RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 HLA-CQ95604 372 aa7.09□□□□□ -1.27
RNU6-28P-201ENST00000362378 GDPD2Q9HCC8 539 aa7.09□□□□□ -1.27
RNU6-28P-201ENST00000362378 PRM3Q9NNZ6 103 aa7.09□□□□□ -1.27
RNU6-28P-201ENST00000362378 CFHP08603 1231 aa7.08□□□□□ -1.28
RNU6-28P-201ENST00000362378 GUCA2AQ02747 115 aa7.08□□□□□ -1.28
RNU6-28P-201ENST00000362378 FUT2Q10981 343 aa7.08□□□□□ -1.28
RNU6-28P-201ENST00000362378 MTMR2Q13614 643 aa7.08□□□□□ -1.28
RNU6-28P-201ENST00000362378 ZFRQ96KR1 1074 aaKnown RBP7.08□□□□□ -1.28
RNU6-28P-201ENST00000362378 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
RNU6-28P-201ENST00000362378 ATP6V1AP38606 617 aa7.07□□□□□ -1.28
RNU6-28P-201ENST00000362378 WWC1Q8IX03 1113 aa7.07□□□□□ -1.28
RNU6-28P-201ENST00000362378 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
RNU6-28P-201ENST00000362378 GJD4Q96KN9 370 aaPredicted RBP7.07□□□□□ -1.28
RNU6-28P-201ENST00000362378 SERPINA10Q9UK55 444 aa7.07□□□□□ -1.28
RNU6-28P-201ENST00000362378 TBC1D2BQ9UPU7 963 aa7.06□□□□□ -1.28
RNU6-28P-201ENST00000362378 CTDSPL2Q05D32 466 aa7.05□□□□□ -1.28
RNU6-28P-201ENST00000362378 KMT5BQ4FZB7 885 aa7.05□□□□□ -1.28
RNU6-28P-201ENST00000362378 ADGRD1Q6QNK2 874 aa7.05□□□□□ -1.28
RNU6-28P-201ENST00000362378 MRPL50Q8N5N7 158 aaKnown RBP7.05□□□□□ -1.28
RNU6-28P-201ENST00000362378 HELBQ8NG08 1087 aaPredicted RBP7.05□□□□□ -1.28
RNU6-28P-201ENST00000362378 CFAP99D6REC4 459 aa7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 C6orf229H3BNL8 230 aa7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 HRO43593 1189 aa7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 ACTN4O43707 911 aaKnown RBP7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 ABL2P42684 1182 aa7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 LSM11P83369 360 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 CCDC97Q96F63 343 aaPredicted RBP7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 NDUFB9Q9Y6M9 179 aa7.04□□□□□ -1.28
RNU6-28P-201ENST00000362378 MORN1Q5T089 497 aa7.03□□□□□ -1.28
RNU6-28P-201ENST00000362378 LRCH3Q96II8 777 aa7.03□□□□□ -1.28
RNU6-28P-201ENST00000362378 TRIM34Q9BYJ4 488 aa7.03□□□□□ -1.28
RNU6-28P-201ENST00000362378 HMX1Q9NP08 348 aaPredicted RBP7.03□□□□□ -1.28
RNU6-28P-201ENST00000362378 RNF40O75150 1001 aa7.02□□□□□ -1.29
RNU6-28P-201ENST00000362378 IRF5Q13568 498 aa7.02□□□□□ -1.29
RNU6-28P-201ENST00000362378 PRR14Q9BWN1 585 aa7.02□□□□□ -1.29
RNU6-28P-201ENST00000362378 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.02□□□□□ -1.29
RNU6-28P-201ENST00000362378 PLA2G2EQ9NZK7 142 aa7.02□□□□□ -1.29
RNU6-28P-201ENST00000362378 GPR37L1O60883 481 aa7.01□□□□□ -1.29
RNU6-28P-201ENST00000362378 RETREG3Q86VR2 466 aa7.01□□□□□ -1.29
RNU6-28P-201ENST00000362378 LRRN4Q8WUT4 740 aa7.01□□□□□ -1.29
RNU6-28P-201ENST00000362378 SYMPKQ92797 1274 aaKnown RBP7.01□□□□□ -1.29
RNU6-28P-201ENST00000362378 Q3C1V9 767 aa7□□□□□ -1.29
RNU6-28P-201ENST00000362378 DESI1Q6ICB0 168 aa7□□□□□ -1.29
RNU6-28P-201ENST00000362378 PRR7Q8TB68 274 aa7□□□□□ -1.29
RNU6-28P-201ENST00000362378 SLC27A5Q9Y2P5 690 aa7□□□□□ -1.29
RNU6-28P-201ENST00000362378 POM121CA8CG34 1229 aa6.99□□□□□ -1.29
RNU6-28P-201ENST00000362378 WASHC4Q2M389 1173 aa6.99□□□□□ -1.29
RNU6-28P-201ENST00000362378 ANKK1Q8NFD2 765 aa6.99□□□□□ -1.29
RNU6-28P-201ENST00000362378 SALL2Q9Y467 1007 aaPredicted RBP6.99□□□□□ -1.29
RNU6-28P-201ENST00000362378 SOWAHBA6NEL2 793 aa6.98□□□□□ -1.29
RNU6-28P-201ENST00000362378 PUS10Q3MIT2 529 aaKnown RBP6.98□□□□□ -1.29
RNU6-28P-201ENST00000362378 TSC1Q92574 1164 aa6.98□□□□□ -1.29
RNU6-28P-201ENST00000362378 GLMNQ92990 594 aa6.98□□□□□ -1.29
RNU6-28P-201ENST00000362378 CALR3Q96L12 384 aaKnown RBP6.98□□□□□ -1.29
RNU6-28P-201ENST00000362378 PPP4CP60510 307 aa6.97□□□□□ -1.29
RNU6-28P-201ENST00000362378 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
RNU6-28P-201ENST00000362378 GOLGA8CPA6NN73 597 aa6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 PER1O15534 1290 aaPredicted RBP6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 BRICD5Q6PL45 260 aa6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 EPS8L1Q8TE68 723 aa6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 STAC3Q96MF2 364 aa6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 HPS5Q9UPZ3 1129 aa6.96□□□□□ -1.3
RNU6-28P-201ENST00000362378 APLP1P51693 650 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 NR6A1Q15406 480 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 HDGFL1Q5TGJ6 251 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 BLOC1S3Q6QNY0 202 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 RNF19BQ6ZMZ0 732 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 ANKRD13DQ6ZTN6 518 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
RNU6-28P-201ENST00000362378 PPP1R15AO75807 674 aaPredicted RBP6.94□□□□□ -1.3
RNU6-28P-201ENST00000362378 PDIA4P13667 645 aaKnown RBP6.94□□□□□ -1.3
RNU6-28P-201ENST00000362378 BCAMP50895 628 aa6.94□□□□□ -1.3
RNU6-28P-201ENST00000362378 SCUBE3Q8IX30 993 aa6.94□□□□□ -1.3
RNU6-28P-201ENST00000362378 THAP11Q96EK4 314 aa6.94□□□□□ -1.3
RNU6-28P-201ENST00000362378 NR1I2O75469 434 aa6.93□□□□□ -1.3
RNU6-28P-201ENST00000362378 SOX11P35716 441 aa6.93□□□□□ -1.3
RNU6-28P-201ENST00000362378 VAC14Q08AM6 782 aa6.93□□□□□ -1.3
RNU6-28P-201ENST00000362378 WNT2BQ93097 391 aa6.93□□□□□ -1.3
RNU6-28P-201ENST00000362378 ALG2Q9H553 416 aa6.93□□□□□ -1.3
RNU6-28P-201ENST00000362378 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
RNU6-28P-201ENST00000362378 PCDHB3Q9Y5E6 796 aa6.92□□□□□ -1.3
RNU6-28P-201ENST00000362378 TRIM26Q12899 539 aaPredicted RBP6.91□□□□□ -1.3
RNU6-28P-201ENST00000362378 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
RNU6-28P-201ENST00000362378 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
RNU6-28P-201ENST00000362378 F12P00748 615 aaPredicted RBP6.9□□□□□ -1.3
RNU6-28P-201ENST00000362378 JUNDP17535 347 aa6.9□□□□□ -1.3
RNU6-28P-201ENST00000362378 IRX2Q9BZI1 471 aaPredicted RBP6.9□□□□□ -1.3
RNU6-28P-201ENST00000362378 PTPRNQ16849 979 aa6.89□□□□□ -1.31
RNU6-28P-201ENST00000362378 MSS51Q4VC12 460 aa6.89□□□□□ -1.31
RNU6-28P-201ENST00000362378 WBP1LQ9NX94 342 aa6.89□□□□□ -1.31
RNU6-28P-201ENST00000362378 ZC3H4Q9UPT8 1303 aaKnown RBP6.88□□□□□ -1.31
RNU6-28P-201ENST00000362378 RGS20O76081 388 aa6.88□□□□□ -1.31
RNU6-28P-201ENST00000362378 CFAP70Q5T0N1 1121 aa6.88□□□□□ -1.31
RNU6-28P-201ENST00000362378 THSD4Q6ZMP0 1018 aa6.88□□□□□ -1.31
RNU6-28P-201ENST00000362378 PPP1R12CQ9BZL4 782 aa6.88□□□□□ -1.31
RNU6-28P-201ENST00000362378 PODXL2Q9NZ53 605 aa6.88□□□□□ -1.31
RNU6-28P-201ENST00000362378 ACIN1Q9UKV3 1341 aaKnown RBP6.87□□□□□ -1.31
RNU6-28P-201ENST00000362378 SRPK2P78362 688 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms