RNA–Protein interactions for RNA: ENST00000368358.3

HCN3-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN3, Length 3,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-201ENST00000368358 BRD4O60885 1362 aaPredicted RBP17.63■□□□□ 0.41
HCN3-201ENST00000368358 MROH2AA6NES4 1674 aa17.63■□□□□ 0.41
HCN3-201ENST00000368358 U2AF1L5P0DN76 240 aaPredicted RBP17.62■□□□□ 0.41
HCN3-201ENST00000368358 U2AF1Q01081 240 aaKnown RBP eCLIP17.62■□□□□ 0.41
HCN3-201ENST00000368358 MYOM2P54296 1465 aa17.62■□□□□ 0.41
HCN3-201ENST00000368358 YTHDC2Q9H6S0 1430 aaKnown RBP17.62■□□□□ 0.41
HCN3-201ENST00000368358 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
HCN3-201ENST00000368358 NGDNQ8NEJ9 315 aaKnown RBP17.62■□□□□ 0.41
HCN3-201ENST00000368358 MTHFSP49914 203 aa17.61■□□□□ 0.41
HCN3-201ENST00000368358 ARHGEF40Q8TER5 1519 aa17.61■□□□□ 0.41
HCN3-201ENST00000368358 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
HCN3-201ENST00000368358 METP08581 1390 aa17.6■□□□□ 0.41
HCN3-201ENST00000368358 ANKLE2Q86XL3 938 aa17.59■□□□□ 0.41
HCN3-201ENST00000368358 PLIN1O60240 522 aa17.59■□□□□ 0.41
HCN3-201ENST00000368358 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.41
HCN3-201ENST00000368358 TMEM2Q9UHN6 1383 aa17.58■□□□□ 0.4
HCN3-201ENST00000368358 NUDT16Q96DE0 195 aaKnown RBP17.58■□□□□ 0.4
HCN3-201ENST00000368358 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.4
HCN3-201ENST00000368358 APAF1O14727 1248 aa17.58■□□□□ 0.4
HCN3-201ENST00000368358 RCAN3Q9UKA8 241 aa17.58■□□□□ 0.4
HCN3-201ENST00000368358 HSPA2P54652 639 aa17.57■□□□□ 0.4
HCN3-201ENST00000368358 WASLO00401 505 aaPredicted RBP17.56■□□□□ 0.4
HCN3-201ENST00000368358 NEFMP07197 916 aa17.55■□□□□ 0.4
HCN3-201ENST00000368358 AGLP35573 1532 aa17.55■□□□□ 0.4
HCN3-201ENST00000368358 PREX1Q8TCU6 1659 aa17.54■□□□□ 0.4
HCN3-201ENST00000368358 PIK3C2BO00750 1634 aa17.54■□□□□ 0.4
HCN3-201ENST00000368358 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
HCN3-201ENST00000368358 ZRANB1Q9UGI0 708 aa17.53■□□□□ 0.4
HCN3-201ENST00000368358 KCNA6P17658 529 aa17.52■□□□□ 0.4
HCN3-201ENST00000368358 NEXMIFQ5QGS0 1516 aa17.52■□□□□ 0.4
HCN3-201ENST00000368358 NME9Q86XW9 330 aa17.52■□□□□ 0.4
HCN3-201ENST00000368358 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
HCN3-201ENST00000368358 RBM19Q9Y4C8 960 aaKnown RBP17.52■□□□□ 0.39
HCN3-201ENST00000368358 ATAD2Q6PL18 1390 aa17.51■□□□□ 0.39
HCN3-201ENST00000368358 XPCQ01831 940 aaPredicted RBP17.5■□□□□ 0.39
HCN3-201ENST00000368358 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
HCN3-201ENST00000368358 CANXP27824 592 aaKnown RBP17.49■□□□□ 0.39
HCN3-201ENST00000368358 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
HCN3-201ENST00000368358 COG3Q96JB2 828 aa17.49■□□□□ 0.39
HCN3-201ENST00000368358 LAS1LQ9Y4W2 734 aaKnown RBP17.49■□□□□ 0.39
HCN3-201ENST00000368358 A0A1W2PP64 1363 aa17.49■□□□□ 0.39
HCN3-201ENST00000368358 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
HCN3-201ENST00000368358 MAPK8IP3Q9UPT6 1336 aa17.49■□□□□ 0.39
HCN3-201ENST00000368358 MYO5BQ9ULV0 1848 aa17.49■□□□□ 0.39
HCN3-201ENST00000368358 LRPPRCP42704 1394 aaKnown RBP17.48■□□□□ 0.39
HCN3-201ENST00000368358 HMOX1P09601 288 aa17.48■□□□□ 0.39
HCN3-201ENST00000368358 FYB1O15117 783 aa17.47■□□□□ 0.39
HCN3-201ENST00000368358 ZC3H13Q5T200 1668 aaKnown RBP17.47■□□□□ 0.39
HCN3-201ENST00000368358 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
HCN3-201ENST00000368358 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
HCN3-201ENST00000368358 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
HCN3-201ENST00000368358 SMG6Q86US8 1419 aaKnown RBP17.45■□□□□ 0.38
HCN3-201ENST00000368358 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
HCN3-201ENST00000368358 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
HCN3-201ENST00000368358 TMEM131LA2VDJ0 1609 aa17.45■□□□□ 0.38
HCN3-201ENST00000368358 ROBO2Q9HCK4 1378 aa17.44■□□□□ 0.38
HCN3-201ENST00000368358 ALKQ9UM73 1620 aa17.44■□□□□ 0.38
HCN3-201ENST00000368358 GOLGA2Q08379 1002 aa17.44■□□□□ 0.38
HCN3-201ENST00000368358 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
HCN3-201ENST00000368358 PPLO60437 1756 aa17.43■□□□□ 0.38
HCN3-201ENST00000368358 EMILIN1Q9Y6C2 1016 aa17.43■□□□□ 0.38
HCN3-201ENST00000368358 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
HCN3-201ENST00000368358 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 NLRP6P59044 892 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 PDE3BQ13370 1112 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 NPM2Q86SE8 214 aaKnown RBP17.42■□□□□ 0.38
HCN3-201ENST00000368358 ABCC11Q96J66 1382 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
HCN3-201ENST00000368358 ACEP12821 1306 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
HCN3-201ENST00000368358 ADGRB1O14514 1584 aa17.41■□□□□ 0.38
HCN3-201ENST00000368358 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
HCN3-201ENST00000368358 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
HCN3-201ENST00000368358 TBX22Q9Y458 520 aa17.41■□□□□ 0.38
HCN3-201ENST00000368358 IQGAP1P46940 1657 aa17.4■□□□□ 0.38
HCN3-201ENST00000368358 PSME1Q06323 249 aa17.4■□□□□ 0.38
HCN3-201ENST00000368358 TCP11L2Q8N4U5 519 aa17.4■□□□□ 0.38
HCN3-201ENST00000368358 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
HCN3-201ENST00000368358 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
HCN3-201ENST00000368358 SPATA31D1Q6ZQQ2 1576 aa17.4■□□□□ 0.38
HCN3-201ENST00000368358 BCL11AQ9H165 835 aa17.4■□□□□ 0.38
HCN3-201ENST00000368358 AMPHP49418 695 aa17.39■□□□□ 0.37
HCN3-201ENST00000368358 ABTB2Q8N961 1025 aa17.38■□□□□ 0.37
HCN3-201ENST00000368358 FOXO3O43524 673 aa17.38■□□□□ 0.37
HCN3-201ENST00000368358 BCL2L13Q9BXK5 485 aa17.38■□□□□ 0.37
HCN3-201ENST00000368358 QRICH2Q9H0J4 1663 aa17.37■□□□□ 0.37
HCN3-201ENST00000368358 NLRP1Q9C000 1473 aa17.37■□□□□ 0.37
HCN3-201ENST00000368358 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
HCN3-201ENST00000368358 LAMC1P11047 1609 aa17.37■□□□□ 0.37
HCN3-201ENST00000368358 REREQ9P2R6 1566 aa17.36■□□□□ 0.37
HCN3-201ENST00000368358 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
HCN3-201ENST00000368358 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
HCN3-201ENST00000368358 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
HCN3-201ENST00000368358 RUNDC1Q96C34 613 aa17.34■□□□□ 0.37
HCN3-201ENST00000368358 SETBP1Q9Y6X0 1596 aa17.34■□□□□ 0.37
HCN3-201ENST00000368358 PTPRMP28827 1452 aa17.34■□□□□ 0.37
HCN3-201ENST00000368358 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
HCN3-201ENST00000368358 PRKAR2BP31323 418 aa17.33■□□□□ 0.36
HCN3-201ENST00000368358 C20orf194Q5TEA3 1177 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms