RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
CTPS1-202ENST00000372621 ABCC3O15438 1527 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 NEFMP07197 916 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 TRAK1Q9UPV9 953 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 SIGLEC1Q9BZZ2 1709 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 PIK3C2BO00750 1634 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 SLC12A5Q9H2X9 1139 aa16.55■□□□□ 0.24
CTPS1-202ENST00000372621 ARHGEF28Q8N1W1 1705 aaKnown RBP16.54■□□□□ 0.24
CTPS1-202ENST00000372621 MORC1Q86VD1 984 aa16.54■□□□□ 0.24
CTPS1-202ENST00000372621 GLI2P10070 1586 aa16.54■□□□□ 0.24
CTPS1-202ENST00000372621 CAMSAP1Q5T5Y3 1602 aa16.54■□□□□ 0.24
CTPS1-202ENST00000372621 CGNL1Q0VF96 1302 aa16.53■□□□□ 0.24
CTPS1-202ENST00000372621 IGHDP01880 384 aa16.53■□□□□ 0.24
CTPS1-202ENST00000372621 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
CTPS1-202ENST00000372621 CHGAP10645 457 aaKnown RBP16.52■□□□□ 0.23
CTPS1-202ENST00000372621 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
CTPS1-202ENST00000372621 TULP4Q9NRJ4 1543 aa16.51■□□□□ 0.23
CTPS1-202ENST00000372621 CD109Q6YHK3 1445 aa16.51■□□□□ 0.23
CTPS1-202ENST00000372621 TMEM132EQ6IEE7 984 aa16.51■□□□□ 0.23
CTPS1-202ENST00000372621 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
CTPS1-202ENST00000372621 RGS3P49796 1198 aa16.5■□□□□ 0.23
CTPS1-202ENST00000372621 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
CTPS1-202ENST00000372621 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
CTPS1-202ENST00000372621 GGT6Q6P531 493 aa16.49■□□□□ 0.23
CTPS1-202ENST00000372621 WDR63Q8IWG1 891 aa16.49■□□□□ 0.23
CTPS1-202ENST00000372621 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
CTPS1-202ENST00000372621 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
CTPS1-202ENST00000372621 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
CTPS1-202ENST00000372621 ANKRD36BQ8N2N9 1353 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 TNNT2P45379 298 aaPredicted RBP16.47■□□□□ 0.23
CTPS1-202ENST00000372621 PANK1Q8TE04 598 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 NSD2O96028 1365 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 SLC4A3P48751 1232 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 MTHFSP49914 203 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
CTPS1-202ENST00000372621 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
CTPS1-202ENST00000372621 AAMPQ13685 434 aa16.45■□□□□ 0.22
CTPS1-202ENST00000372621 USP19O94966 1318 aa16.45■□□□□ 0.22
CTPS1-202ENST00000372621 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
CTPS1-202ENST00000372621 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
CTPS1-202ENST00000372621 NFKBIBQ15653 356 aa16.43■□□□□ 0.22
CTPS1-202ENST00000372621 MAPK8IP3Q9UPT6 1336 aa16.43■□□□□ 0.22
CTPS1-202ENST00000372621 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
CTPS1-202ENST00000372621 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
CTPS1-202ENST00000372621 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
CTPS1-202ENST00000372621 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
CTPS1-202ENST00000372621 VGFO15240 615 aaPredicted RBP16.42■□□□□ 0.22
CTPS1-202ENST00000372621 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
CTPS1-202ENST00000372621 ZFYVE9O95405 1425 aa16.42■□□□□ 0.22
CTPS1-202ENST00000372621 NEO1Q92859 1461 aa16.42■□□□□ 0.22
CTPS1-202ENST00000372621 RLBP1P12271 317 aa16.41■□□□□ 0.22
CTPS1-202ENST00000372621 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
CTPS1-202ENST00000372621 NLRP1Q9C000 1473 aa16.4■□□□□ 0.22
CTPS1-202ENST00000372621 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
CTPS1-202ENST00000372621 ZMYM3Q14202 1370 aa16.4■□□□□ 0.22
CTPS1-202ENST00000372621 MYO5BQ9ULV0 1848 aa16.4■□□□□ 0.22
CTPS1-202ENST00000372621 TNNQ9UQP3 1299 aa16.4■□□□□ 0.22
CTPS1-202ENST00000372621 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
CTPS1-202ENST00000372621 ABCC11Q96J66 1382 aa16.39■□□□□ 0.21
CTPS1-202ENST00000372621 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
CTPS1-202ENST00000372621 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
CTPS1-202ENST00000372621 RICTORQ6R327 1708 aa16.39■□□□□ 0.21
CTPS1-202ENST00000372621 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
CTPS1-202ENST00000372621 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
CTPS1-202ENST00000372621 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
CTPS1-202ENST00000372621 CLTCQ00610 1675 aaKnown RBP16.38■□□□□ 0.21
CTPS1-202ENST00000372621 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
CTPS1-202ENST00000372621 SEC24BO95487 1268 aa16.38■□□□□ 0.21
CTPS1-202ENST00000372621 MYH16Q9H6N6 1097 aa16.38■□□□□ 0.21
CTPS1-202ENST00000372621 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
CTPS1-202ENST00000372621 TMEM131LA2VDJ0 1609 aa16.36■□□□□ 0.21
CTPS1-202ENST00000372621 PTPRMP28827 1452 aa16.36■□□□□ 0.21
CTPS1-202ENST00000372621 U2AF1L5P0DN76 240 aaPredicted RBP16.36■□□□□ 0.21
CTPS1-202ENST00000372621 U2AF1Q01081 240 aaKnown RBP eCLIP16.36■□□□□ 0.21
CTPS1-202ENST00000372621 IDI1Q13907 227 aa16.36■□□□□ 0.21
CTPS1-202ENST00000372621 PLEKHF1Q96S99 279 aa16.36■□□□□ 0.21
CTPS1-202ENST00000372621 MED14O60244 1454 aa16.35■□□□□ 0.21
CTPS1-202ENST00000372621 GSE1Q14687 1217 aa16.35■□□□□ 0.21
CTPS1-202ENST00000372621 BCL2L13Q9BXK5 485 aa16.35■□□□□ 0.21
CTPS1-202ENST00000372621 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
CTPS1-202ENST00000372621 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
CTPS1-202ENST00000372621 CT47B1P0C2W7 299 aaPredicted RBP16.34■□□□□ 0.21
CTPS1-202ENST00000372621 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.21
CTPS1-202ENST00000372621 MVPQ14764 893 aaKnown RBP16.33■□□□□ 0.2
CTPS1-202ENST00000372621 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
CTPS1-202ENST00000372621 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
CTPS1-202ENST00000372621 TRIM35Q9UPQ4 493 aa16.31■□□□□ 0.2
CTPS1-202ENST00000372621 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
CTPS1-202ENST00000372621 ATAD2Q6PL18 1390 aa16.31■□□□□ 0.2
CTPS1-202ENST00000372621 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTPS1-202ENST00000372621 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
CTPS1-202ENST00000372621 FRAT2O75474 233 aaPredicted RBP16.3■□□□□ 0.2
CTPS1-202ENST00000372621 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
CTPS1-202ENST00000372621 FYB1O15117 783 aa16.3■□□□□ 0.2
CTPS1-202ENST00000372621 IL27Q8NEV9 243 aa16.3■□□□□ 0.2
CTPS1-202ENST00000372621 YEATS2Q9ULM3 1422 aa16.29■□□□□ 0.2
CTPS1-202ENST00000372621 TSR2Q969E8 191 aaKnown RBP16.29■□□□□ 0.2
CTPS1-202ENST00000372621 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms