RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 FAM135BQ49AJ0 1406 aa17.5■□□□□ 0.39
NIF3L1-201ENST00000359683 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
NIF3L1-201ENST00000359683 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
NIF3L1-201ENST00000359683 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
NIF3L1-201ENST00000359683 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
NIF3L1-201ENST00000359683 WAPLQ7Z5K2 1190 aa17.48■□□□□ 0.39
NIF3L1-201ENST00000359683 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
NIF3L1-201ENST00000359683 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
NIF3L1-201ENST00000359683 POGKQ9P215 609 aa17.47■□□□□ 0.39
NIF3L1-201ENST00000359683 NKTRP30414 1462 aaKnown RBP17.47■□□□□ 0.39
NIF3L1-201ENST00000359683 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
NIF3L1-201ENST00000359683 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
NIF3L1-201ENST00000359683 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
NIF3L1-201ENST00000359683 TESK2Q96S53 571 aa17.44■□□□□ 0.38
NIF3L1-201ENST00000359683 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
NIF3L1-201ENST00000359683 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
NIF3L1-201ENST00000359683 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
NIF3L1-201ENST00000359683 NCOA3Q9Y6Q9 1424 aa17.42■□□□□ 0.38
NIF3L1-201ENST00000359683 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
NIF3L1-201ENST00000359683 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
NIF3L1-201ENST00000359683 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
NIF3L1-201ENST00000359683 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.39■□□□□ 0.37
NIF3L1-201ENST00000359683 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
NIF3L1-201ENST00000359683 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
NIF3L1-201ENST00000359683 MINK1Q8N4C8 1332 aaPredicted RBP17.39■□□□□ 0.37
NIF3L1-201ENST00000359683 ADGRL3Q9HAR2 1447 aa17.36■□□□□ 0.37
NIF3L1-201ENST00000359683 TMF1P82094 1093 aa17.36■□□□□ 0.37
NIF3L1-201ENST00000359683 C19orf44Q9H6X5 657 aa17.36■□□□□ 0.37
NIF3L1-201ENST00000359683 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
NIF3L1-201ENST00000359683 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
NIF3L1-201ENST00000359683 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
NIF3L1-201ENST00000359683 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
NIF3L1-201ENST00000359683 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.37
NIF3L1-201ENST00000359683 CDK19Q9BWU1 502 aa17.33■□□□□ 0.37
NIF3L1-201ENST00000359683 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.36
NIF3L1-201ENST00000359683 PUS7Q96PZ0 661 aaKnown RBP17.32■□□□□ 0.36
NIF3L1-201ENST00000359683 TULP4Q9NRJ4 1543 aa17.32■□□□□ 0.36
NIF3L1-201ENST00000359683 MSH6P52701 1360 aa17.32■□□□□ 0.36
NIF3L1-201ENST00000359683 CDCA8Q53HL2 280 aa17.3■□□□□ 0.36
NIF3L1-201ENST00000359683 PHLPP1O60346 1717 aa17.3■□□□□ 0.36
NIF3L1-201ENST00000359683 DCCP43146 1447 aa17.3■□□□□ 0.36
NIF3L1-201ENST00000359683 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
NIF3L1-201ENST00000359683 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
NIF3L1-201ENST00000359683 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
NIF3L1-201ENST00000359683 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
NIF3L1-201ENST00000359683 ATF3P18847 181 aa17.28■□□□□ 0.36
NIF3L1-201ENST00000359683 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
NIF3L1-201ENST00000359683 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.35
NIF3L1-201ENST00000359683 NUDT16Q96DE0 195 aaKnown RBP17.26■□□□□ 0.35
NIF3L1-201ENST00000359683 WASHC2AQ641Q2 1341 aa17.26■□□□□ 0.35
NIF3L1-201ENST00000359683 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
NIF3L1-201ENST00000359683 FMN2Q9NZ56 1722 aa17.26■□□□□ 0.35
NIF3L1-201ENST00000359683 CCDC7Q96M83 1385 aa17.26■□□□□ 0.35
NIF3L1-201ENST00000359683 ANKARQ7Z5J8 1434 aa17.25■□□□□ 0.35
NIF3L1-201ENST00000359683 CCDC61Q9Y6R9 512 aa17.25■□□□□ 0.35
NIF3L1-201ENST00000359683 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
NIF3L1-201ENST00000359683 NUTM2FA1L443 756 aa17.24■□□□□ 0.35
NIF3L1-201ENST00000359683 COL16A1Q07092 1604 aaPredicted RBP17.23■□□□□ 0.35
NIF3L1-201ENST00000359683 MST1RQ04912 1400 aa17.23■□□□□ 0.35
NIF3L1-201ENST00000359683 ATP7BP35670 1465 aa17.23■□□□□ 0.35
NIF3L1-201ENST00000359683 USP32Q8NFA0 1604 aa17.22■□□□□ 0.35
NIF3L1-201ENST00000359683 POLR3GLQ9BT43 218 aa17.21■□□□□ 0.35
NIF3L1-201ENST00000359683 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
NIF3L1-201ENST00000359683 C1orf167Q5SNV9 1468 aa17.21■□□□□ 0.35
NIF3L1-201ENST00000359683 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
NIF3L1-201ENST00000359683 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
NIF3L1-201ENST00000359683 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
NIF3L1-201ENST00000359683 RGS17Q9UGC6 210 aaPredicted RBP17.2■□□□□ 0.34
NIF3L1-201ENST00000359683 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
NIF3L1-201ENST00000359683 NINLQ9Y2I6 1382 aa17.18■□□□□ 0.34
NIF3L1-201ENST00000359683 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
NIF3L1-201ENST00000359683 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
NIF3L1-201ENST00000359683 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
NIF3L1-201ENST00000359683 ESCO1Q5FWF5 840 aa17.18■□□□□ 0.34
NIF3L1-201ENST00000359683 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
NIF3L1-201ENST00000359683 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
NIF3L1-201ENST00000359683 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
NIF3L1-201ENST00000359683 JCADQ9P266 1359 aa17.16■□□□□ 0.34
NIF3L1-201ENST00000359683 ITSN1Q15811 1721 aa17.15■□□□□ 0.34
NIF3L1-201ENST00000359683 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
NIF3L1-201ENST00000359683 MYOM1P52179 1685 aa17.15■□□□□ 0.34
NIF3L1-201ENST00000359683 PMFBP1Q8TBY8 1022 aa17.14■□□□□ 0.33
NIF3L1-201ENST00000359683 BRINP3Q76B58 766 aa17.14■□□□□ 0.33
NIF3L1-201ENST00000359683 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 CD163L1Q9NR16 1453 aa17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 ACEP12821 1306 aa17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 PANK3Q9H999 370 aa17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
NIF3L1-201ENST00000359683 DDX10Q13206 875 aaKnown RBP17.12■□□□□ 0.33
NIF3L1-201ENST00000359683 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
NIF3L1-201ENST00000359683 ANKRD36BQ8N2N9 1353 aa17.12■□□□□ 0.33
NIF3L1-201ENST00000359683 LRP6O75581 1613 aa17.11■□□□□ 0.33
NIF3L1-201ENST00000359683 HDGFL2Q7Z4V5 671 aaPredicted RBP17.11■□□□□ 0.33
NIF3L1-201ENST00000359683 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
NIF3L1-201ENST00000359683 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
NIF3L1-201ENST00000359683 KIF1AQ12756 1690 aa17.1■□□□□ 0.33
NIF3L1-201ENST00000359683 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
NIF3L1-201ENST00000359683 FOXO3O43524 673 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms