RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
SCAF11-202ENST00000369367 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-202ENST00000369367 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-202ENST00000369367 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
SCAF11-202ENST00000369367 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
SCAF11-202ENST00000369367 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
SCAF11-202ENST00000369367 CCDC30Q5VVM6 783 aa12.11□□□□□ -0.47
SCAF11-202ENST00000369367 CNTLNQ9NXG0 1405 aa12.11□□□□□ -0.47
SCAF11-202ENST00000369367 ERC2O15083 957 aa12.1□□□□□ -0.47
SCAF11-202ENST00000369367 ZKSCAN1P17029 563 aaPredicted RBP12.1□□□□□ -0.47
SCAF11-202ENST00000369367 SLC26A8Q96RN1 970 aa12.1□□□□□ -0.47
SCAF11-202ENST00000369367 PIP4K2BP78356 416 aa12.1□□□□□ -0.47
SCAF11-202ENST00000369367 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
SCAF11-202ENST00000369367 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
SCAF11-202ENST00000369367 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
SCAF11-202ENST00000369367 FBXW7Q969H0 707 aa12.09□□□□□ -0.47
SCAF11-202ENST00000369367 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
SCAF11-202ENST00000369367 REC8O95072 547 aa12.09□□□□□ -0.47
SCAF11-202ENST00000369367 CENPQQ7L2Z9 268 aaPredicted RBP12.08□□□□□ -0.47
SCAF11-202ENST00000369367 NOP58Q9Y2X3 529 aaKnown RBP12.08□□□□□ -0.47
SCAF11-202ENST00000369367 DRC7Q8IY82 874 aa12.08□□□□□ -0.48
SCAF11-202ENST00000369367 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
SCAF11-202ENST00000369367 DZIP1LQ8IYY4 767 aaKnown RBP12.08□□□□□ -0.48
SCAF11-202ENST00000369367 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
SCAF11-202ENST00000369367 CABP4P57796 275 aa12.08□□□□□ -0.48
SCAF11-202ENST00000369367 RILPL2Q969X0 211 aa12.08□□□□□ -0.48
SCAF11-202ENST00000369367 CCDC7Q96M83 1385 aa12.08□□□□□ -0.48
SCAF11-202ENST00000369367 ERICH2A1L162 156 aa12.08□□□□□ -0.48
SCAF11-202ENST00000369367 HMOX1P09601 288 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 SF3A1Q15459 793 aaKnown RBP12.07□□□□□ -0.48
SCAF11-202ENST00000369367 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
SCAF11-202ENST00000369367 ZBED9Q6R2W3 1325 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 GNAI3P08754 354 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 APPP05067 770 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 FAM184AQ8NB25 1140 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
SCAF11-202ENST00000369367 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
SCAF11-202ENST00000369367 TRIM29Q14134 588 aa12.06□□□□□ -0.48
SCAF11-202ENST00000369367 MTHFSP49914 203 aa12.06□□□□□ -0.48
SCAF11-202ENST00000369367 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
SCAF11-202ENST00000369367 UBTFL1P0CB47 393 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-202ENST00000369367 BRD4O60885 1362 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-202ENST00000369367 FANCAO15360 1455 aa12.05□□□□□ -0.48
SCAF11-202ENST00000369367 H3BQV1 296 aa12.05□□□□□ -0.48
SCAF11-202ENST00000369367 IFFO2Q5TF58 517 aa12.05□□□□□ -0.48
SCAF11-202ENST00000369367 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
SCAF11-202ENST00000369367 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
SCAF11-202ENST00000369367 TBC1D2BQ9UPU7 963 aa12.04□□□□□ -0.48
SCAF11-202ENST00000369367 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
SCAF11-202ENST00000369367 PHF14O94880 888 aa12.04□□□□□ -0.48
SCAF11-202ENST00000369367 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
SCAF11-202ENST00000369367 KIF7Q2M1P5 1343 aa12.04□□□□□ -0.48
SCAF11-202ENST00000369367 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
SCAF11-202ENST00000369367 CEP89Q96ST8 783 aa12.03□□□□□ -0.48
SCAF11-202ENST00000369367 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
SCAF11-202ENST00000369367 AIMP1Q12904 312 aaKnown RBP12.03□□□□□ -0.48
SCAF11-202ENST00000369367 CPLX1O14810 134 aa12.03□□□□□ -0.48
SCAF11-202ENST00000369367 DHX16O60231 1041 aaKnown RBP12.03□□□□□ -0.48
SCAF11-202ENST00000369367 ERC1Q8IUD2 1116 aa12.03□□□□□ -0.48
SCAF11-202ENST00000369367 TOM1O60784 492 aa12.02□□□□□ -0.48
SCAF11-202ENST00000369367 SLC3A2P08195 630 aaKnown RBP12.02□□□□□ -0.48
SCAF11-202ENST00000369367 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.48
SCAF11-202ENST00000369367 RAD21O60216 631 aa12.02□□□□□ -0.49
SCAF11-202ENST00000369367 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
SCAF11-202ENST00000369367 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
SCAF11-202ENST00000369367 NUDT16Q96DE0 195 aaKnown RBP12.01□□□□□ -0.49
SCAF11-202ENST00000369367 PRKAR2BP31323 418 aa12.01□□□□□ -0.49
SCAF11-202ENST00000369367 TPM2P07951 284 aa12.01□□□□□ -0.49
SCAF11-202ENST00000369367 CT47B1P0C2W7 299 aaPredicted RBP12□□□□□ -0.49
SCAF11-202ENST00000369367 RALYLQ86SE5 291 aaKnown RBP12□□□□□ -0.49
SCAF11-202ENST00000369367 CLASRPQ8N2M8 674 aaKnown RBP12□□□□□ -0.49
SCAF11-202ENST00000369367 ZNF652Q9Y2D9 606 aa12□□□□□ -0.49
SCAF11-202ENST00000369367 STARD3NLO95772 234 aa12□□□□□ -0.49
SCAF11-202ENST00000369367 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
SCAF11-202ENST00000369367 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
SCAF11-202ENST00000369367 MAP3K1Q13233 1512 aa12□□□□□ -0.49
SCAF11-202ENST00000369367 NINLQ9Y2I6 1382 aa12□□□□□ -0.49
SCAF11-202ENST00000369367 HIP1O00291 1037 aa11.99□□□□□ -0.49
SCAF11-202ENST00000369367 RRP1P56182 461 aaKnown RBP11.99□□□□□ -0.49
SCAF11-202ENST00000369367 SULT6B1Q6IMI4 303 aa11.99□□□□□ -0.49
SCAF11-202ENST00000369367 SART3Q15020 963 aaKnown RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 AMOTQ4VCS5 1084 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 PHF8Q9UPP1 1060 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 FAM135AQ9P2D6 1515 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 TNRQ92752 1358 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 SAFBQ15424 915 aaKnown RBP eCLIP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 PPP1R1BQ9UD71 204 aaPredicted RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 COG6Q9Y2V7 657 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 MSH6P52701 1360 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 MSNP26038 577 aaKnown RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 CCDC27Q2M243 656 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
SCAF11-202ENST00000369367 NGLY1Q96IV0 654 aa11.98□□□□□ -0.49
SCAF11-202ENST00000369367 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms