RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
MRPL55-216ENST00000366744 ITSN1Q15811 1721 aa13.48□□□□□ -0.25
MRPL55-216ENST00000366744 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
MRPL55-216ENST00000366744 ADGRB2O60241 1585 aa13.48□□□□□ -0.25
MRPL55-216ENST00000366744 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-216ENST00000366744 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
MRPL55-216ENST00000366744 C1orf167Q5SNV9 1468 aa13.47□□□□□ -0.25
MRPL55-216ENST00000366744 JCADQ9P266 1359 aa13.46□□□□□ -0.25
MRPL55-216ENST00000366744 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
MRPL55-216ENST00000366744 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
MRPL55-216ENST00000366744 POGKQ9P215 609 aa13.44□□□□□ -0.26
MRPL55-216ENST00000366744 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
MRPL55-216ENST00000366744 QRICH2Q9H0J4 1663 aa13.43□□□□□ -0.26
MRPL55-216ENST00000366744 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
MRPL55-216ENST00000366744 PLEKHH1Q9ULM0 1364 aa13.42□□□□□ -0.26
MRPL55-216ENST00000366744 SIRT1Q96EB6 747 aa13.41□□□□□ -0.26
MRPL55-216ENST00000366744 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
MRPL55-216ENST00000366744 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
MRPL55-216ENST00000366744 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
MRPL55-216ENST00000366744 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
MRPL55-216ENST00000366744 TONSLQ96HA7 1378 aa13.4□□□□□ -0.26
MRPL55-216ENST00000366744 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
MRPL55-216ENST00000366744 MEX3CQ5U5Q3 659 aaKnown RBP13.39□□□□□ -0.27
MRPL55-216ENST00000366744 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
MRPL55-216ENST00000366744 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
MRPL55-216ENST00000366744 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
MRPL55-216ENST00000366744 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
MRPL55-216ENST00000366744 MARF1Q9Y4F3 1742 aaKnown RBP13.38□□□□□ -0.27
MRPL55-216ENST00000366744 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
MRPL55-216ENST00000366744 COL22A1Q8NFW1 1626 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-216ENST00000366744 LRRC59Q96AG4 307 aaKnown RBP13.37□□□□□ -0.27
MRPL55-216ENST00000366744 NUTM2FA1L443 756 aa13.36□□□□□ -0.27
MRPL55-216ENST00000366744 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
MRPL55-216ENST00000366744 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
MRPL55-216ENST00000366744 MINK1Q8N4C8 1332 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-216ENST00000366744 TOPAZ1Q8N9V7 1692 aa13.35□□□□□ -0.27
MRPL55-216ENST00000366744 L3MBTL2Q969R5 705 aa13.35□□□□□ -0.27
MRPL55-216ENST00000366744 PXDNQ92626 1479 aa13.35□□□□□ -0.27
MRPL55-216ENST00000366744 ROCK2O75116 1388 aaKnown RBP13.34□□□□□ -0.27
MRPL55-216ENST00000366744 LRP6O75581 1613 aa13.34□□□□□ -0.27
MRPL55-216ENST00000366744 PNPLA6Q8IY17 1366 aa13.33□□□□□ -0.27
MRPL55-216ENST00000366744 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-216ENST00000366744 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
MRPL55-216ENST00000366744 ABCA3Q99758 1704 aa13.32□□□□□ -0.28
MRPL55-216ENST00000366744 SOS2Q07890 1332 aaPredicted RBP13.32□□□□□ -0.28
MRPL55-216ENST00000366744 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-216ENST00000366744 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-216ENST00000366744 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-216ENST00000366744 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
MRPL55-216ENST00000366744 CENPJQ9HC77 1338 aaPredicted RBP13.31□□□□□ -0.28
MRPL55-216ENST00000366744 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-216ENST00000366744 ATP7BP35670 1465 aa13.3□□□□□ -0.28
MRPL55-216ENST00000366744 RALGAPBQ86X10 1494 aa13.3□□□□□ -0.28
MRPL55-216ENST00000366744 FOXO3O43524 673 aa13.3□□□□□ -0.28
MRPL55-216ENST00000366744 TNS3Q68CZ2 1445 aa13.3□□□□□ -0.28
MRPL55-216ENST00000366744 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-216ENST00000366744 PSME1Q06323 249 aa13.29□□□□□ -0.28
MRPL55-216ENST00000366744 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
MRPL55-216ENST00000366744 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
MRPL55-216ENST00000366744 XPCQ01831 940 aaPredicted RBP13.28□□□□□ -0.28
MRPL55-216ENST00000366744 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
MRPL55-216ENST00000366744 ALS2Q96Q42 1657 aa13.28□□□□□ -0.28
MRPL55-216ENST00000366744 ARHGEF10O15013 1369 aa13.27□□□□□ -0.29
MRPL55-216ENST00000366744 HAP1P54257 671 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-216ENST00000366744 ZNF772Q68DY9 489 aaPredicted RBP13.26□□□□□ -0.29
MRPL55-216ENST00000366744 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
MRPL55-216ENST00000366744 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
MRPL55-216ENST00000366744 PLCH1Q4KWH8 1693 aa13.25□□□□□ -0.29
MRPL55-216ENST00000366744 SBNO1A3KN83 1393 aa13.25□□□□□ -0.29
MRPL55-216ENST00000366744 CLSPNQ9HAW4 1339 aa13.25□□□□□ -0.29
MRPL55-216ENST00000366744 SRPK2P78362 688 aaKnown RBP13.25□□□□□ -0.29
MRPL55-216ENST00000366744 KRT28Q7Z3Y7 464 aa13.25□□□□□ -0.29
MRPL55-216ENST00000366744 NGDNQ8NEJ9 315 aaKnown RBP13.25□□□□□ -0.29
MRPL55-216ENST00000366744 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
MRPL55-216ENST00000366744 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
MRPL55-216ENST00000366744 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
MRPL55-216ENST00000366744 CARD11Q9BXL7 1154 aa13.24□□□□□ -0.29
MRPL55-216ENST00000366744 SPATA31A3Q5VYP0 1347 aa13.23□□□□□ -0.29
MRPL55-216ENST00000366744 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
MRPL55-216ENST00000366744 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
MRPL55-216ENST00000366744 ADAMTS2O95450 1211 aa13.23□□□□□ -0.29
MRPL55-216ENST00000366744 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
MRPL55-216ENST00000366744 PHRF1Q9P1Y6 1649 aaKnown RBP13.23□□□□□ -0.29
MRPL55-216ENST00000366744 PPIP5K1Q6PFW1 1433 aa13.22□□□□□ -0.29
MRPL55-216ENST00000366744 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
MRPL55-216ENST00000366744 CRYBG1Q9Y4K1 1723 aa13.22□□□□□ -0.29
MRPL55-216ENST00000366744 AFF2P51816 1311 aa13.22□□□□□ -0.29
MRPL55-216ENST00000366744 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
MRPL55-216ENST00000366744 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
MRPL55-216ENST00000366744 SOCS7O14512 581 aa13.21□□□□□ -0.29
MRPL55-216ENST00000366744 NGLY1Q96IV0 654 aa13.21□□□□□ -0.29
MRPL55-216ENST00000366744 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-216ENST00000366744 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-216ENST00000366744 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
MRPL55-216ENST00000366744 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
MRPL55-216ENST00000366744 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
MRPL55-216ENST00000366744 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
MRPL55-216ENST00000366744 RGS17Q9UGC6 210 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-216ENST00000366744 MON2Q7Z3U7 1717 aa13.19□□□□□ -0.3
MRPL55-216ENST00000366744 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms