RNA–Protein interactions for RNA: ENST00000361971.9

PLXNB3-201, Transcript of plexin B3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PLXNB3, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-201ENST00000361971 REC8O95072 547 aa20.06■□□□□ 0.8
PLXNB3-201ENST00000361971 SF3B2Q13435 895 aaKnown RBP20.06■□□□□ 0.8
PLXNB3-201ENST00000361971 ATP6V1DQ9Y5K8 247 aa20.05■□□□□ 0.8
PLXNB3-201ENST00000361971 KIF6Q6ZMV9 814 aa20.05■□□□□ 0.8
PLXNB3-201ENST00000361971 PCMTD1Q96MG8 357 aaPredicted RBP20.05■□□□□ 0.8
PLXNB3-201ENST00000361971 RNF20Q5VTR2 975 aa20.05■□□□□ 0.8
PLXNB3-201ENST00000361971 CCDC43Q96MW1 224 aaKnown RBP20.05■□□□□ 0.8
PLXNB3-201ENST00000361971 GOLGA6L19H0YKK7 550 aa20.04■□□□□ 0.8
PLXNB3-201ENST00000361971 UBTFL1P0CB47 393 aaPredicted RBP20.04■□□□□ 0.8
PLXNB3-201ENST00000361971 THEMISQ8N1K5 641 aaPredicted RBP20.04■□□□□ 0.8
PLXNB3-201ENST00000361971 ZBED9Q6R2W3 1325 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 BECN2A8MW95 431 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 MTHFSP49914 203 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 PLEKHO1Q53GL0 409 aaPredicted RBP20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 CNKSR2Q8WXI2 1034 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 HSP90AB4PQ58FF6 505 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 DDX54Q8TDD1 881 aaKnown RBP20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 ZNF428Q96B54 188 aa20.03■□□□□ 0.8
PLXNB3-201ENST00000361971 ERC2O15083 957 aa20.02■□□□□ 0.8
PLXNB3-201ENST00000361971 KDM4AO75164 1064 aa20.02■□□□□ 0.8
PLXNB3-201ENST00000361971 PDE4AP27815 886 aa20.02■□□□□ 0.8
PLXNB3-201ENST00000361971 DDX49Q9Y6V7 483 aaKnown RBP20.02■□□□□ 0.8
PLXNB3-201ENST00000361971 TOM1L2Q6ZVM7 507 aa20.02■□□□□ 0.79
PLXNB3-201ENST00000361971 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 KIF7Q2M1P5 1343 aa20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 NESP48681 1621 aa20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 FYCO1Q9BQS8 1478 aa20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
PLXNB3-201ENST00000361971 TATP17735 454 aaPredicted RBP20■□□□□ 0.79
PLXNB3-201ENST00000361971 LNPKQ9C0E8 428 aa20■□□□□ 0.79
PLXNB3-201ENST00000361971 CCDC47Q96A33 483 aaKnown RBP20■□□□□ 0.79
PLXNB3-201ENST00000361971 IKQ13123 557 aaPredicted RBP20■□□□□ 0.79
PLXNB3-201ENST00000361971 GOLGA6L1Q8N7Z2 621 aa19.99■□□□□ 0.79
PLXNB3-201ENST00000361971 GAS2L2Q8NHY3 880 aa19.99■□□□□ 0.79
PLXNB3-201ENST00000361971 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
PLXNB3-201ENST00000361971 RAPGEF3O95398 923 aa19.99■□□□□ 0.79
PLXNB3-201ENST00000361971 TPM1P09493 284 aa19.99■□□□□ 0.79
PLXNB3-201ENST00000361971 SCAPERQ9BY12 1400 aa19.98■□□□□ 0.79
PLXNB3-201ENST00000361971 RALYLQ86SE5 291 aaKnown RBP19.98■□□□□ 0.79
PLXNB3-201ENST00000361971 CDK19Q9BWU1 502 aa19.98■□□□□ 0.79
PLXNB3-201ENST00000361971 MRC2Q9UBG0 1479 aa19.98■□□□□ 0.79
PLXNB3-201ENST00000361971 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
PLXNB3-201ENST00000361971 CCDC30Q5VVM6 783 aa19.98■□□□□ 0.79
PLXNB3-201ENST00000361971 VPS37CA5D8V6 355 aaPredicted RBP19.97■□□□□ 0.79
PLXNB3-201ENST00000361971 SLC26A8Q96RN1 970 aa19.97■□□□□ 0.79
PLXNB3-201ENST00000361971 WASHC2AQ641Q2 1341 aa19.97■□□□□ 0.79
PLXNB3-201ENST00000361971 PRKAR2BP31323 418 aa19.97■□□□□ 0.79
PLXNB3-201ENST00000361971 CABP4P57796 275 aa19.97■□□□□ 0.79
PLXNB3-201ENST00000361971 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
PLXNB3-201ENST00000361971 DNAJC2Q99543 621 aaKnown RBP19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 INTS3Q68E01 1043 aaKnown RBP19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 CCAR2Q8N163 923 aaKnown RBP19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 BICD2Q8TD16 824 aa19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 XPCQ01831 940 aaPredicted RBP19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
PLXNB3-201ENST00000361971 ANKLE2Q86XL3 938 aa19.95■□□□□ 0.78
PLXNB3-201ENST00000361971 KRI1Q8N9T8 703 aaKnown RBP19.95■□□□□ 0.78
PLXNB3-201ENST00000361971 TSHZ2Q9NRE2 1034 aa19.95■□□□□ 0.78
PLXNB3-201ENST00000361971 KIF21BO75037 1637 aa19.94■□□□□ 0.78
PLXNB3-201ENST00000361971 FSD1Q9BTV5 496 aa19.94■□□□□ 0.78
PLXNB3-201ENST00000361971 CABP1Q9NZU7 370 aa19.94■□□□□ 0.78
PLXNB3-201ENST00000361971 ADAMTS8Q9UP79 889 aa19.93■□□□□ 0.78
PLXNB3-201ENST00000361971 SMC3Q9UQE7 1217 aa19.93■□□□□ 0.78
PLXNB3-201ENST00000361971 SAFBQ15424 915 aaKnown RBP eCLIP19.93■□□□□ 0.78
PLXNB3-201ENST00000361971 CNNM1Q9NRU3 951 aa19.93■□□□□ 0.78
PLXNB3-201ENST00000361971 TBC1D2BQ9UPU7 963 aa19.92■□□□□ 0.78
PLXNB3-201ENST00000361971 SURF6O75683 361 aaKnown RBP19.91■□□□□ 0.78
PLXNB3-201ENST00000361971 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
PLXNB3-201ENST00000361971 TCP11L2Q8N4U5 519 aa19.91■□□□□ 0.78
PLXNB3-201ENST00000361971 NBPF1Q3BBV0 1214 aa19.9■□□□□ 0.78
PLXNB3-201ENST00000361971 SULT6B1Q6IMI4 303 aa19.9■□□□□ 0.78
PLXNB3-201ENST00000361971 HOOK1Q9UJC3 728 aaKnown RBP19.9■□□□□ 0.78
PLXNB3-201ENST00000361971 IFT140Q96RY7 1462 aa19.9■□□□□ 0.78
PLXNB3-201ENST00000361971 ANKRD20A12PQ8NF67 263 aa19.9■□□□□ 0.78
PLXNB3-201ENST00000361971 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
PLXNB3-201ENST00000361971 CFTRP13569 1480 aa19.89■□□□□ 0.77
PLXNB3-201ENST00000361971 MYL6BP14649 208 aa19.89■□□□□ 0.77
PLXNB3-201ENST00000361971 CCAR1Q8IX12 1150 aaKnown RBP19.89■□□□□ 0.77
PLXNB3-201ENST00000361971 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
PLXNB3-201ENST00000361971 NINLQ9Y2I6 1382 aa19.89■□□□□ 0.77
PLXNB3-201ENST00000361971 CNTROBQ8N137 903 aa19.89■□□□□ 0.77
PLXNB3-201ENST00000361971 TTC39AQ5SRH9 613 aa19.88■□□□□ 0.77
PLXNB3-201ENST00000361971 ZNF530Q6P9A1 599 aaPredicted RBP19.88■□□□□ 0.77
PLXNB3-201ENST00000361971 PRDM11Q9NQV5 511 aa19.88■□□□□ 0.77
PLXNB3-201ENST00000361971 SPG7Q9UQ90 795 aa19.88■□□□□ 0.77
PLXNB3-201ENST00000361971 C9orf84Q5VXU9 1444 aa19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 STK11IPQ8N1F8 1099 aa19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 CLASRPQ8N2M8 674 aaKnown RBP19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 BRMS1Q9HCU9 246 aa19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 FBXO3Q9UK99 471 aa19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
PLXNB3-201ENST00000361971 TWISTNBQ3B726 338 aaPredicted RBP19.86■□□□□ 0.77
PLXNB3-201ENST00000361971 EXOSC9Q06265 439 aaKnown RBP19.86■□□□□ 0.77
PLXNB3-201ENST00000361971 SKOR2Q2VWA4 1001 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms