RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
PTPRK-206ENST00000368215 NUTM2GQ5VZR2 741 aa10.6□□□□□ -0.71
PTPRK-206ENST00000368215 A2MP01023 1474 aa10.6□□□□□ -0.71
PTPRK-206ENST00000368215 UHRF1BP1Q6BDS2 1440 aa10.6□□□□□ -0.71
PTPRK-206ENST00000368215 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.59□□□□□ -0.71
PTPRK-206ENST00000368215 C14orf93Q9H972 538 aaKnown RBP10.59□□□□□ -0.71
PTPRK-206ENST00000368215 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
PTPRK-206ENST00000368215 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
PTPRK-206ENST00000368215 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
PTPRK-206ENST00000368215 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
PTPRK-206ENST00000368215 C1orf115Q9H7X2 142 aa10.58□□□□□ -0.72
PTPRK-206ENST00000368215 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
PTPRK-206ENST00000368215 GNAI1P63096 354 aa10.58□□□□□ -0.72
PTPRK-206ENST00000368215 RRS1Q15050 365 aaKnown RBP10.58□□□□□ -0.72
PTPRK-206ENST00000368215 THUMPD2Q9BTF0 503 aaKnown RBP10.58□□□□□ -0.72
PTPRK-206ENST00000368215 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
PTPRK-206ENST00000368215 ABCC10Q5T3U5 1492 aa10.58□□□□□ -0.72
PTPRK-206ENST00000368215 FBLN1P23142 703 aa10.57□□□□□ -0.72
PTPRK-206ENST00000368215 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
PTPRK-206ENST00000368215 TMPOP42166 694 aaKnown RBP10.57□□□□□ -0.72
PTPRK-206ENST00000368215 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
PTPRK-206ENST00000368215 MBD5Q9P267 1494 aa10.57□□□□□ -0.72
PTPRK-206ENST00000368215 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
PTPRK-206ENST00000368215 SLC26A8Q96RN1 970 aa10.57□□□□□ -0.72
PTPRK-206ENST00000368215 KCNJ4P48050 445 aa10.56□□□□□ -0.72
PTPRK-206ENST00000368215 RARSP54136 660 aaKnown RBP10.56□□□□□ -0.72
PTPRK-206ENST00000368215 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
PTPRK-206ENST00000368215 ABCC2Q92887 1545 aa10.56□□□□□ -0.72
PTPRK-206ENST00000368215 DENND4BO75064 1496 aaPredicted RBP10.56□□□□□ -0.72
PTPRK-206ENST00000368215 HMMRO75330 724 aa10.56□□□□□ -0.72
PTPRK-206ENST00000368215 PLEKHH1Q9ULM0 1364 aa10.55□□□□□ -0.72
PTPRK-206ENST00000368215 GSE1Q14687 1217 aa10.55□□□□□ -0.72
PTPRK-206ENST00000368215 WDR7Q9Y4E6 1490 aa10.55□□□□□ -0.72
PTPRK-206ENST00000368215 API5Q9BZZ5 524 aaKnown RBP10.55□□□□□ -0.72
PTPRK-206ENST00000368215 RTEL1-TNFRSF6BF6WH68 1400 aa10.55□□□□□ -0.72
PTPRK-206ENST00000368215 ATAD2Q6PL18 1390 aa10.55□□□□□ -0.72
PTPRK-206ENST00000368215 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
PTPRK-206ENST00000368215 MVPQ14764 893 aaKnown RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 EIF2S2P20042 333 aaKnown RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 SULT6B1Q6IMI4 303 aa10.54□□□□□ -0.72
PTPRK-206ENST00000368215 ATF7IPQ6VMQ6 1270 aa10.54□□□□□ -0.72
PTPRK-206ENST00000368215 COL17A1Q9UMD9 1497 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 C22orf23Q9BZE7 217 aa10.54□□□□□ -0.72
PTPRK-206ENST00000368215 LRPPRCP42704 1394 aaKnown RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 TWISTNBQ3B726 338 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
PTPRK-206ENST00000368215 NLRP6P59044 892 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 TSPYL4Q9UJ04 414 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 MCCP23508 829 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 GBP4Q96PP9 640 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 ABCA8O94911 1581 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
PTPRK-206ENST00000368215 L1TD1Q5T7N2 865 aaKnown RBP10.52□□□□□ -0.72
PTPRK-206ENST00000368215 NME9Q86XW9 330 aa10.52□□□□□ -0.72
PTPRK-206ENST00000368215 EMILIN1Q9Y6C2 1016 aa10.52□□□□□ -0.72
PTPRK-206ENST00000368215 FRAT2O75474 233 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-206ENST00000368215 FOXD4L5Q5VV16 416 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-206ENST00000368215 FOXD4L4Q8WXT5 416 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-206ENST00000368215 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
PTPRK-206ENST00000368215 IGHDP01880 384 aa10.52□□□□□ -0.73
PTPRK-206ENST00000368215 AAMPQ13685 434 aa10.52□□□□□ -0.73
PTPRK-206ENST00000368215 NUDT16Q96DE0 195 aaKnown RBP10.52□□□□□ -0.73
PTPRK-206ENST00000368215 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
PTPRK-206ENST00000368215 DCTN1Q14203 1278 aa10.52□□□□□ -0.73
PTPRK-206ENST00000368215 TMEM57Q8N5G2 664 aa10.52□□□□□ -0.73
PTPRK-206ENST00000368215 ADGBQ8N7X0 1667 aa10.51□□□□□ -0.73
PTPRK-206ENST00000368215 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
PTPRK-206ENST00000368215 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
PTPRK-206ENST00000368215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTPRK-206ENST00000368215 TNNQ9UQP3 1299 aa10.51□□□□□ -0.73
PTPRK-206ENST00000368215 FCHSD2O94868 740 aa10.5□□□□□ -0.73
PTPRK-206ENST00000368215 PLCB2Q00722 1185 aa10.5□□□□□ -0.73
PTPRK-206ENST00000368215 ZNF330Q9Y3S2 320 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-206ENST00000368215 CCDC61Q9Y6R9 512 aa10.5□□□□□ -0.73
PTPRK-206ENST00000368215 GPRASP1Q5JY77 1395 aa10.5□□□□□ -0.73
PTPRK-206ENST00000368215 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
PTPRK-206ENST00000368215 KIAA1211Q6ZU35 1233 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 SAMD9LQ8IVG5 1584 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 GOLGA6L3A6NEY3 463 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 TEFQ10587 303 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 DMRT2Q9Y5R5 561 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 LRRIQ1Q96JM4 1722 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 FGD1P98174 961 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 PSME1Q06323 249 aa10.49□□□□□ -0.73
PTPRK-206ENST00000368215 NAP1L5Q96NT1 182 aaPredicted RBP10.49□□□□□ -0.73
PTPRK-206ENST00000368215 ZNF518AQ6AHZ1 1483 aa10.48□□□□□ -0.73
PTPRK-206ENST00000368215 NAP1L2Q9ULW6 460 aaPredicted RBP10.48□□□□□ -0.73
PTPRK-206ENST00000368215 FYB1O15117 783 aa10.48□□□□□ -0.73
PTPRK-206ENST00000368215 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
PTPRK-206ENST00000368215 EIF2AK4Q9P2K8 1649 aaKnown RBP10.48□□□□□ -0.73
PTPRK-206ENST00000368215 NINLQ9Y2I6 1382 aa10.48□□□□□ -0.73
PTPRK-206ENST00000368215 MAST1Q9Y2H9 1570 aa10.48□□□□□ -0.73
PTPRK-206ENST00000368215 ABTB2Q8N961 1025 aa10.48□□□□□ -0.73
PTPRK-206ENST00000368215 CFAP65Q6ZU64 1925 aaKnown RBP10.47□□□□□ -0.73
PTPRK-206ENST00000368215 CT47B1P0C2W7 299 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-206ENST00000368215 TRIM27P14373 513 aa10.47□□□□□ -0.73
PTPRK-206ENST00000368215 CEBPAP49715 358 aaPredicted RBP10.47□□□□□ -0.73
PTPRK-206ENST00000368215 MIS18AQ9NYP9 233 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms