RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PREX1Q8TCU6 1659 aa13.39□□□□□ -0.27
TPM3-209ENST00000368527 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
TPM3-209ENST00000368527 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
TPM3-209ENST00000368527 AAMPQ13685 434 aa13.38□□□□□ -0.27
TPM3-209ENST00000368527 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
TPM3-209ENST00000368527 CDCA7LQ96GN5 454 aa13.38□□□□□ -0.27
TPM3-209ENST00000368527 TRAK1Q9UPV9 953 aa13.38□□□□□ -0.27
TPM3-209ENST00000368527 ARHGEF28Q8N1W1 1705 aaKnown RBP13.38□□□□□ -0.27
TPM3-209ENST00000368527 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
TPM3-209ENST00000368527 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
TPM3-209ENST00000368527 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
TPM3-209ENST00000368527 EXOC6Q8TAG9 804 aa13.37□□□□□ -0.27
TPM3-209ENST00000368527 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
TPM3-209ENST00000368527 TMEM131LA2VDJ0 1609 aa13.37□□□□□ -0.27
TPM3-209ENST00000368527 DIP2BQ9P265 1576 aa13.37□□□□□ -0.27
TPM3-209ENST00000368527 MED14O60244 1454 aa13.36□□□□□ -0.27
TPM3-209ENST00000368527 YEATS2Q9ULM3 1422 aa13.36□□□□□ -0.27
TPM3-209ENST00000368527 IDI1Q13907 227 aa13.35□□□□□ -0.27
TPM3-209ENST00000368527 CCDC27Q2M243 656 aa13.34□□□□□ -0.27
TPM3-209ENST00000368527 RUNDC1Q96C34 613 aa13.34□□□□□ -0.27
TPM3-209ENST00000368527 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
TPM3-209ENST00000368527 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
TPM3-209ENST00000368527 TULP4Q9NRJ4 1543 aa13.34□□□□□ -0.27
TPM3-209ENST00000368527 CENPQQ7L2Z9 268 aaPredicted RBP13.33□□□□□ -0.28
TPM3-209ENST00000368527 WDR63Q8IWG1 891 aa13.33□□□□□ -0.28
TPM3-209ENST00000368527 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
TPM3-209ENST00000368527 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
TPM3-209ENST00000368527 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
TPM3-209ENST00000368527 APAF1O14727 1248 aa13.31□□□□□ -0.28
TPM3-209ENST00000368527 PDE3AQ14432 1141 aa13.31□□□□□ -0.28
TPM3-209ENST00000368527 SPATA31D1Q6ZQQ2 1576 aa13.31□□□□□ -0.28
TPM3-209ENST00000368527 YTHDC2Q9H6S0 1430 aaKnown RBP13.3□□□□□ -0.28
TPM3-209ENST00000368527 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
TPM3-209ENST00000368527 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
TPM3-209ENST00000368527 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
TPM3-209ENST00000368527 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
TPM3-209ENST00000368527 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.3□□□□□ -0.28
TPM3-209ENST00000368527 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
TPM3-209ENST00000368527 SLC12A5Q9H2X9 1139 aa13.3□□□□□ -0.28
TPM3-209ENST00000368527 PTPRMP28827 1452 aa13.29□□□□□ -0.28
TPM3-209ENST00000368527 SHPRHQ149N8 1683 aa13.29□□□□□ -0.28
TPM3-209ENST00000368527 HDGFL2Q7Z4V5 671 aaPredicted RBP13.28□□□□□ -0.28
TPM3-209ENST00000368527 CFAP65Q6ZU64 1925 aaKnown RBP13.28□□□□□ -0.28
TPM3-209ENST00000368527 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
TPM3-209ENST00000368527 WWC1Q8IX03 1113 aa13.27□□□□□ -0.29
TPM3-209ENST00000368527 IPO9Q96P70 1041 aaKnown RBP13.27□□□□□ -0.29
TPM3-209ENST00000368527 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
TPM3-209ENST00000368527 POGKQ9P215 609 aa13.27□□□□□ -0.29
TPM3-209ENST00000368527 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
TPM3-209ENST00000368527 NOP58Q9Y2X3 529 aaKnown RBP13.27□□□□□ -0.29
TPM3-209ENST00000368527 ALKQ9UM73 1620 aa13.27□□□□□ -0.29
TPM3-209ENST00000368527 ARHGEF40Q8TER5 1519 aa13.26□□□□□ -0.29
TPM3-209ENST00000368527 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
TPM3-209ENST00000368527 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
TPM3-209ENST00000368527 ATP7BP35670 1465 aa13.25□□□□□ -0.29
TPM3-209ENST00000368527 KDM2BQ8NHM5 1336 aa13.25□□□□□ -0.29
TPM3-209ENST00000368527 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
TPM3-209ENST00000368527 MTHFSP49914 203 aa13.25□□□□□ -0.29
TPM3-209ENST00000368527 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
TPM3-209ENST00000368527 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
TPM3-209ENST00000368527 A2ML1A8K2U0 1454 aa13.24□□□□□ -0.29
TPM3-209ENST00000368527 BACH2Q9BYV9 841 aa13.24□□□□□ -0.29
TPM3-209ENST00000368527 ADGRB2O60241 1585 aa13.24□□□□□ -0.29
TPM3-209ENST00000368527 A0A1W2PP64 1363 aa13.23□□□□□ -0.29
TPM3-209ENST00000368527 IL16Q14005 1332 aa13.23□□□□□ -0.29
TPM3-209ENST00000368527 PLIN1O60240 522 aa13.23□□□□□ -0.29
TPM3-209ENST00000368527 PDE4AP27815 886 aa13.23□□□□□ -0.29
TPM3-209ENST00000368527 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
TPM3-209ENST00000368527 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
TPM3-209ENST00000368527 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
TPM3-209ENST00000368527 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
TPM3-209ENST00000368527 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
TPM3-209ENST00000368527 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
TPM3-209ENST00000368527 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
TPM3-209ENST00000368527 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
TPM3-209ENST00000368527 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.29
TPM3-209ENST00000368527 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
TPM3-209ENST00000368527 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
TPM3-209ENST00000368527 STK26Q9P289 416 aa13.19□□□□□ -0.3
TPM3-209ENST00000368527 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
TPM3-209ENST00000368527 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
TPM3-209ENST00000368527 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
TPM3-209ENST00000368527 U2AF1L5P0DN76 240 aaPredicted RBP13.18□□□□□ -0.3
TPM3-209ENST00000368527 U2AF1Q01081 240 aaKnown RBP eCLIP13.18□□□□□ -0.32e-12■□□□□ 10.2
TPM3-209ENST00000368527 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
TPM3-209ENST00000368527 TECPR2O15040 1411 aa13.18□□□□□ -0.3
TPM3-209ENST00000368527 COL3A1P02461 1466 aaPredicted RBP13.17□□□□□ -0.3
TPM3-209ENST00000368527 NLRP1Q9C000 1473 aa13.17□□□□□ -0.3
TPM3-209ENST00000368527 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
TPM3-209ENST00000368527 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
TPM3-209ENST00000368527 NEFMP07197 916 aa13.17□□□□□ -0.3
TPM3-209ENST00000368527 CALD1Q05682 793 aaKnown RBP13.17□□□□□ -0.3
TPM3-209ENST00000368527 C20orf194Q5TEA3 1177 aa13.17□□□□□ -0.3
TPM3-209ENST00000368527 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
TPM3-209ENST00000368527 CDK19Q9BWU1 502 aa13.17□□□□□ -0.3
TPM3-209ENST00000368527 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
TPM3-209ENST00000368527 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
TPM3-209ENST00000368527 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
TPM3-209ENST00000368527 FYB1O15117 783 aa13.16□□□□□ -0.3
TPM3-209ENST00000368527 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms