RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 C19orf44Q9H6X5 657 aa28.93■■■□□ 2.22
SYNC-201ENST00000373484 PLEKHH1Q9ULM0 1364 aa28.92■■■□□ 2.22
SYNC-201ENST00000373484 TOM1O60784 492 aa28.92■■■□□ 2.22
SYNC-201ENST00000373484 TRAK1Q9UPV9 953 aa28.92■■■□□ 2.22
SYNC-201ENST00000373484 DCCP43146 1447 aa28.91■■■□□ 2.22
SYNC-201ENST00000373484 WAPLQ7Z5K2 1190 aa28.91■■■□□ 2.22
SYNC-201ENST00000373484 RALGAPBQ86X10 1494 aa28.9■■■□□ 2.22
SYNC-201ENST00000373484 ROCK2O75116 1388 aaKnown RBP28.89■■■□□ 2.21
SYNC-201ENST00000373484 PRAM1Q96QH2 718 aa28.87■■■□□ 2.21
SYNC-201ENST00000373484 GPRASP1Q5JY77 1395 aa28.87■■■□□ 2.21
SYNC-201ENST00000373484 CDC42BPGQ6DT37 1551 aa28.85■■■□□ 2.21
SYNC-201ENST00000373484 MIER1Q8N108 512 aa28.85■■■□□ 2.21
SYNC-201ENST00000373484 CADPS2Q86UW7 1296 aa28.85■■■□□ 2.21
SYNC-201ENST00000373484 ATF3P18847 181 aa28.84■■■□□ 2.21
SYNC-201ENST00000373484 POGKQ9P215 609 aa28.83■■■□□ 2.21
SYNC-201ENST00000373484 ADGRB2O60241 1585 aa28.81■■■□□ 2.2
SYNC-201ENST00000373484 SAFB2Q14151 953 aaKnown RBP eCLIP28.8■■■□□ 2.2
SYNC-201ENST00000373484 PIP4K2BP78356 416 aa28.79■■■□□ 2.2
SYNC-201ENST00000373484 ROBO1Q9Y6N7 1651 aa28.79■■■□□ 2.2
SYNC-201ENST00000373484 MST1RQ04912 1400 aa28.79■■■□□ 2.2
SYNC-201ENST00000373484 SLAIN2Q9P270 581 aa28.78■■■□□ 2.2
SYNC-201ENST00000373484 FMN2Q9NZ56 1722 aa28.78■■■□□ 2.2
SYNC-201ENST00000373484 QRICH2Q9H0J4 1663 aa28.78■■■□□ 2.2
SYNC-201ENST00000373484 ILDR1Q86SU0 546 aaPredicted RBP28.76■■■□□ 2.19
SYNC-201ENST00000373484 CARD11Q9BXL7 1154 aa28.76■■■□□ 2.19
SYNC-201ENST00000373484 CENPJQ9HC77 1338 aaPredicted RBP28.72■■■□□ 2.19
SYNC-201ENST00000373484 EIF3AQ14152 1382 aaKnown RBP28.72■■■□□ 2.19
SYNC-201ENST00000373484 MINK1Q8N4C8 1332 aaPredicted RBP28.71■■■□□ 2.19
SYNC-201ENST00000373484 RGPD8O14715 1765 aaPredicted RBP28.7■■■□□ 2.19
SYNC-201ENST00000373484 C1orf167Q5SNV9 1468 aa28.7■■■□□ 2.19
SYNC-201ENST00000373484 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
SYNC-201ENST00000373484 USP32Q8NFA0 1604 aa28.66■■■□□ 2.18
SYNC-201ENST00000373484 BRINP3Q76B58 766 aa28.64■■■□□ 2.17
SYNC-201ENST00000373484 WASLO00401 505 aaPredicted RBP28.63■■■□□ 2.17
SYNC-201ENST00000373484 TULP4Q9NRJ4 1543 aa28.63■■■□□ 2.17
SYNC-201ENST00000373484 NHSL1Q5SYE7 1610 aa28.62■■■□□ 2.17
SYNC-201ENST00000373484 YTHDC1Q96MU7 727 aaKnown RBP28.62■■■□□ 2.17
SYNC-201ENST00000373484 NUTM2FA1L443 756 aa28.61■■■□□ 2.17
SYNC-201ENST00000373484 PHLPP1O60346 1717 aa28.61■■■□□ 2.17
SYNC-201ENST00000373484 ANKARQ7Z5J8 1434 aa28.6■■■□□ 2.17
SYNC-201ENST00000373484 AHDC1Q5TGY3 1603 aaPredicted RBP28.6■■■□□ 2.17
SYNC-201ENST00000373484 SBNO2Q9Y2G9 1366 aa28.59■■■□□ 2.17
SYNC-201ENST00000373484 ITSN1Q15811 1721 aa28.59■■■□□ 2.17
SYNC-201ENST00000373484 ORAI2Q96SN7 254 aa28.58■■■□□ 2.17
SYNC-201ENST00000373484 KIF1AQ12756 1690 aa28.58■■■□□ 2.17
SYNC-201ENST00000373484 USP47Q96K76 1375 aa28.58■■■□□ 2.16
SYNC-201ENST00000373484 HSPA1LP34931 641 aa28.57■■■□□ 2.16
SYNC-201ENST00000373484 CDK19Q9BWU1 502 aa28.56■■■□□ 2.16
SYNC-201ENST00000373484 ESCO1Q5FWF5 840 aa28.55■■■□□ 2.16
SYNC-201ENST00000373484 ATP7BP35670 1465 aa28.55■■■□□ 2.16
SYNC-201ENST00000373484 TOPAZ1Q8N9V7 1692 aa28.55■■■□□ 2.16
SYNC-201ENST00000373484 PRR36Q9H6K5 1346 aa28.54■■■□□ 2.16
SYNC-201ENST00000373484 COL16A1Q07092 1604 aaPredicted RBP28.54■■■□□ 2.16
SYNC-201ENST00000373484 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
SYNC-201ENST00000373484 EVC2Q86UK5 1308 aa28.51■■■□□ 2.15
SYNC-201ENST00000373484 NUDT16Q96DE0 195 aaKnown RBP28.48■■■□□ 2.15
SYNC-201ENST00000373484 TESK2Q96S53 571 aa28.48■■■□□ 2.15
SYNC-201ENST00000373484 SRPK2P78362 688 aaKnown RBP28.48■■■□□ 2.15
SYNC-201ENST00000373484 PHF8Q9UPP1 1060 aa28.48■■■□□ 2.15
SYNC-201ENST00000373484 DDX17Q92841 729 aaKnown RBP28.47■■■□□ 2.15
SYNC-201ENST00000373484 CABP2Q9NPB3 220 aa28.46■■■□□ 2.15
SYNC-201ENST00000373484 NPHP3Q7Z494 1330 aa28.44■■■□□ 2.14
SYNC-201ENST00000373484 PXDNQ92626 1479 aa28.43■■■□□ 2.14
SYNC-201ENST00000373484 FOXO3O43524 673 aa28.43■■■□□ 2.14
SYNC-201ENST00000373484 CCDC61Q9Y6R9 512 aa28.43■■■□□ 2.14
SYNC-201ENST00000373484 SLC24A1O60721 1099 aa28.42■■■□□ 2.14
SYNC-201ENST00000373484 SOS2Q07890 1332 aaPredicted RBP28.42■■■□□ 2.14
SYNC-201ENST00000373484 PMFBP1Q8TBY8 1022 aa28.41■■■□□ 2.14
SYNC-201ENST00000373484 EIF4G2P78344 907 aaKnown RBP eCLIP28.4■■■□□ 2.14
SYNC-201ENST00000373484 SHPRHQ149N8 1683 aa28.39■■■□□ 2.14
SYNC-201ENST00000373484 PPIP5K1Q6PFW1 1433 aa28.39■■■□□ 2.14
SYNC-201ENST00000373484 ATAD2Q6PL18 1390 aa28.37■■■□□ 2.13
SYNC-201ENST00000373484 PLEKHG3A1L390 1219 aa28.36■■■□□ 2.13
SYNC-201ENST00000373484 TRPM3Q9HCF6 1732 aaPredicted RBP28.36■■■□□ 2.13
SYNC-201ENST00000373484 HSPA5P11021 654 aaKnown RBP28.36■■■□□ 2.13
SYNC-201ENST00000373484 POLR3AO14802 1390 aaPredicted RBP28.36■■■□□ 2.13
SYNC-201ENST00000373484 LRRC59Q96AG4 307 aaKnown RBP28.35■■■□□ 2.13
SYNC-201ENST00000373484 PUS7Q96PZ0 661 aaKnown RBP28.35■■■□□ 2.13
SYNC-201ENST00000373484 DISP3Q9P2K9 1392 aa28.35■■■□□ 2.13
SYNC-201ENST00000373484 XPCQ01831 940 aaPredicted RBP28.34■■■□□ 2.13
SYNC-201ENST00000373484 JCADQ9P266 1359 aa28.34■■■□□ 2.13
SYNC-201ENST00000373484 TMF1P82094 1093 aa28.34■■■□□ 2.13
SYNC-201ENST00000373484 NGDNQ8NEJ9 315 aaKnown RBP28.34■■■□□ 2.13
SYNC-201ENST00000373484 KRT28Q7Z3Y7 464 aa28.33■■■□□ 2.13
SYNC-201ENST00000373484 AKAP12Q02952 1782 aa28.32■■■□□ 2.12
SYNC-201ENST00000373484 ACEP12821 1306 aa28.32■■■□□ 2.12
SYNC-201ENST00000373484 PSME1Q06323 249 aa28.32■■■□□ 2.12
SYNC-201ENST00000373484 CABP1Q9NZU7 370 aa28.31■■■□□ 2.12
SYNC-201ENST00000373484 COL22A1Q8NFW1 1626 aaPredicted RBP28.28■■■□□ 2.12
SYNC-201ENST00000373484 SBNO1A3KN83 1393 aa28.28■■■□□ 2.12
SYNC-201ENST00000373484 ALS2Q96Q42 1657 aa28.28■■■□□ 2.12
SYNC-201ENST00000373484 PNPLA6Q8IY17 1366 aa28.28■■■□□ 2.12
SYNC-201ENST00000373484 TNS3Q68CZ2 1445 aa28.27■■■□□ 2.12
SYNC-201ENST00000373484 SPATA31A3Q5VYP0 1347 aa28.26■■■□□ 2.11
SYNC-201ENST00000373484 MON2Q7Z3U7 1717 aa28.25■■■□□ 2.11
SYNC-201ENST00000373484 CDCA8Q53HL2 280 aa28.25■■■□□ 2.11
SYNC-201ENST00000373484 MYOM1P52179 1685 aa28.23■■■□□ 2.11
SYNC-201ENST00000373484 NINLQ9Y2I6 1382 aa28.23■■■□□ 2.11
SYNC-201ENST00000373484 CPSF1Q10570 1443 aaKnown RBP28.22■■■□□ 2.11
SYNC-201ENST00000373484 CD163L1Q9NR16 1453 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms