RNA–Protein interactions for RNA: ENST00000359315.6

TPGS1-201, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPGS1, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-201ENST00000359315 C1orf167Q5SNV9 1468 aa39.01■■■■□ 3.84
TPGS1-201ENST00000359315 CDC42BPGQ6DT37 1551 aa39■■■■□ 3.83
TPGS1-201ENST00000359315 SAFB2Q14151 953 aaKnown RBP eCLIP39■■■■□ 3.83
TPGS1-201ENST00000359315 NBPF1Q3BBV0 1214 aa38.97■■■■□ 3.83
TPGS1-201ENST00000359315 AHDC1Q5TGY3 1603 aaPredicted RBP38.93■■■■□ 3.82
TPGS1-201ENST00000359315 PHLPP1O60346 1717 aa38.92■■■■□ 3.82
TPGS1-201ENST00000359315 ORAI2Q96SN7 254 aa38.92■■■■□ 3.82
TPGS1-201ENST00000359315 COL16A1Q07092 1604 aaPredicted RBP38.92■■■■□ 3.82
TPGS1-201ENST00000359315 NUTM2FA1L443 756 aa38.91■■■■□ 3.82
TPGS1-201ENST00000359315 DDX17Q92841 729 aaKnown RBP38.91■■■■□ 3.82
TPGS1-201ENST00000359315 POGKQ9P215 609 aa38.91■■■■□ 3.82
TPGS1-201ENST00000359315 KIAA1210Q9ULL0 1709 aa38.9■■■■□ 3.82
TPGS1-201ENST00000359315 MED1Q15648 1581 aaPredicted RBP38.86■■■■□ 3.81
TPGS1-201ENST00000359315 DISP3Q9P2K9 1392 aa38.83■■■■□ 3.81
TPGS1-201ENST00000359315 NBPF8Q3BBV2 869 aa38.83■■■■□ 3.81
TPGS1-201ENST00000359315 TONSLQ96HA7 1378 aa38.82■■■■□ 3.81
TPGS1-201ENST00000359315 HIRIP3Q9BW71 556 aaPredicted RBP38.82■■■■□ 3.8
TPGS1-201ENST00000359315 ARHGEF28Q8N1W1 1705 aaKnown RBP38.82■■■■□ 3.8
TPGS1-201ENST00000359315 NHSL1Q5SYE7 1610 aa38.81■■■■□ 3.8
TPGS1-201ENST00000359315 FMN2Q9NZ56 1722 aa38.81■■■■□ 3.8
TPGS1-201ENST00000359315 MINK1Q8N4C8 1332 aaPredicted RBP38.81■■■■□ 3.8
TPGS1-201ENST00000359315 ESCO1Q5FWF5 840 aa38.79■■■■□ 3.8
TPGS1-201ENST00000359315 ADGRB2O60241 1585 aa38.78■■■■□ 3.8
TPGS1-201ENST00000359315 JCADQ9P266 1359 aa38.77■■■■□ 3.8
TPGS1-201ENST00000359315 TRPM1Q7Z4N2 1603 aa38.77■■■■□ 3.8
TPGS1-201ENST00000359315 ROCK2O75116 1388 aaKnown RBP38.7■■■■□ 3.78
TPGS1-201ENST00000359315 SOS2Q07890 1332 aaPredicted RBP38.67■■■■□ 3.78
TPGS1-201ENST00000359315 USP32Q8NFA0 1604 aa38.67■■■■□ 3.78
TPGS1-201ENST00000359315 PRR36Q9H6K5 1346 aa38.66■■■■□ 3.78
TPGS1-201ENST00000359315 FOXO3O43524 673 aa38.66■■■■□ 3.78
TPGS1-201ENST00000359315 WASLO00401 505 aaPredicted RBP38.65■■■■□ 3.78
TPGS1-201ENST00000359315 XPCQ01831 940 aaPredicted RBP38.65■■■■□ 3.78
TPGS1-201ENST00000359315 ANKARQ7Z5J8 1434 aa38.63■■■■□ 3.78
TPGS1-201ENST00000359315 LRP6O75581 1613 aa38.62■■■■□ 3.77
TPGS1-201ENST00000359315 PXDNQ92626 1479 aa38.61■■■■□ 3.77
TPGS1-201ENST00000359315 GPRASP1Q5JY77 1395 aa38.61■■■■□ 3.77
TPGS1-201ENST00000359315 LRRC59Q96AG4 307 aaKnown RBP38.61■■■■□ 3.77
TPGS1-201ENST00000359315 TULP4Q9NRJ4 1543 aa38.61■■■■□ 3.77
TPGS1-201ENST00000359315 SHPRHQ149N8 1683 aa38.61■■■■□ 3.77
TPGS1-201ENST00000359315 NPHP3Q7Z494 1330 aa38.61■■■■□ 3.77
TPGS1-201ENST00000359315 CENPJQ9HC77 1338 aaPredicted RBP38.61■■■■□ 3.77
TPGS1-201ENST00000359315 PNPLA6Q8IY17 1366 aa38.6■■■■□ 3.77
TPGS1-201ENST00000359315 PHF8Q9UPP1 1060 aa38.59■■■■□ 3.77
TPGS1-201ENST00000359315 RALGAPBQ86X10 1494 aa38.59■■■■□ 3.77
TPGS1-201ENST00000359315 RGPD8O14715 1765 aaPredicted RBP38.57■■■■□ 3.77
TPGS1-201ENST00000359315 SPATA31A6Q5VVP1 1343 aa38.57■■■■□ 3.76
TPGS1-201ENST00000359315 CLSPNQ9HAW4 1339 aa38.56■■■■□ 3.76
TPGS1-201ENST00000359315 KIF1AQ12756 1690 aa38.55■■■■□ 3.76
TPGS1-201ENST00000359315 PMFBP1Q8TBY8 1022 aa38.54■■■■□ 3.76
TPGS1-201ENST00000359315 PHF23Q9BUL5 403 aaPredicted RBP38.54■■■■□ 3.76
TPGS1-201ENST00000359315 EIF3AQ14152 1382 aaKnown RBP38.54■■■■□ 3.76
TPGS1-201ENST00000359315 ATP7BP35670 1465 aa38.54■■■■□ 3.76
TPGS1-201ENST00000359315 CDK19Q9BWU1 502 aa38.53■■■■□ 3.76
TPGS1-201ENST00000359315 ILDR2Q71H61 639 aa38.52■■■■□ 3.76
TPGS1-201ENST00000359315 CCER1Q8TC90 406 aaPredicted RBP38.51■■■■□ 3.76
TPGS1-201ENST00000359315 NUTM2BA6NNL0 878 aaPredicted RBP38.5■■■■□ 3.75
TPGS1-201ENST00000359315 NUTM2EB1AL46 878 aaPredicted RBP38.5■■■■□ 3.75
TPGS1-201ENST00000359315 NUTM2AQ8IVF1 878 aaPredicted RBP38.5■■■■□ 3.75
TPGS1-201ENST00000359315 CARD11Q9BXL7 1154 aa38.5■■■■□ 3.75
TPGS1-201ENST00000359315 QRICH2Q9H0J4 1663 aa38.49■■■■□ 3.75
TPGS1-201ENST00000359315 RGS17Q9UGC6 210 aaPredicted RBP38.49■■■■□ 3.75
TPGS1-201ENST00000359315 KRT28Q7Z3Y7 464 aa38.47■■■■□ 3.75
TPGS1-201ENST00000359315 NUDT16Q96DE0 195 aaKnown RBP38.47■■■■□ 3.75
TPGS1-201ENST00000359315 CABP2Q9NPB3 220 aa38.41■■■■□ 3.74
TPGS1-201ENST00000359315 SPATA31A3Q5VYP0 1347 aa38.4■■■■□ 3.74
TPGS1-201ENST00000359315 SRPK2P78362 688 aaKnown RBP38.38■■■■□ 3.73
TPGS1-201ENST00000359315 MEX3CQ5U5Q3 659 aaKnown RBP38.38■■■■□ 3.73
TPGS1-201ENST00000359315 PSME1Q06323 249 aa38.37■■■■□ 3.73
TPGS1-201ENST00000359315 COL22A1Q8NFW1 1626 aaPredicted RBP38.36■■■■□ 3.73
TPGS1-201ENST00000359315 TOPAZ1Q8N9V7 1692 aa38.36■■■■□ 3.73
TPGS1-201ENST00000359315 TNS3Q68CZ2 1445 aa38.35■■■■□ 3.73
TPGS1-201ENST00000359315 TIMELESSQ9UNS1 1208 aa38.34■■■■□ 3.73
TPGS1-201ENST00000359315 CCDC61Q9Y6R9 512 aa38.34■■■■□ 3.73
TPGS1-201ENST00000359315 NGDNQ8NEJ9 315 aaKnown RBP38.33■■■■□ 3.73
TPGS1-201ENST00000359315 SBNO1A3KN83 1393 aa38.32■■■■□ 3.73
TPGS1-201ENST00000359315 ADAMTS2O95450 1211 aa38.31■■■■□ 3.72
TPGS1-201ENST00000359315 EVC2Q86UK5 1308 aa38.3■■■■□ 3.72
TPGS1-201ENST00000359315 ITSN1Q15811 1721 aa38.29■■■■□ 3.72
TPGS1-201ENST00000359315 POTEAQ6S8J7 498 aa38.29■■■■□ 3.72
TPGS1-201ENST00000359315 TRPM3Q9HCF6 1732 aaPredicted RBP38.28■■■■□ 3.72
TPGS1-201ENST00000359315 PPIP5K1Q6PFW1 1433 aa38.28■■■■□ 3.72
TPGS1-201ENST00000359315 ACEP12821 1306 aa38.27■■■■□ 3.72
TPGS1-201ENST00000359315 POLR3AO14802 1390 aaPredicted RBP38.27■■■■□ 3.72
TPGS1-201ENST00000359315 SBNO2Q9Y2G9 1366 aa38.27■■■■□ 3.72
TPGS1-201ENST00000359315 PLEKHG3A1L390 1219 aa38.26■■■■□ 3.72
TPGS1-201ENST00000359315 LMOD2Q6P5Q4 547 aa38.25■■■■□ 3.71
TPGS1-201ENST00000359315 C8orf37Q96NL8 207 aa38.25■■■■□ 3.71
TPGS1-201ENST00000359315 PLEKHG5O94827 1062 aa38.24■■■■□ 3.71
TPGS1-201ENST00000359315 CABLES1Q8TDN4 633 aa38.21■■■■□ 3.71
TPGS1-201ENST00000359315 AFF2P51816 1311 aa38.2■■■■□ 3.71
TPGS1-201ENST00000359315 CABP1Q9NZU7 370 aa38.2■■■■□ 3.71
TPGS1-201ENST00000359315 ARHGEF10O15013 1369 aa38.19■■■■□ 3.7
TPGS1-201ENST00000359315 ST20-MTHFSA0A0A6YYL1 179 aa38.19■■■■□ 3.7
TPGS1-201ENST00000359315 USP47Q96K76 1375 aa38.18■■■■□ 3.7
TPGS1-201ENST00000359315 TESK2Q96S53 571 aa38.17■■■■□ 3.7
TPGS1-201ENST00000359315 ALS2Q96Q42 1657 aa38.17■■■■□ 3.7
TPGS1-201ENST00000359315 PAK3O75914 559 aaPredicted RBP38.16■■■■□ 3.7
TPGS1-201ENST00000359315 NGLY1Q96IV0 654 aa38.12■■■■□ 3.69
TPGS1-201ENST00000359315 ATAD2Q6PL18 1390 aa38.11■■■■□ 3.69
TPGS1-201ENST00000359315 ZNF772Q68DY9 489 aaPredicted RBP38.11■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms