RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 L3MBTL2Q969R5 705 aa24.62■■□□□ 1.53
FAM3D-201ENST00000358781 KIAA1210Q9ULL0 1709 aa24.62■■□□□ 1.53
FAM3D-201ENST00000358781 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
FAM3D-201ENST00000358781 DISP3Q9P2K9 1392 aa24.61■■□□□ 1.53
FAM3D-201ENST00000358781 PRAM1Q96QH2 718 aa24.61■■□□□ 1.53
FAM3D-201ENST00000358781 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
FAM3D-201ENST00000358781 TRAK1Q9UPV9 953 aa24.6■■□□□ 1.53
FAM3D-201ENST00000358781 NHSL1Q5SYE7 1610 aa24.58■■□□□ 1.52
FAM3D-201ENST00000358781 POGKQ9P215 609 aa24.57■■□□□ 1.52
FAM3D-201ENST00000358781 SAFB2Q14151 953 aaKnown RBP eCLIP24.56■■□□□ 1.52
FAM3D-201ENST00000358781 FMN2Q9NZ56 1722 aa24.55■■□□□ 1.52
FAM3D-201ENST00000358781 ORAI2Q96SN7 254 aa24.55■■□□□ 1.52
FAM3D-201ENST00000358781 JCADQ9P266 1359 aa24.55■■□□□ 1.52
FAM3D-201ENST00000358781 ARHGEF28Q8N1W1 1705 aaKnown RBP24.53■■□□□ 1.52
FAM3D-201ENST00000358781 NBPF1Q3BBV0 1214 aa24.52■■□□□ 1.52
FAM3D-201ENST00000358781 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
FAM3D-201ENST00000358781 DDX17Q92841 729 aaKnown RBP24.51■■□□□ 1.51
FAM3D-201ENST00000358781 ADGRB2O60241 1585 aa24.51■■□□□ 1.51
FAM3D-201ENST00000358781 NUTM2FA1L443 756 aa24.5■■□□□ 1.51
FAM3D-201ENST00000358781 ESCO1Q5FWF5 840 aa24.5■■□□□ 1.51
FAM3D-201ENST00000358781 SHPRHQ149N8 1683 aa24.48■■□□□ 1.51
FAM3D-201ENST00000358781 TRPM1Q7Z4N2 1603 aa24.47■■□□□ 1.51
FAM3D-201ENST00000358781 MINK1Q8N4C8 1332 aaPredicted RBP24.46■■□□□ 1.51
FAM3D-201ENST00000358781 LRRC59Q96AG4 307 aaKnown RBP24.45■■□□□ 1.5
FAM3D-201ENST00000358781 HIRIP3Q9BW71 556 aaPredicted RBP24.45■■□□□ 1.5
FAM3D-201ENST00000358781 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
FAM3D-201ENST00000358781 RGPD8O14715 1765 aaPredicted RBP24.45■■□□□ 1.5
FAM3D-201ENST00000358781 SOS2Q07890 1332 aaPredicted RBP24.44■■□□□ 1.5
FAM3D-201ENST00000358781 SPATA31A6Q5VVP1 1343 aa24.43■■□□□ 1.5
FAM3D-201ENST00000358781 NPHP3Q7Z494 1330 aa24.43■■□□□ 1.5
FAM3D-201ENST00000358781 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
FAM3D-201ENST00000358781 ANKARQ7Z5J8 1434 aa24.42■■□□□ 1.5
FAM3D-201ENST00000358781 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
FAM3D-201ENST00000358781 FOXO3O43524 673 aa24.4■■□□□ 1.5
FAM3D-201ENST00000358781 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
FAM3D-201ENST00000358781 USP32Q8NFA0 1604 aa24.4■■□□□ 1.5
FAM3D-201ENST00000358781 EIF3AQ14152 1382 aaKnown RBP24.4■■□□□ 1.5
FAM3D-201ENST00000358781 WASLO00401 505 aaPredicted RBP24.39■■□□□ 1.5
FAM3D-201ENST00000358781 PXDNQ92626 1479 aa24.39■■□□□ 1.49
FAM3D-201ENST00000358781 ROCK2O75116 1388 aaKnown RBP24.39■■□□□ 1.49
FAM3D-201ENST00000358781 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
FAM3D-201ENST00000358781 TULP4Q9NRJ4 1543 aa24.38■■□□□ 1.49
FAM3D-201ENST00000358781 PHF8Q9UPP1 1060 aa24.37■■□□□ 1.49
FAM3D-201ENST00000358781 LRP6O75581 1613 aa24.37■■□□□ 1.49
FAM3D-201ENST00000358781 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
FAM3D-201ENST00000358781 PRR36Q9H6K5 1346 aa24.35■■□□□ 1.49
FAM3D-201ENST00000358781 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
FAM3D-201ENST00000358781 XPCQ01831 940 aaPredicted RBP24.35■■□□□ 1.49
FAM3D-201ENST00000358781 GPRASP1Q5JY77 1395 aa24.34■■□□□ 1.49
FAM3D-201ENST00000358781 QRICH2Q9H0J4 1663 aa24.33■■□□□ 1.48
FAM3D-201ENST00000358781 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
FAM3D-201ENST00000358781 NUTM2BA6NNL0 878 aaPredicted RBP24.32■■□□□ 1.48
FAM3D-201ENST00000358781 NUTM2EB1AL46 878 aaPredicted RBP24.32■■□□□ 1.48
FAM3D-201ENST00000358781 NUTM2AQ8IVF1 878 aaPredicted RBP24.32■■□□□ 1.48
FAM3D-201ENST00000358781 CDK19Q9BWU1 502 aa24.32■■□□□ 1.48
FAM3D-201ENST00000358781 RGS17Q9UGC6 210 aaPredicted RBP24.32■■□□□ 1.48
FAM3D-201ENST00000358781 RALGAPBQ86X10 1494 aa24.31■■□□□ 1.48
FAM3D-201ENST00000358781 KRT28Q7Z3Y7 464 aa24.31■■□□□ 1.48
FAM3D-201ENST00000358781 MEX3CQ5U5Q3 659 aaKnown RBP24.3■■□□□ 1.48
FAM3D-201ENST00000358781 PMFBP1Q8TBY8 1022 aa24.3■■□□□ 1.48
FAM3D-201ENST00000358781 ATP7BP35670 1465 aa24.3■■□□□ 1.48
FAM3D-201ENST00000358781 COL22A1Q8NFW1 1626 aaPredicted RBP24.29■■□□□ 1.48
FAM3D-201ENST00000358781 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
FAM3D-201ENST00000358781 ITSN1Q15811 1721 aa24.28■■□□□ 1.48
FAM3D-201ENST00000358781 PSME1Q06323 249 aa24.27■■□□□ 1.48
FAM3D-201ENST00000358781 SPATA31A3Q5VYP0 1347 aa24.26■■□□□ 1.47
FAM3D-201ENST00000358781 CARD11Q9BXL7 1154 aa24.26■■□□□ 1.47
FAM3D-201ENST00000358781 TOPAZ1Q8N9V7 1692 aa24.24■■□□□ 1.47
FAM3D-201ENST00000358781 SBNO1A3KN83 1393 aa24.23■■□□□ 1.47
FAM3D-201ENST00000358781 TNS3Q68CZ2 1445 aa24.23■■□□□ 1.47
FAM3D-201ENST00000358781 NGDNQ8NEJ9 315 aaKnown RBP24.22■■□□□ 1.47
FAM3D-201ENST00000358781 CCDC61Q9Y6R9 512 aa24.22■■□□□ 1.47
FAM3D-201ENST00000358781 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
FAM3D-201ENST00000358781 CCER1Q8TC90 406 aaPredicted RBP24.21■■□□□ 1.47
FAM3D-201ENST00000358781 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
FAM3D-201ENST00000358781 TRPM3Q9HCF6 1732 aaPredicted RBP24.2■■□□□ 1.47
FAM3D-201ENST00000358781 POTEAQ6S8J7 498 aa24.19■■□□□ 1.46
FAM3D-201ENST00000358781 CABP2Q9NPB3 220 aa24.19■■□□□ 1.46
FAM3D-201ENST00000358781 EVC2Q86UK5 1308 aa24.19■■□□□ 1.46
FAM3D-201ENST00000358781 ADAMTS2O95450 1211 aa24.18■■□□□ 1.46
FAM3D-201ENST00000358781 PLEKHG3A1L390 1219 aa24.17■■□□□ 1.46
FAM3D-201ENST00000358781 ARHGEF10O15013 1369 aa24.17■■□□□ 1.46
FAM3D-201ENST00000358781 POLR3AO14802 1390 aaPredicted RBP24.16■■□□□ 1.46
FAM3D-201ENST00000358781 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
FAM3D-201ENST00000358781 ZNF772Q68DY9 489 aaPredicted RBP24.16■■□□□ 1.46
FAM3D-201ENST00000358781 C8orf37Q96NL8 207 aa24.16■■□□□ 1.46
FAM3D-201ENST00000358781 AFF2P51816 1311 aa24.15■■□□□ 1.46
FAM3D-201ENST00000358781 LMOD2Q6P5Q4 547 aa24.14■■□□□ 1.46
FAM3D-201ENST00000358781 ALS2Q96Q42 1657 aa24.14■■□□□ 1.46
FAM3D-201ENST00000358781 PPIP5K1Q6PFW1 1433 aa24.14■■□□□ 1.46
FAM3D-201ENST00000358781 ACEP12821 1306 aa24.14■■□□□ 1.45
FAM3D-201ENST00000358781 MARF1Q9Y4F3 1742 aaKnown RBP24.13■■□□□ 1.45
FAM3D-201ENST00000358781 NGLY1Q96IV0 654 aa24.12■■□□□ 1.45
FAM3D-201ENST00000358781 ABCA3Q99758 1704 aa24.1■■□□□ 1.45
FAM3D-201ENST00000358781 SOCS7O14512 581 aa24.1■■□□□ 1.45
FAM3D-201ENST00000358781 PAK3O75914 559 aaPredicted RBP24.1■■□□□ 1.45
FAM3D-201ENST00000358781 CABLES1Q8TDN4 633 aa24.1■■□□□ 1.45
FAM3D-201ENST00000358781 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
FAM3D-201ENST00000358781 PLEKHG5O94827 1062 aa24.07■■□□□ 1.44
FAM3D-201ENST00000358781 HAP1P54257 671 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms