RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CCDC27Q2M243 656 aa20.74■□□□□ 0.91
CACNA1A-201ENST00000360228 NUCB2P80303 420 aa20.73■□□□□ 0.91
CACNA1A-201ENST00000360228 ROCK1Q13464 1354 aa20.73■□□□□ 0.91
CACNA1A-201ENST00000360228 KLHL34Q8N239 644 aa20.73■□□□□ 0.91
CACNA1A-201ENST00000360228 CHMP5Q9NZZ3 219 aa20.73■□□□□ 0.91
CACNA1A-201ENST00000360228 EID1Q9Y6B2 187 aa20.73■□□□□ 0.91
CACNA1A-201ENST00000360228 NF2P35240 595 aa20.72■□□□□ 0.91
CACNA1A-201ENST00000360228 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
CACNA1A-201ENST00000360228 NUTM2DQ5VT03 806 aaPredicted RBP20.72■□□□□ 0.91
CACNA1A-201ENST00000360228 ZKSCAN2Q63HK3 967 aa20.72■□□□□ 0.91
CACNA1A-201ENST00000360228 FILIP1LQ4L180 1135 aa20.72■□□□□ 0.91
CACNA1A-201ENST00000360228 TEFQ10587 303 aa20.71■□□□□ 0.91
CACNA1A-201ENST00000360228 INTS3Q68E01 1043 aaKnown RBP20.71■□□□□ 0.91
CACNA1A-201ENST00000360228 G3BP1Q13283 466 aaKnown RBP eCLIP20.7■□□□□ 0.91
CACNA1A-201ENST00000360228 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
CACNA1A-201ENST00000360228 CCDC181Q5TID7 509 aa20.7■□□□□ 0.9
CACNA1A-201ENST00000360228 FAM193AP78312 1265 aa20.7■□□□□ 0.9
CACNA1A-201ENST00000360228 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
CACNA1A-201ENST00000360228 RNF214Q8ND24 703 aa20.7■□□□□ 0.9
CACNA1A-201ENST00000360228 KINO60870 393 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-201ENST00000360228 SPC24Q8NBT2 197 aa20.69■□□□□ 0.9
CACNA1A-201ENST00000360228 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.69■□□□□ 0.9
CACNA1A-201ENST00000360228 HMGN5P82970 282 aaKnown RBP20.69■□□□□ 0.9
CACNA1A-201ENST00000360228 CRBNQ96SW2 442 aa20.69■□□□□ 0.9
CACNA1A-201ENST00000360228 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 BAZ1BQ9UIG0 1483 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 TXLNAP40222 546 aa20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 FMNL2Q96PY5 1086 aa20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 NLRP13Q86W25 1043 aa20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 ZNHIT6Q9NWK9 470 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 GOLGA6L10A0A0M3HER8 536 aa20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 SEPT11Q9NVA2 429 aaKnown RBP20.68■□□□□ 0.9
CACNA1A-201ENST00000360228 KRT18P05783 430 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-201ENST00000360228 NINLQ9Y2I6 1382 aa20.67■□□□□ 0.9
CACNA1A-201ENST00000360228 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
CACNA1A-201ENST00000360228 BCCIPQ9P287 314 aaKnown RBP eCLIP20.66■□□□□ 0.9
CACNA1A-201ENST00000360228 LETM1O95202 739 aaPredicted RBP20.66■□□□□ 0.9
CACNA1A-201ENST00000360228 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
CACNA1A-201ENST00000360228 RABEP1Q15276 862 aa20.65■□□□□ 0.9
CACNA1A-201ENST00000360228 LUC7LQ9NQ29 371 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-201ENST00000360228 DDX58O95786 925 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-201ENST00000360228 WASHC4Q2M389 1173 aa20.65■□□□□ 0.9
CACNA1A-201ENST00000360228 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
CACNA1A-201ENST00000360228 ERC2O15083 957 aa20.65■□□□□ 0.9
CACNA1A-201ENST00000360228 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.64■□□□□ 0.9
CACNA1A-201ENST00000360228 HSP90AB4PQ58FF6 505 aa20.64■□□□□ 0.89
CACNA1A-201ENST00000360228 PDCL3Q9H2J4 239 aa20.64■□□□□ 0.89
CACNA1A-201ENST00000360228 DDX19BQ9UMR2 479 aa20.63■□□□□ 0.89
CACNA1A-201ENST00000360228 NUP155O75694 1391 aa20.63■□□□□ 0.89
CACNA1A-201ENST00000360228 EIF3JO75822 258 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-201ENST00000360228 CAVIN1Q6NZI2 390 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-201ENST00000360228 E9PSI1 815 aa20.62■□□□□ 0.89
CACNA1A-201ENST00000360228 FAM177A1Q8N128 213 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-201ENST00000360228 LRRCC1Q9C099 1032 aa20.62■□□□□ 0.89
CACNA1A-201ENST00000360228 RRP1P56182 461 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-201ENST00000360228 SPATA24Q86W54 205 aa20.62■□□□□ 0.89
CACNA1A-201ENST00000360228 DHX8Q14562 1220 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-201ENST00000360228 NEUROD6Q96NK8 337 aa20.61■□□□□ 0.89
CACNA1A-201ENST00000360228 ERICH4A6NGS2 130 aa20.61■□□□□ 0.89
CACNA1A-201ENST00000360228 SART3Q15020 963 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-201ENST00000360228 TSPY26PQ9H489 355 aa20.61■□□□□ 0.89
CACNA1A-201ENST00000360228 COG3Q96JB2 828 aa20.61■□□□□ 0.89
CACNA1A-201ENST00000360228 LRRFIP2Q9Y608 721 aaKnown RBP20.6■□□□□ 0.89
CACNA1A-201ENST00000360228 SERPINC1P01008 464 aa20.6■□□□□ 0.89
CACNA1A-201ENST00000360228 PSMA5P28066 241 aa20.6■□□□□ 0.89
CACNA1A-201ENST00000360228 CCDC112Q8NEF3 446 aa20.6■□□□□ 0.89
CACNA1A-201ENST00000360228 PRDM2Q13029 1718 aa20.6■□□□□ 0.89
CACNA1A-201ENST00000360228 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
CACNA1A-201ENST00000360228 KIF7Q2M1P5 1343 aa20.59■□□□□ 0.89
CACNA1A-201ENST00000360228 NEBLO76041 1014 aa20.59■□□□□ 0.89
CACNA1A-201ENST00000360228 CEBPZQ03701 1054 aaKnown RBP20.59■□□□□ 0.89
CACNA1A-201ENST00000360228 IQCEQ6IPM2 695 aa20.59■□□□□ 0.89
CACNA1A-201ENST00000360228 SLC26A8Q96RN1 970 aa20.58■□□□□ 0.89
CACNA1A-201ENST00000360228 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
CACNA1A-201ENST00000360228 CCDC91Q7Z6B0 441 aa20.58■□□□□ 0.89
CACNA1A-201ENST00000360228 PPFIBP1Q86W92 1011 aa20.58■□□□□ 0.88
CACNA1A-201ENST00000360228 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
CACNA1A-201ENST00000360228 MYBBP1AQ9BQG0 1328 aaKnown RBP20.58■□□□□ 0.88
CACNA1A-201ENST00000360228 MRE11P49959 708 aa20.58■□□□□ 0.88
CACNA1A-201ENST00000360228 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.88
CACNA1A-201ENST00000360228 TXLNBQ8N3L3 684 aa20.58■□□□□ 0.88
CACNA1A-201ENST00000360228 PPM1FP49593 454 aaPredicted RBP20.57■□□□□ 0.88
CACNA1A-201ENST00000360228 TANGO6Q9C0B7 1094 aa20.57■□□□□ 0.88
CACNA1A-201ENST00000360228 C22orf23Q9BZE7 217 aa20.57■□□□□ 0.88
CACNA1A-201ENST00000360228 RRP9O43818 475 aaKnown RBP20.57■□□□□ 0.88
CACNA1A-201ENST00000360228 DDX11Q96FC9 970 aa20.57■□□□□ 0.88
CACNA1A-201ENST00000360228 RSPH4AQ5TD94 716 aa20.56■□□□□ 0.88
CACNA1A-201ENST00000360228 STIM1Q13586 685 aa20.56■□□□□ 0.88
CACNA1A-201ENST00000360228 EXOC6Q8TAG9 804 aa20.56■□□□□ 0.88
CACNA1A-201ENST00000360228 ZHX3Q9H4I2 956 aa20.56■□□□□ 0.88
CACNA1A-201ENST00000360228 ERLIN1O75477 346 aa20.55■□□□□ 0.88
CACNA1A-201ENST00000360228 DESP17661 470 aa20.55■□□□□ 0.88
CACNA1A-201ENST00000360228 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
CACNA1A-201ENST00000360228 MATR3P43243 847 aaKnown RBP eCLIP20.55■□□□□ 0.88
CACNA1A-201ENST00000360228 TNIKQ9UKE5 1360 aa20.55■□□□□ 0.88
CACNA1A-201ENST00000360228 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
CACNA1A-201ENST00000360228 CNTROBQ8N137 903 aa20.54■□□□□ 0.88
CACNA1A-201ENST00000360228 CFAP57Q96MR6 1250 aa20.54■□□□□ 0.88
CACNA1A-201ENST00000360228 PIP4K2AP48426 406 aaPredicted RBP20.54■□□□□ 0.88
CACNA1A-201ENST00000360228 MAP2K1Q02750 393 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms