RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 HSP90B1P14625 803 aaKnown RBP15.22■□□□□ 0.03
PTPRK-203ENST00000368207 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
PTPRK-203ENST00000368207 RTEL1-TNFRSF6BF6WH68 1400 aa15.22■□□□□ 0.03
PTPRK-203ENST00000368207 WDR62O43379 1518 aa15.22■□□□□ 0.03
PTPRK-203ENST00000368207 GPATCH8Q9UKJ3 1502 aaKnown RBP15.21■□□□□ 0.03
PTPRK-203ENST00000368207 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
PTPRK-203ENST00000368207 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.03
PTPRK-203ENST00000368207 IDI1Q13907 227 aa15.21■□□□□ 0.03
PTPRK-203ENST00000368207 NAP1L5Q96NT1 182 aaPredicted RBP15.21■□□□□ 0.03
PTPRK-203ENST00000368207 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
PTPRK-203ENST00000368207 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
PTPRK-203ENST00000368207 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
PTPRK-203ENST00000368207 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
PTPRK-203ENST00000368207 DDX58O95786 925 aaKnown RBP15.19■□□□□ 0.02
PTPRK-203ENST00000368207 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
PTPRK-203ENST00000368207 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
PTPRK-203ENST00000368207 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
PTPRK-203ENST00000368207 ATP10BO94823 1461 aa15.18■□□□□ 0.02
PTPRK-203ENST00000368207 TWISTNBQ3B726 338 aaPredicted RBP15.18■□□□□ 0.02
PTPRK-203ENST00000368207 RPRD2Q5VT52 1461 aaKnown RBP15.17■□□□□ 0.02
PTPRK-203ENST00000368207 DIAPH3Q9NSV4 1193 aa15.17■□□□□ 0.02
PTPRK-203ENST00000368207 FANCAO15360 1455 aa15.17■□□□□ 0.02
PTPRK-203ENST00000368207 FOXD4L6Q3SYB3 417 aaPredicted RBP15.17■□□□□ 0.02
PTPRK-203ENST00000368207 FOXD4L3Q6VB84 417 aaPredicted RBP15.17■□□□□ 0.02
PTPRK-203ENST00000368207 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
PTPRK-203ENST00000368207 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
PTPRK-203ENST00000368207 ATAD2Q6PL18 1390 aa15.17■□□□□ 0.02
PTPRK-203ENST00000368207 ANKLE2Q86XL3 938 aa15.16■□□□□ 0.02
PTPRK-203ENST00000368207 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
PTPRK-203ENST00000368207 IFIT2P09913 472 aaKnown RBP15.16■□□□□ 0.02
PTPRK-203ENST00000368207 NUP153P49790 1475 aaKnown RBP15.16■□□□□ 0.02
PTPRK-203ENST00000368207 DRC7Q8IY82 874 aa15.15■□□□□ 0.02
PTPRK-203ENST00000368207 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
PTPRK-203ENST00000368207 C1orf115Q9H7X2 142 aa15.15■□□□□ 0.02
PTPRK-203ENST00000368207 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
PTPRK-203ENST00000368207 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
PTPRK-203ENST00000368207 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
PTPRK-203ENST00000368207 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.011e-7■■■■□ 21.6
PTPRK-203ENST00000368207 ANO2Q9NQ90 1003 aa15.14■□□□□ 0.01
PTPRK-203ENST00000368207 GOLGA6L6A8MZA4 724 aa15.14■□□□□ 0.01
PTPRK-203ENST00000368207 TMX4Q9H1E5 349 aaPredicted RBP15.14■□□□□ 0.01
PTPRK-203ENST00000368207 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
PTPRK-203ENST00000368207 REC8O95072 547 aa15.13■□□□□ 0.01
PTPRK-203ENST00000368207 PTMSP20962 102 aa15.13■□□□□ 0.01
PTPRK-203ENST00000368207 UBTFL1P0CB47 393 aaPredicted RBP15.13■□□□□ 0.01
PTPRK-203ENST00000368207 FANCIQ9NVI1 1328 aa15.13■□□□□ 0.01
PTPRK-203ENST00000368207 NRDCO43847 1150 aa15.13■□□□□ 0.01
PTPRK-203ENST00000368207 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
PTPRK-203ENST00000368207 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
PTPRK-203ENST00000368207 PLEKHO1Q53GL0 409 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-203ENST00000368207 RAPGEF6Q8TEU7 1601 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 WDR63Q8IWG1 891 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
PTPRK-203ENST00000368207 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
PTPRK-203ENST00000368207 UGGT2Q9NYU1 1516 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 AAMPQ13685 434 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
PTPRK-203ENST00000368207 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
PTPRK-203ENST00000368207 DHX29Q7Z478 1369 aaKnown RBP15.1■□□□□ 0.01
PTPRK-203ENST00000368207 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
PTPRK-203ENST00000368207 PDZRN3Q9UPQ7 1066 aa15.1■□□□□ 0.01
PTPRK-203ENST00000368207 G3V3G9 751 aa15.1■□□□□ 0.01
PTPRK-203ENST00000368207 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
PTPRK-203ENST00000368207 ZNF428Q96B54 188 aa15.1■□□□□ 0.01
PTPRK-203ENST00000368207 RBM33Q96EV2 1170 aaKnown RBP15.1■□□□□ 0.01
PTPRK-203ENST00000368207 NOS1P29475 1434 aa15.1■□□□□ 0.01
PTPRK-203ENST00000368207 SMG6Q86US8 1419 aaKnown RBP15.09■□□□□ 0.01
PTPRK-203ENST00000368207 RUFY2Q8WXA3 655 aa15.09■□□□□ 0.01
PTPRK-203ENST00000368207 DENND4BO75064 1496 aaPredicted RBP15.09■□□□□ 0.01
PTPRK-203ENST00000368207 HDGFL1Q5TGJ6 251 aa15.09■□□□□ 0.01
PTPRK-203ENST00000368207 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
PTPRK-203ENST00000368207 C22orf23Q9BZE7 217 aa15.09■□□□□ 0.01
PTPRK-203ENST00000368207 TMPOP42166 694 aaKnown RBP15.08■□□□□ 0.01
PTPRK-203ENST00000368207 NME9Q86XW9 330 aa15.08■□□□□ 0.01
PTPRK-203ENST00000368207 MSH5O43196 834 aa15.08■□□□□ 0
PTPRK-203ENST00000368207 SURF6O75683 361 aaKnown RBP15.08■□□□□ 0
PTPRK-203ENST00000368207 FCHSD2O94868 740 aa15.07■□□□□ 0
PTPRK-203ENST00000368207 GNAI3P08754 354 aa15.07■□□□□ 0
PTPRK-203ENST00000368207 ZKSCAN1P17029 563 aaPredicted RBP15.07■□□□□ 0
PTPRK-203ENST00000368207 SLFN5Q08AF3 891 aa15.07■□□□□ 0
PTPRK-203ENST00000368207 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
PTPRK-203ENST00000368207 ATF7IPQ6VMQ6 1270 aa15.07■□□□□ 0
PTPRK-203ENST00000368207 DDX49Q9Y6V7 483 aaKnown RBP15.07■□□□□ 0
PTPRK-203ENST00000368207 HSP90AB4PQ58FF6 505 aa15.07■□□□□ 0
PTPRK-203ENST00000368207 NEUROD6Q96NK8 337 aa15.07■□□□□ 0
PTPRK-203ENST00000368207 MAPKBP1O60336 1514 aa15.06■□□□□ 0
PTPRK-203ENST00000368207 ZC3H6P61129 1189 aaKnown RBP15.06■□□□□ 0
PTPRK-203ENST00000368207 DISP3Q9P2K9 1392 aa15.06■□□□□ 0
PTPRK-203ENST00000368207 PLCH2O75038 1416 aa15.06■□□□□ 0
PTPRK-203ENST00000368207 TATP17735 454 aaPredicted RBP15.05■□□□□ 0
PTPRK-203ENST00000368207 EMILIN1Q9Y6C2 1016 aa15.05■□□□□ -0
PTPRK-203ENST00000368207 C14orf93Q9H972 538 aaKnown RBP15.05■□□□□ -0
PTPRK-203ENST00000368207 DCTN1Q14203 1278 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 FAM184AQ8NB25 1140 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 APPP05067 770 aa15.04■□□□□ -0
PTPRK-203ENST00000368207 NFE2L2Q16236 605 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms