RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 JCADQ9P266 1359 aa34.67■■■■□ 3.14
PFDN2-201ENST00000368010 DLC1Q96QB1 1528 aa34.65■■■■□ 3.14
PFDN2-201ENST00000368010 NHSL1Q5SYE7 1610 aa34.63■■■■□ 3.13
PFDN2-201ENST00000368010 PRAM1Q96QH2 718 aa34.62■■■■□ 3.13
PFDN2-201ENST00000368010 SIN3AQ96ST3 1273 aa34.61■■■■□ 3.13
PFDN2-201ENST00000368010 PHF23Q9BUL5 403 aaPredicted RBP34.6■■■■□ 3.13
PFDN2-201ENST00000368010 ORAI2Q96SN7 254 aa34.59■■■■□ 3.13
PFDN2-201ENST00000368010 POGKQ9P215 609 aa34.59■■■■□ 3.13
PFDN2-201ENST00000368010 TRAK1Q9UPV9 953 aa34.59■■■■□ 3.13
PFDN2-201ENST00000368010 NEUROD1Q13562 356 aa34.56■■■■□ 3.12
PFDN2-201ENST00000368010 SAFB2Q14151 953 aaKnown RBP eCLIP34.56■■■■□ 3.12
PFDN2-201ENST00000368010 DDX17Q92841 729 aaKnown RBP34.54■■■■□ 3.12
PFDN2-201ENST00000368010 L3MBTL2Q969R5 705 aa34.54■■■■□ 3.12
PFDN2-201ENST00000368010 KIAA1210Q9ULL0 1709 aa34.54■■■■□ 3.12
PFDN2-201ENST00000368010 ESCO1Q5FWF5 840 aa34.53■■■■□ 3.12
PFDN2-201ENST00000368010 FMN2Q9NZ56 1722 aa34.52■■■■□ 3.12
PFDN2-201ENST00000368010 NUTM2FA1L443 756 aa34.52■■■■□ 3.12
PFDN2-201ENST00000368010 SHPRHQ149N8 1683 aa34.51■■■■□ 3.12
PFDN2-201ENST00000368010 ILDR2Q71H61 639 aa34.51■■■■□ 3.12
PFDN2-201ENST00000368010 SPATA31A6Q5VVP1 1343 aa34.51■■■■□ 3.11
PFDN2-201ENST00000368010 LRRC59Q96AG4 307 aaKnown RBP34.5■■■■□ 3.11
PFDN2-201ENST00000368010 ADGRB2O60241 1585 aa34.46■■■■□ 3.11
PFDN2-201ENST00000368010 SOS2Q07890 1332 aaPredicted RBP34.45■■■■□ 3.11
PFDN2-201ENST00000368010 NPHP3Q7Z494 1330 aa34.44■■■■□ 3.1
PFDN2-201ENST00000368010 ARHGEF28Q8N1W1 1705 aaKnown RBP34.44■■■■□ 3.1
PFDN2-201ENST00000368010 MINK1Q8N4C8 1332 aaPredicted RBP34.42■■■■□ 3.1
PFDN2-201ENST00000368010 NBPF1Q3BBV0 1214 aa34.42■■■■□ 3.1
PFDN2-201ENST00000368010 HIRIP3Q9BW71 556 aaPredicted RBP34.4■■■■□ 3.1
PFDN2-201ENST00000368010 LRP6O75581 1613 aa34.4■■■■□ 3.1
PFDN2-201ENST00000368010 PNPLA6Q8IY17 1366 aa34.39■■■■□ 3.1
PFDN2-201ENST00000368010 FOXO3O43524 673 aa34.39■■■■□ 3.1
PFDN2-201ENST00000368010 KIF1AQ12756 1690 aa34.38■■■■□ 3.09
PFDN2-201ENST00000368010 ANKARQ7Z5J8 1434 aa34.38■■■■□ 3.09
PFDN2-201ENST00000368010 EIF3AQ14152 1382 aaKnown RBP34.37■■■■□ 3.09
PFDN2-201ENST00000368010 PXDNQ92626 1479 aa34.35■■■■□ 3.09
PFDN2-201ENST00000368010 MEX3CQ5U5Q3 659 aaKnown RBP34.35■■■■□ 3.09
PFDN2-201ENST00000368010 NUTM2BA6NNL0 878 aaPredicted RBP34.34■■■■□ 3.09
PFDN2-201ENST00000368010 NUTM2EB1AL46 878 aaPredicted RBP34.34■■■■□ 3.09
PFDN2-201ENST00000368010 NUTM2AQ8IVF1 878 aaPredicted RBP34.34■■■■□ 3.09
PFDN2-201ENST00000368010 RGS17Q9UGC6 210 aaPredicted RBP34.34■■■■□ 3.09
PFDN2-201ENST00000368010 WASLO00401 505 aaPredicted RBP34.33■■■■□ 3.09
PFDN2-201ENST00000368010 PHF8Q9UPP1 1060 aa34.33■■■■□ 3.09
PFDN2-201ENST00000368010 TONSLQ96HA7 1378 aa34.33■■■■□ 3.09
PFDN2-201ENST00000368010 TRPM1Q7Z4N2 1603 aa34.31■■■■□ 3.08
PFDN2-201ENST00000368010 XPCQ01831 940 aaPredicted RBP34.31■■■■□ 3.08
PFDN2-201ENST00000368010 TULP4Q9NRJ4 1543 aa34.3■■■■□ 3.08
PFDN2-201ENST00000368010 USP32Q8NFA0 1604 aa34.3■■■■□ 3.08
PFDN2-201ENST00000368010 RGPD8O14715 1765 aaPredicted RBP34.3■■■■□ 3.08
PFDN2-201ENST00000368010 ROCK2O75116 1388 aaKnown RBP34.25■■■■□ 3.07
PFDN2-201ENST00000368010 PCGF6Q9BYE7 350 aa34.25■■■■□ 3.07
PFDN2-201ENST00000368010 PRR36Q9H6K5 1346 aa34.25■■■■□ 3.07
PFDN2-201ENST00000368010 CENPJQ9HC77 1338 aaPredicted RBP34.24■■■■□ 3.07
PFDN2-201ENST00000368010 KRT28Q7Z3Y7 464 aa34.23■■■■□ 3.07
PFDN2-201ENST00000368010 COL22A1Q8NFW1 1626 aaPredicted RBP34.22■■■■□ 3.07
PFDN2-201ENST00000368010 PMFBP1Q8TBY8 1022 aa34.22■■■■□ 3.07
PFDN2-201ENST00000368010 NBPF8Q3BBV2 869 aa34.21■■■■□ 3.07
PFDN2-201ENST00000368010 PSME1Q06323 249 aa34.2■■■■□ 3.07
PFDN2-201ENST00000368010 SOCS7O14512 581 aa34.19■■■■□ 3.06
PFDN2-201ENST00000368010 POTEAQ6S8J7 498 aa34.19■■■■□ 3.06
PFDN2-201ENST00000368010 CDK19Q9BWU1 502 aa34.19■■■■□ 3.06
PFDN2-201ENST00000368010 SPATA31A3Q5VYP0 1347 aa34.19■■■■□ 3.06
PFDN2-201ENST00000368010 ATP7BP35670 1465 aa34.18■■■■□ 3.06
PFDN2-201ENST00000368010 ZNF772Q68DY9 489 aaPredicted RBP34.16■■■■□ 3.06
PFDN2-201ENST00000368010 NUDT16Q96DE0 195 aaKnown RBP34.16■■■■□ 3.06
PFDN2-201ENST00000368010 GPRASP1Q5JY77 1395 aa34.15■■■■□ 3.06
PFDN2-201ENST00000368010 ADAMTS2O95450 1211 aa34.15■■■■□ 3.06
PFDN2-201ENST00000368010 QRICH2Q9H0J4 1663 aa34.15■■■■□ 3.06
PFDN2-201ENST00000368010 TNS3Q68CZ2 1445 aa34.14■■■■□ 3.06
PFDN2-201ENST00000368010 C8orf37Q96NL8 207 aa34.14■■■■□ 3.06
PFDN2-201ENST00000368010 ITSN1Q15811 1721 aa34.13■■■■□ 3.05
PFDN2-201ENST00000368010 SBNO1A3KN83 1393 aa34.13■■■■□ 3.05
PFDN2-201ENST00000368010 RALGAPBQ86X10 1494 aa34.11■■■■□ 3.05
PFDN2-201ENST00000368010 AFF2P51816 1311 aa34.1■■■■□ 3.05
PFDN2-201ENST00000368010 NGDNQ8NEJ9 315 aaKnown RBP34.1■■■■□ 3.05
PFDN2-201ENST00000368010 SRPK2P78362 688 aaKnown RBP34.08■■■■□ 3.05
PFDN2-201ENST00000368010 CCDC61Q9Y6R9 512 aa34.08■■■■□ 3.05
PFDN2-201ENST00000368010 CARD11Q9BXL7 1154 aa34.07■■■■□ 3.04
PFDN2-201ENST00000368010 ARHGEF10O15013 1369 aa34.07■■■■□ 3.04
PFDN2-201ENST00000368010 NGLY1Q96IV0 654 aa34.06■■■■□ 3.04
PFDN2-201ENST00000368010 TOPAZ1Q8N9V7 1692 aa34.06■■■■□ 3.04
PFDN2-201ENST00000368010 CLSPNQ9HAW4 1339 aa34.05■■■■□ 3.04
PFDN2-201ENST00000368010 LMOD2Q6P5Q4 547 aa34.05■■■■□ 3.04
PFDN2-201ENST00000368010 TRPM3Q9HCF6 1732 aaPredicted RBP34.02■■■■□ 3.04
PFDN2-201ENST00000368010 CABP2Q9NPB3 220 aa34.02■■■■□ 3.04
PFDN2-201ENST00000368010 EVC2Q86UK5 1308 aa34.01■■■■□ 3.03
PFDN2-201ENST00000368010 PLEKHG3A1L390 1219 aa33.99■■■■□ 3.03
PFDN2-201ENST00000368010 HAP1P54257 671 aaPredicted RBP33.99■■■■□ 3.03
PFDN2-201ENST00000368010 POLR3AO14802 1390 aaPredicted RBP33.98■■■■□ 3.03
PFDN2-201ENST00000368010 PPIP5K1Q6PFW1 1433 aa33.97■■■■□ 3.03
PFDN2-201ENST00000368010 ACEP12821 1306 aa33.97■■■■□ 3.03
PFDN2-201ENST00000368010 MARF1Q9Y4F3 1742 aaKnown RBP33.96■■■■□ 3.03
PFDN2-201ENST00000368010 PAK3O75914 559 aaPredicted RBP33.95■■■■□ 3.03
PFDN2-201ENST00000368010 PLEKHG5O94827 1062 aa33.95■■■■□ 3.03
PFDN2-201ENST00000368010 FNBP4Q8N3X1 1017 aaPredicted RBP33.95■■■■□ 3.03
PFDN2-201ENST00000368010 CABLES1Q8TDN4 633 aa33.95■■■■□ 3.03
PFDN2-201ENST00000368010 ALS2Q96Q42 1657 aa33.95■■■■□ 3.03
PFDN2-201ENST00000368010 USP21Q9UK80 565 aa33.94■■■■□ 3.02
PFDN2-201ENST00000368010 RXRBP28702 533 aa33.93■■■■□ 3.02
PFDN2-201ENST00000368010 SBNO2Q9Y2G9 1366 aa33.93■■■■□ 3.02
PFDN2-201ENST00000368010 TIMELESSQ9UNS1 1208 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms