-205ENST00000375640 USP21Q9UK80 565 aa28.53■■■□□ 2.16
C6orf48-205ENST00000375640 PLEKHG3A1L390 1219 aa28.52■■■□□ 2.16
C6orf48-205ENST00000375640 SRPK2P78362 688 aaKnown RBP28.51■■■□□ 2.15
C6orf48-205ENST00000375640 ATP7BP35670 1465 aa28.51■■■□□ 2.15
C6orf48-205ENST00000375640 RBM6P78332 1123 aaKnown RBP28.5■■■□□ 2.15
C6orf48-205ENST00000375640 HAP1P54257 671 aaPredicted RBP28.49■■■□□ 2.15
C6orf48-205ENST00000375640 CABLES1Q8TDN4 633 aa28.48■■■□□ 2.15
C6orf48-205ENST00000375640 RGPD8O14715 1765 aaPredicted RBP28.47■■■□□ 2.15
C6orf48-205ENST00000375640 CARD11Q9BXL7 1154 aa28.47■■■□□ 2.15
C6orf48-205ENST00000375640 CABP2Q9NPB3 220 aa28.47■■■□□ 2.15
C6orf48-205ENST00000375640 TRPC5Q9UL62 973 aaPredicted RBP28.47■■■□□ 2.15
C6orf48-205ENST00000375640 PAK3O75914 559 aaPredicted RBP28.46■■■□□ 2.15
C6orf48-205ENST00000375640 PCGF6Q9BYE7 350 aa28.46■■■□□ 2.15
C6orf48-205ENST00000375640 ACEP12821 1306 aa28.45■■■□□ 2.15
C6orf48-205ENST00000375640 EVC2Q86UK5 1308 aa28.45■■■□□ 2.15
C6orf48-205ENST00000375640 POLR3AO14802 1390 aaPredicted RBP28.45■■■□□ 2.14
C6orf48-205ENST00000375640 TRPM1Q7Z4N2 1603 aa28.44■■■□□ 2.14
C6orf48-205ENST00000375640 PLEKHG5O94827 1062 aa28.42■■■□□ 2.14
C6orf48-205ENST00000375640 CDK12Q9NYV4 1490 aaPredicted RBP28.41■■■□□ 2.14
C6orf48-205ENST00000375640 UNC5CLQ8IV45 518 aa28.39■■■□□ 2.14
C6orf48-205ENST00000375640 BCL9LQ86UU0 1499 aa28.39■■■□□ 2.13
C6orf48-205ENST00000375640 CABP1Q9NZU7 370 aa28.38■■■□□ 2.13
C6orf48-205ENST00000375640 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
C6orf48-205ENST00000375640 PPIP5K1Q6PFW1 1433 aa28.37■■■□□ 2.13
C6orf48-205ENST00000375640 ATRNO75882 1429 aa28.36■■■□□ 2.13
C6orf48-205ENST00000375640 RALGAPBQ86X10 1494 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms