RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 TRAK1Q9UPV9 953 aa33.95■■■■□ 3.03
CITED4-201ENST00000372638 DLC1Q96QB1 1528 aa33.94■■■■□ 3.02
CITED4-201ENST00000372638 PRAM1Q96QH2 718 aa33.94■■■■□ 3.02
CITED4-201ENST00000372638 POGKQ9P215 609 aa33.93■■■■□ 3.02
CITED4-201ENST00000372638 KIAA1210Q9ULL0 1709 aa33.92■■■■□ 3.02
CITED4-201ENST00000372638 C1orf167Q5SNV9 1468 aa33.9■■■■□ 3.02
CITED4-201ENST00000372638 CDC42BPGQ6DT37 1551 aa33.89■■■■□ 3.02
CITED4-201ENST00000372638 SAFB2Q14151 953 aaKnown RBP eCLIP33.87■■■■□ 3.01
CITED4-201ENST00000372638 PHLPP1O60346 1717 aa33.87■■■■□ 3.01
CITED4-201ENST00000372638 NBPF1Q3BBV0 1214 aa33.86■■■■□ 3.01
CITED4-201ENST00000372638 TONSLQ96HA7 1378 aa33.84■■■■□ 3.01
CITED4-201ENST00000372638 AHDC1Q5TGY3 1603 aaPredicted RBP33.83■■■■□ 3.01
CITED4-201ENST00000372638 MED1Q15648 1581 aaPredicted RBP33.82■■■■□ 3.01
CITED4-201ENST00000372638 ORAI2Q96SN7 254 aa33.81■■■■□ 3
CITED4-201ENST00000372638 NUTM2FA1L443 756 aa33.79■■■■□ 3
CITED4-201ENST00000372638 COL16A1Q07092 1604 aaPredicted RBP33.78■■■■□ 3
CITED4-201ENST00000372638 ESCO1Q5FWF5 840 aa33.78■■■■□ 3
CITED4-201ENST00000372638 PHF23Q9BUL5 403 aaPredicted RBP33.76■■■□□ 2.99
CITED4-201ENST00000372638 ARHGEF28Q8N1W1 1705 aaKnown RBP33.76■■■□□ 2.99
CITED4-201ENST00000372638 FMN2Q9NZ56 1722 aa33.76■■■□□ 2.99
CITED4-201ENST00000372638 MINK1Q8N4C8 1332 aaPredicted RBP33.75■■■□□ 2.99
CITED4-201ENST00000372638 NHSL1Q5SYE7 1610 aa33.75■■■□□ 2.99
CITED4-201ENST00000372638 JCADQ9P266 1359 aa33.75■■■□□ 2.99
CITED4-201ENST00000372638 DDX17Q92841 729 aaKnown RBP33.73■■■□□ 2.99
CITED4-201ENST00000372638 TRPM1Q7Z4N2 1603 aa33.72■■■□□ 2.99
CITED4-201ENST00000372638 NBPF8Q3BBV2 869 aa33.72■■■□□ 2.99
CITED4-201ENST00000372638 HIRIP3Q9BW71 556 aaPredicted RBP33.72■■■□□ 2.99
CITED4-201ENST00000372638 ADGRB2O60241 1585 aa33.71■■■□□ 2.99
CITED4-201ENST00000372638 CLSPNQ9HAW4 1339 aa33.7■■■□□ 2.99
CITED4-201ENST00000372638 LRRC59Q96AG4 307 aaKnown RBP33.7■■■□□ 2.99
CITED4-201ENST00000372638 ROCK2O75116 1388 aaKnown RBP33.67■■■□□ 2.98
CITED4-201ENST00000372638 WASLO00401 505 aaPredicted RBP33.67■■■□□ 2.98
CITED4-201ENST00000372638 NPHP3Q7Z494 1330 aa33.65■■■□□ 2.98
CITED4-201ENST00000372638 SOS2Q07890 1332 aaPredicted RBP33.64■■■□□ 2.98
CITED4-201ENST00000372638 EIF3AQ14152 1382 aaKnown RBP33.64■■■□□ 2.98
CITED4-201ENST00000372638 FOXO3O43524 673 aa33.63■■■□□ 2.97
CITED4-201ENST00000372638 CENPJQ9HC77 1338 aaPredicted RBP33.62■■■□□ 2.97
CITED4-201ENST00000372638 ANKARQ7Z5J8 1434 aa33.62■■■□□ 2.97
CITED4-201ENST00000372638 RGPD8O14715 1765 aaPredicted RBP33.62■■■□□ 2.97
CITED4-201ENST00000372638 SPATA31A6Q5VVP1 1343 aa33.61■■■□□ 2.97
CITED4-201ENST00000372638 PHF8Q9UPP1 1060 aa33.61■■■□□ 2.97
CITED4-201ENST00000372638 SHPRHQ149N8 1683 aa33.59■■■□□ 2.97
CITED4-201ENST00000372638 GPRASP1Q5JY77 1395 aa33.59■■■□□ 2.97
CITED4-201ENST00000372638 KIF1AQ12756 1690 aa33.58■■■□□ 2.97
CITED4-201ENST00000372638 CCER1Q8TC90 406 aaPredicted RBP33.58■■■□□ 2.97
CITED4-201ENST00000372638 TULP4Q9NRJ4 1543 aa33.56■■■□□ 2.96
CITED4-201ENST00000372638 TIMELESSQ9UNS1 1208 aa33.56■■■□□ 2.96
CITED4-201ENST00000372638 CDK19Q9BWU1 502 aa33.55■■■□□ 2.96
CITED4-201ENST00000372638 USP32Q8NFA0 1604 aa33.55■■■□□ 2.96
CITED4-201ENST00000372638 CARD11Q9BXL7 1154 aa33.54■■■□□ 2.96
CITED4-201ENST00000372638 PRR36Q9H6K5 1346 aa33.54■■■□□ 2.96
CITED4-201ENST00000372638 RALGAPBQ86X10 1494 aa33.54■■■□□ 2.96
CITED4-201ENST00000372638 XPCQ01831 940 aaPredicted RBP33.53■■■□□ 2.96
CITED4-201ENST00000372638 PXDNQ92626 1479 aa33.52■■■□□ 2.96
CITED4-201ENST00000372638 PNPLA6Q8IY17 1366 aa33.51■■■□□ 2.96
CITED4-201ENST00000372638 KRT28Q7Z3Y7 464 aa33.51■■■□□ 2.95
CITED4-201ENST00000372638 PMFBP1Q8TBY8 1022 aa33.51■■■□□ 2.95
CITED4-201ENST00000372638 NUDT16Q96DE0 195 aaKnown RBP33.51■■■□□ 2.95
CITED4-201ENST00000372638 QRICH2Q9H0J4 1663 aa33.49■■■□□ 2.95
CITED4-201ENST00000372638 NUTM2BA6NNL0 878 aaPredicted RBP33.48■■■□□ 2.95
CITED4-201ENST00000372638 NUTM2EB1AL46 878 aaPredicted RBP33.48■■■□□ 2.95
CITED4-201ENST00000372638 PSME1Q06323 249 aa33.48■■■□□ 2.95
CITED4-201ENST00000372638 NUTM2AQ8IVF1 878 aaPredicted RBP33.48■■■□□ 2.95
CITED4-201ENST00000372638 SRPK2P78362 688 aaKnown RBP33.45■■■□□ 2.95
CITED4-201ENST00000372638 ATP7BP35670 1465 aa33.45■■■□□ 2.94
CITED4-201ENST00000372638 LRP6O75581 1613 aa33.44■■■□□ 2.94
CITED4-201ENST00000372638 MEX3CQ5U5Q3 659 aaKnown RBP33.44■■■□□ 2.94
CITED4-201ENST00000372638 CCDC61Q9Y6R9 512 aa33.44■■■□□ 2.94
CITED4-201ENST00000372638 NGDNQ8NEJ9 315 aaKnown RBP33.42■■■□□ 2.94
CITED4-201ENST00000372638 SPATA31A3Q5VYP0 1347 aa33.42■■■□□ 2.94
CITED4-201ENST00000372638 ITSN1Q15811 1721 aa33.41■■■□□ 2.94
CITED4-201ENST00000372638 CABP2Q9NPB3 220 aa33.4■■■□□ 2.94
CITED4-201ENST00000372638 EVC2Q86UK5 1308 aa33.4■■■□□ 2.94
CITED4-201ENST00000372638 RGS17Q9UGC6 210 aaPredicted RBP33.38■■■□□ 2.93
CITED4-201ENST00000372638 SBNO1A3KN83 1393 aa33.38■■■□□ 2.93
CITED4-201ENST00000372638 PLEKHG3A1L390 1219 aa33.35■■■□□ 2.93
CITED4-201ENST00000372638 COL22A1Q8NFW1 1626 aaPredicted RBP33.35■■■□□ 2.93
CITED4-201ENST00000372638 TNS3Q68CZ2 1445 aa33.34■■■□□ 2.93
CITED4-201ENST00000372638 SBNO2Q9Y2G9 1366 aa33.34■■■□□ 2.93
CITED4-201ENST00000372638 TOPAZ1Q8N9V7 1692 aa33.32■■■□□ 2.92
CITED4-201ENST00000372638 ADAMTS2O95450 1211 aa33.3■■■□□ 2.92
CITED4-201ENST00000372638 LMOD2Q6P5Q4 547 aa33.3■■■□□ 2.92
CITED4-201ENST00000372638 ACEP12821 1306 aa33.3■■■□□ 2.92
CITED4-201ENST00000372638 PPIP5K1Q6PFW1 1433 aa33.29■■■□□ 2.92
CITED4-201ENST00000372638 POLR3AO14802 1390 aaPredicted RBP33.28■■■□□ 2.92
CITED4-201ENST00000372638 ARHGEF10O15013 1369 aa33.28■■■□□ 2.92
CITED4-201ENST00000372638 TRPM3Q9HCF6 1732 aaPredicted RBP33.26■■■□□ 2.91
CITED4-201ENST00000372638 ZNF772Q68DY9 489 aaPredicted RBP33.26■■■□□ 2.91
CITED4-201ENST00000372638 C8orf37Q96NL8 207 aa33.26■■■□□ 2.91
CITED4-201ENST00000372638 CABP1Q9NZU7 370 aa33.26■■■□□ 2.91
CITED4-201ENST00000372638 ST20-MTHFSA0A0A6YYL1 179 aa33.25■■■□□ 2.91
CITED4-201ENST00000372638 PAK3O75914 559 aaPredicted RBP33.25■■■□□ 2.91
CITED4-201ENST00000372638 POTEAQ6S8J7 498 aa33.24■■■□□ 2.91
CITED4-201ENST00000372638 NGLY1Q96IV0 654 aa33.23■■■□□ 2.91
CITED4-201ENST00000372638 SLC24A1O60721 1099 aa33.22■■■□□ 2.91
CITED4-201ENST00000372638 AFF2P51816 1311 aa33.21■■■□□ 2.91
CITED4-201ENST00000372638 ATAD2Q6PL18 1390 aa33.2■■■□□ 2.91
CITED4-201ENST00000372638 HAP1P54257 671 aaPredicted RBP33.2■■■□□ 2.91
CITED4-201ENST00000372638 USP47Q96K76 1375 aa33.19■■■□□ 2.9
CITED4-201ENST00000372638 CABLES1Q8TDN4 633 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms