RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 CDC42BPGQ6DT37 1551 aa22.49■■□□□ 1.19
MRPL55-215ENST00000366742 TRAK1Q9UPV9 953 aa22.48■■□□□ 1.19
MRPL55-215ENST00000366742 KIAA1210Q9ULL0 1709 aa22.47■■□□□ 1.19
MRPL55-215ENST00000366742 NBPF1Q3BBV0 1214 aa22.46■■□□□ 1.19
MRPL55-215ENST00000366742 AHDC1Q5TGY3 1603 aaPredicted RBP22.46■■□□□ 1.19
MRPL55-215ENST00000366742 PHLPP1O60346 1717 aa22.43■■□□□ 1.18
MRPL55-215ENST00000366742 SAFB2Q14151 953 aaKnown RBP eCLIP22.43■■□□□ 1.18
MRPL55-215ENST00000366742 ORAI2Q96SN7 254 aa22.43■■□□□ 1.18
MRPL55-215ENST00000366742 POGKQ9P215 609 aa22.43■■□□□ 1.18
MRPL55-215ENST00000366742 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
MRPL55-215ENST00000366742 NHSL1Q5SYE7 1610 aa22.39■■□□□ 1.17
MRPL55-215ENST00000366742 ARHGEF28Q8N1W1 1705 aaKnown RBP22.38■■□□□ 1.17
MRPL55-215ENST00000366742 FMN2Q9NZ56 1722 aa22.38■■□□□ 1.17
MRPL55-215ENST00000366742 NBPF8Q3BBV2 869 aa22.38■■□□□ 1.17
MRPL55-215ENST00000366742 DDX17Q92841 729 aaKnown RBP22.38■■□□□ 1.17
MRPL55-215ENST00000366742 NUTM2FA1L443 756 aa22.37■■□□□ 1.17
MRPL55-215ENST00000366742 ADGRB2O60241 1585 aa22.37■■□□□ 1.17
MRPL55-215ENST00000366742 MED1Q15648 1581 aaPredicted RBP22.37■■□□□ 1.17
MRPL55-215ENST00000366742 TONSLQ96HA7 1378 aa22.37■■□□□ 1.17
MRPL55-215ENST00000366742 JCADQ9P266 1359 aa22.37■■□□□ 1.17
MRPL55-215ENST00000366742 TRPM1Q7Z4N2 1603 aa22.35■■□□□ 1.17
MRPL55-215ENST00000366742 ESCO1Q5FWF5 840 aa22.35■■□□□ 1.17
MRPL55-215ENST00000366742 DISP3Q9P2K9 1392 aa22.35■■□□□ 1.17
MRPL55-215ENST00000366742 MINK1Q8N4C8 1332 aaPredicted RBP22.34■■□□□ 1.17
MRPL55-215ENST00000366742 HIRIP3Q9BW71 556 aaPredicted RBP22.34■■□□□ 1.17
MRPL55-215ENST00000366742 SOS2Q07890 1332 aaPredicted RBP22.32■■□□□ 1.16
MRPL55-215ENST00000366742 WASLO00401 505 aaPredicted RBP22.31■■□□□ 1.16
MRPL55-215ENST00000366742 CLSPNQ9HAW4 1339 aa22.31■■□□□ 1.16
MRPL55-215ENST00000366742 ROCK2O75116 1388 aaKnown RBP22.29■■□□□ 1.16
MRPL55-215ENST00000366742 GPRASP1Q5JY77 1395 aa22.29■■□□□ 1.16
MRPL55-215ENST00000366742 LRRC59Q96AG4 307 aaKnown RBP22.29■■□□□ 1.16
MRPL55-215ENST00000366742 ANKARQ7Z5J8 1434 aa22.29■■□□□ 1.16
MRPL55-215ENST00000366742 USP32Q8NFA0 1604 aa22.28■■□□□ 1.16
MRPL55-215ENST00000366742 FOXO3O43524 673 aa22.28■■□□□ 1.16
MRPL55-215ENST00000366742 NPHP3Q7Z494 1330 aa22.28■■□□□ 1.16
MRPL55-215ENST00000366742 PRR36Q9H6K5 1346 aa22.28■■□□□ 1.16
MRPL55-215ENST00000366742 SHPRHQ149N8 1683 aa22.27■■□□□ 1.16
MRPL55-215ENST00000366742 RGPD8O14715 1765 aaPredicted RBP22.26■■□□□ 1.15
MRPL55-215ENST00000366742 PHF8Q9UPP1 1060 aa22.26■■□□□ 1.15
MRPL55-215ENST00000366742 PXDNQ92626 1479 aa22.26■■□□□ 1.15
MRPL55-215ENST00000366742 SPATA31A6Q5VVP1 1343 aa22.26■■□□□ 1.15
MRPL55-215ENST00000366742 CENPJQ9HC77 1338 aaPredicted RBP22.26■■□□□ 1.15
MRPL55-215ENST00000366742 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
MRPL55-215ENST00000366742 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
MRPL55-215ENST00000366742 PNPLA6Q8IY17 1366 aa22.25■■□□□ 1.15
MRPL55-215ENST00000366742 KIF1AQ12756 1690 aa22.24■■□□□ 1.15
MRPL55-215ENST00000366742 RALGAPBQ86X10 1494 aa22.24■■□□□ 1.15
MRPL55-215ENST00000366742 LRP6O75581 1613 aa22.23■■□□□ 1.15
MRPL55-215ENST00000366742 XPCQ01831 940 aaPredicted RBP22.22■■□□□ 1.15
MRPL55-215ENST00000366742 CDK19Q9BWU1 502 aa22.22■■□□□ 1.15
MRPL55-215ENST00000366742 ATP7BP35670 1465 aa22.2■■□□□ 1.14
MRPL55-215ENST00000366742 PMFBP1Q8TBY8 1022 aa22.19■■□□□ 1.14
MRPL55-215ENST00000366742 NUDT16Q96DE0 195 aaKnown RBP22.19■■□□□ 1.14
MRPL55-215ENST00000366742 CARD11Q9BXL7 1154 aa22.19■■□□□ 1.14
MRPL55-215ENST00000366742 RGS17Q9UGC6 210 aaPredicted RBP22.19■■□□□ 1.14
MRPL55-215ENST00000366742 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
MRPL55-215ENST00000366742 QRICH2Q9H0J4 1663 aa22.18■■□□□ 1.14
MRPL55-215ENST00000366742 ILDR2Q71H61 639 aa22.18■■□□□ 1.14
MRPL55-215ENST00000366742 KRT28Q7Z3Y7 464 aa22.18■■□□□ 1.14
MRPL55-215ENST00000366742 CCER1Q8TC90 406 aaPredicted RBP22.18■■□□□ 1.14
MRPL55-215ENST00000366742 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
MRPL55-215ENST00000366742 SPATA31A3Q5VYP0 1347 aa22.15■■□□□ 1.14
MRPL55-215ENST00000366742 NUTM2BA6NNL0 878 aaPredicted RBP22.15■■□□□ 1.14
MRPL55-215ENST00000366742 NUTM2EB1AL46 878 aaPredicted RBP22.15■■□□□ 1.14
MRPL55-215ENST00000366742 NUTM2AQ8IVF1 878 aaPredicted RBP22.15■■□□□ 1.14
MRPL55-215ENST00000366742 CCDC61Q9Y6R9 512 aa22.14■■□□□ 1.13
MRPL55-215ENST00000366742 COL22A1Q8NFW1 1626 aaPredicted RBP22.13■■□□□ 1.13
MRPL55-215ENST00000366742 PSME1Q06323 249 aa22.13■■□□□ 1.13
MRPL55-215ENST00000366742 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
MRPL55-215ENST00000366742 CABP2Q9NPB3 220 aa22.12■■□□□ 1.13
MRPL55-215ENST00000366742 TOPAZ1Q8N9V7 1692 aa22.11■■□□□ 1.13
MRPL55-215ENST00000366742 PLEKHG3A1L390 1219 aa22.11■■□□□ 1.13
MRPL55-215ENST00000366742 SRPK2P78362 688 aaKnown RBP22.11■■□□□ 1.13
MRPL55-215ENST00000366742 SBNO2Q9Y2G9 1366 aa22.11■■□□□ 1.13
MRPL55-215ENST00000366742 ITSN1Q15811 1721 aa22.1■■□□□ 1.13
MRPL55-215ENST00000366742 MEX3CQ5U5Q3 659 aaKnown RBP22.1■■□□□ 1.13
MRPL55-215ENST00000366742 TNS3Q68CZ2 1445 aa22.1■■□□□ 1.13
MRPL55-215ENST00000366742 NGDNQ8NEJ9 315 aaKnown RBP22.1■■□□□ 1.13
MRPL55-215ENST00000366742 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
MRPL55-215ENST00000366742 POLR3AO14802 1390 aaPredicted RBP22.09■■□□□ 1.13
MRPL55-215ENST00000366742 TRPM3Q9HCF6 1732 aaPredicted RBP22.07■■□□□ 1.12
MRPL55-215ENST00000366742 ACEP12821 1306 aa22.06■■□□□ 1.12
MRPL55-215ENST00000366742 POTEAQ6S8J7 498 aa22.06■■□□□ 1.12
MRPL55-215ENST00000366742 ADAMTS2O95450 1211 aa22.05■■□□□ 1.12
MRPL55-215ENST00000366742 PPIP5K1Q6PFW1 1433 aa22.05■■□□□ 1.12
MRPL55-215ENST00000366742 ARHGEF10O15013 1369 aa22.04■■□□□ 1.12
MRPL55-215ENST00000366742 TESK2Q96S53 571 aa22.03■■□□□ 1.12
MRPL55-215ENST00000366742 CABP1Q9NZU7 370 aa22.03■■□□□ 1.12
MRPL55-215ENST00000366742 ST20-MTHFSA0A0A6YYL1 179 aa22.02■■□□□ 1.12
MRPL55-215ENST00000366742 C8orf37Q96NL8 207 aa22.02■■□□□ 1.12
MRPL55-215ENST00000366742 ALS2Q96Q42 1657 aa22.01■■□□□ 1.11
MRPL55-215ENST00000366742 LMOD2Q6P5Q4 547 aa22.01■■□□□ 1.11
MRPL55-215ENST00000366742 AFF2P51816 1311 aa22.01■■□□□ 1.11
MRPL55-215ENST00000366742 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
MRPL55-215ENST00000366742 CABLES1Q8TDN4 633 aa22■■□□□ 1.11
MRPL55-215ENST00000366742 USP47Q96K76 1375 aa21.99■■□□□ 1.11
MRPL55-215ENST00000366742 ATAD2Q6PL18 1390 aa21.99■■□□□ 1.11
MRPL55-215ENST00000366742 PAK3O75914 559 aaPredicted RBP21.98■■□□□ 1.11
MRPL55-215ENST00000366742 NGLY1Q96IV0 654 aa21.98■■□□□ 1.11
MRPL55-215ENST00000366742 FNBP4Q8N3X1 1017 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms