RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
COPS7B-202ENST00000357490 LAMC1P11047 1609 aa23.08■■□□□ 1.28
COPS7B-202ENST00000357490 NBPF8Q3BBV2 869 aa23.06■■□□□ 1.28
COPS7B-202ENST00000357490 LRP6O75581 1613 aa23.05■■□□□ 1.28
COPS7B-202ENST00000357490 ROBO2Q9HCK4 1378 aa23.05■■□□□ 1.28
COPS7B-202ENST00000357490 POTEAQ6S8J7 498 aa23.05■■□□□ 1.28
COPS7B-202ENST00000357490 STK26Q9P289 416 aa23.05■■□□□ 1.28
COPS7B-202ENST00000357490 MEX3CQ5U5Q3 659 aaKnown RBP23.04■■□□□ 1.28
COPS7B-202ENST00000357490 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
COPS7B-202ENST00000357490 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
COPS7B-202ENST00000357490 YTHDC2Q9H6S0 1430 aaKnown RBP23.02■■□□□ 1.28
COPS7B-202ENST00000357490 TIMELESSQ9UNS1 1208 aa23.02■■□□□ 1.28
COPS7B-202ENST00000357490 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
COPS7B-202ENST00000357490 C1orf167Q5SNV9 1468 aa23.01■■□□□ 1.27
COPS7B-202ENST00000357490 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
COPS7B-202ENST00000357490 KIAA1210Q9ULL0 1709 aa23.01■■□□□ 1.27
COPS7B-202ENST00000357490 ABCC11Q96J66 1382 aa23■■□□□ 1.27
COPS7B-202ENST00000357490 KNDC1Q76NI1 1749 aa22.99■■□□□ 1.27
COPS7B-202ENST00000357490 CDC42BPGQ6DT37 1551 aa22.98■■□□□ 1.27
COPS7B-202ENST00000357490 TRPM1Q7Z4N2 1603 aa22.98■■□□□ 1.27
COPS7B-202ENST00000357490 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
COPS7B-202ENST00000357490 TECPR2O15040 1411 aa22.97■■□□□ 1.27
COPS7B-202ENST00000357490 TRAK1Q9UPV9 953 aa22.96■■□□□ 1.27
COPS7B-202ENST00000357490 WAPLQ7Z5K2 1190 aa22.95■■□□□ 1.26
COPS7B-202ENST00000357490 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
COPS7B-202ENST00000357490 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
COPS7B-202ENST00000357490 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
COPS7B-202ENST00000357490 ROCK2O75116 1388 aaKnown RBP22.92■■□□□ 1.26
COPS7B-202ENST00000357490 PLEKHH1Q9ULM0 1364 aa22.92■■□□□ 1.26
COPS7B-202ENST00000357490 DDX17Q92841 729 aaKnown RBP22.92■■□□□ 1.26
COPS7B-202ENST00000357490 SIRT1Q96EB6 747 aa22.92■■□□□ 1.26
COPS7B-202ENST00000357490 PNPLA6Q8IY17 1366 aa22.91■■□□□ 1.26
COPS7B-202ENST00000357490 PRAM1Q96QH2 718 aa22.9■■□□□ 1.26
COPS7B-202ENST00000357490 ORAI2Q96SN7 254 aa22.9■■□□□ 1.26
COPS7B-202ENST00000357490 DLC1Q96QB1 1528 aa22.9■■□□□ 1.26
COPS7B-202ENST00000357490 SOS2Q07890 1332 aaPredicted RBP22.88■■□□□ 1.25
COPS7B-202ENST00000357490 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
COPS7B-202ENST00000357490 SAFB2Q14151 953 aaKnown RBP eCLIP22.88■■□□□ 1.25
COPS7B-202ENST00000357490 POGKQ9P215 609 aa22.87■■□□□ 1.25
COPS7B-202ENST00000357490 GPRASP1Q5JY77 1395 aa22.87■■□□□ 1.25
COPS7B-202ENST00000357490 ARHGEF28Q8N1W1 1705 aaKnown RBP22.86■■□□□ 1.25
COPS7B-202ENST00000357490 FMN2Q9NZ56 1722 aa22.86■■□□□ 1.25
COPS7B-202ENST00000357490 COL22A1Q8NFW1 1626 aaPredicted RBP22.86■■□□□ 1.25
COPS7B-202ENST00000357490 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
COPS7B-202ENST00000357490 AFF2P51816 1311 aa22.84■■□□□ 1.25
COPS7B-202ENST00000357490 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
COPS7B-202ENST00000357490 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
COPS7B-202ENST00000357490 RXRBP28702 533 aa22.83■■□□□ 1.25
COPS7B-202ENST00000357490 KIF1AQ12756 1690 aa22.83■■□□□ 1.24
COPS7B-202ENST00000357490 CDK12Q9NYV4 1490 aaPredicted RBP22.82■■□□□ 1.24
COPS7B-202ENST00000357490 C8orf37Q96NL8 207 aa22.81■■□□□ 1.24
COPS7B-202ENST00000357490 MARF1Q9Y4F3 1742 aaKnown RBP22.8■■□□□ 1.24
COPS7B-202ENST00000357490 RGPD8O14715 1765 aaPredicted RBP22.8■■□□□ 1.24
COPS7B-202ENST00000357490 PXDNQ92626 1479 aa22.79■■□□□ 1.24
COPS7B-202ENST00000357490 MINK1Q8N4C8 1332 aaPredicted RBP22.79■■□□□ 1.24
COPS7B-202ENST00000357490 HIRIP3Q9BW71 556 aaPredicted RBP22.78■■□□□ 1.24
COPS7B-202ENST00000357490 NGLY1Q96IV0 654 aa22.77■■□□□ 1.24
COPS7B-202ENST00000357490 CENPJQ9HC77 1338 aaPredicted RBP22.77■■□□□ 1.24
COPS7B-202ENST00000357490 FOXO3O43524 673 aa22.76■■□□□ 1.23
COPS7B-202ENST00000357490 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
COPS7B-202ENST00000357490 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
COPS7B-202ENST00000357490 QTRT2Q9H974 415 aaKnown RBP22.74■■□□□ 1.23
COPS7B-202ENST00000357490 RBM6P78332 1123 aaKnown RBP22.73■■□□□ 1.23
COPS7B-202ENST00000357490 EIF3AQ14152 1382 aaKnown RBP22.73■■□□□ 1.23
COPS7B-202ENST00000357490 QRICH2Q9H0J4 1663 aa22.72■■□□□ 1.23
COPS7B-202ENST00000357490 ADGRB2O60241 1585 aa22.71■■□□□ 1.23
COPS7B-202ENST00000357490 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
COPS7B-202ENST00000357490 WASLO00401 505 aaPredicted RBP22.69■■□□□ 1.22
COPS7B-202ENST00000357490 USP47Q96K76 1375 aa22.68■■□□□ 1.22
COPS7B-202ENST00000357490 ST20-MTHFSA0A0A6YYL1 179 aa22.68■■□□□ 1.22
COPS7B-202ENST00000357490 FNBP4Q8N3X1 1017 aaPredicted RBP22.68■■□□□ 1.22
COPS7B-202ENST00000357490 USP21Q9UK80 565 aa22.68■■□□□ 1.22
COPS7B-202ENST00000357490 RGS12O14924 1447 aa22.66■■□□□ 1.22
COPS7B-202ENST00000357490 UPF1Q92900 1129 aaKnown RBP eCLIP22.66■■□□□ 1.22
COPS7B-202ENST00000357490 CDK19Q9BWU1 502 aa22.66■■□□□ 1.22
COPS7B-202ENST00000357490 TRPC5Q9UL62 973 aaPredicted RBP22.66■■□□□ 1.22
COPS7B-202ENST00000357490 SPATA31A3Q5VYP0 1347 aa22.65■■□□□ 1.22
COPS7B-202ENST00000357490 PHF8Q9UPP1 1060 aa22.65■■□□□ 1.22
COPS7B-202ENST00000357490 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.65■■□□□ 1.22
COPS7B-202ENST00000357490 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
COPS7B-202ENST00000357490 USP32Q8NFA0 1604 aa22.64■■□□□ 1.22
COPS7B-202ENST00000357490 PSME1Q06323 249 aa22.64■■□□□ 1.21
COPS7B-202ENST00000357490 KRT28Q7Z3Y7 464 aa22.64■■□□□ 1.21
COPS7B-202ENST00000357490 PRR36Q9H6K5 1346 aa22.62■■□□□ 1.21
COPS7B-202ENST00000357490 TESK2Q96S53 571 aa22.62■■□□□ 1.21
COPS7B-202ENST00000357490 ATRNO75882 1429 aa22.62■■□□□ 1.21
COPS7B-202ENST00000357490 TNS3Q68CZ2 1445 aa22.62■■□□□ 1.21
COPS7B-202ENST00000357490 TULP4Q9NRJ4 1543 aa22.62■■□□□ 1.21
COPS7B-202ENST00000357490 SBNO2Q9Y2G9 1366 aa22.61■■□□□ 1.21
COPS7B-202ENST00000357490 EVC2Q86UK5 1308 aa22.6■■□□□ 1.21
COPS7B-202ENST00000357490 SRPK2P78362 688 aaKnown RBP22.6■■□□□ 1.21
COPS7B-202ENST00000357490 CABP2Q9NPB3 220 aa22.6■■□□□ 1.21
COPS7B-202ENST00000357490 EIF4G2P78344 907 aaKnown RBP eCLIP22.59■■□□□ 1.21
COPS7B-202ENST00000357490 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
COPS7B-202ENST00000357490 SBNO1A3KN83 1393 aa22.59■■□□□ 1.21
COPS7B-202ENST00000357490 ITSN1Q15811 1721 aa22.59■■□□□ 1.21
COPS7B-202ENST00000357490 ABCA3Q99758 1704 aa22.59■■□□□ 1.21
COPS7B-202ENST00000357490 BCL9LQ86UU0 1499 aa22.59■■□□□ 1.21
COPS7B-202ENST00000357490 HSPA5P11021 654 aaKnown RBP22.58■■□□□ 1.21
COPS7B-202ENST00000357490 ARHGEF10O15013 1369 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms